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Aliases for FAM182A Gene

Subcategory (RNA class) for FAM182A Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM182A Gene

  • Family With Sequence Similarity 182 Member A 2 3 5
  • Family With Sequence Similarity 182, Member A 2 3
  • C20orf91 3 4
  • Chromosome 20 Open Reading Frame 91 2
  • BB329D4.1 3

External Ids for FAM182A Gene

Previous HGNC Symbols for FAM182A Gene

  • C20orf91

Previous GeneCards Identifiers for FAM182A Gene

  • GC20P025988
  • GC20P025926

Summaries for FAM182A Gene

GeneCards Summary for FAM182A Gene

FAM182A (Family With Sequence Similarity 182 Member A) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM182A Gene

Genomics for FAM182A Gene

Regulatory Elements for FAM182A Gene

Enhancers for FAM182A Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FAM182A on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM182A Gene

Chromosome:
20
Start:
26,054,614 bp from pter
End:
26,086,917 bp from pter
Size:
32,304 bases
Orientation:
Plus strand

Genomic View for FAM182A Gene

Genes around FAM182A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM182A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM182A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM182A Gene

Proteins for FAM182A Gene

  • Protein details for FAM182A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T1J6-F182A_HUMAN
    Recommended name:
    Protein FAM182A
    Protein Accession:
    Q5T1J6
    Secondary Accessions:
    • A2RRD0
    • Q8N947

    Protein attributes for FAM182A Gene

    Size:
    154 amino acids
    Molecular mass:
    17173 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM182A Gene

Proteomics data for FAM182A Gene at MOPED

Post-translational modifications for FAM182A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FAM182A Gene

Domains & Families for FAM182A Gene

Protein Domains for FAM182A Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM182A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM182A: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FAM182A Gene

Function for FAM182A Gene

Phenotypes for FAM182A Gene

genes like me logo Genes that share phenotypes with FAM182A: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM182A Gene

Localization for FAM182A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM182A Gene COMPARTMENTS Subcellular localization image for FAM182A gene
Compartment Confidence
extracellular 2
cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FAM182A Gene

Pathways & Interactions for FAM182A Gene

SuperPathways for FAM182A Gene

No Data Available

Interacting Proteins for FAM182A Gene

Gene Ontology (GO) - Biological Process for FAM182A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM182A Gene

Drugs & Compounds for FAM182A Gene

No Compound Related Data Available

Transcripts for FAM182A Gene

Unigene Clusters for FAM182A Gene

Family with sequence similarity 182, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM182A Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6 ^ 7a · 7b
SP1: -
SP2:
SP3: - - - - - - -

Relevant External Links for FAM182A Gene

GeneLoc Exon Structure for
FAM182A
ECgene alternative splicing isoforms for
FAM182A

Expression for FAM182A Gene

mRNA expression in normal human tissues for FAM182A Gene

mRNA differential expression in normal tissues according to GTEx for FAM182A Gene

This gene is overexpressed in Testis (x5.0).

SOURCE GeneReport for Unigene cluster for FAM182A Gene Hs.516956

genes like me logo Genes that share expression patterns with FAM182A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM182A Gene

Orthologs for FAM182A Gene

Evolution for FAM182A Gene

ENSEMBL:
Gene Tree for FAM182A (if available)
TreeFam:
Gene Tree for FAM182A (if available)

No data available for Orthologs for FAM182A Gene

Paralogs for FAM182A Gene

(1) SIMAP similar genes for FAM182A Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for FAM182A Gene

genes like me logo Genes that share paralogs with FAM182A: view

No data available for Paralogs for FAM182A Gene

Variants for FAM182A Gene

Sequence variations from dbSNP and Humsavar for FAM182A Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs12758 -- 26,086,613(+) GGTTC(A/G)TCAAT nc-transcript-variant
rs1936198 -- 26,071,582(+) AAGAT(A/G)CAATA intron-variant
rs1937056 -- 26,083,381(+) GTTCT(C/T)TTGGG nc-transcript-variant
rs1970600 -- 26,065,988(+) cactt(C/G)aaccc intron-variant
rs2257426 -- 26,084,567(+) TGAAC(A/T)TCAGG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM182A Gene

Variant ID Type Subtype PubMed ID
nsv522873 CNV Gain 19592680
dgv1319e1 CNV Complex 17122850
esv363 CNV CNV 17122850
nsv470545 CNV Gain 18288195
nsv7340 OTHER Inversion 18451855
dgv1320e1 CNV Complex 17122850
esv25843 CNV Gain+Loss 19812545
nsv9797 CNV Loss 18304495
nsv821510 CNV Duplication 20802225
nsv9798 CNV Gain 18304495
dgv1321e1 CNV Complex 17122850
dgv1322e1 CNV Complex 17122850
essv21671 CNV CNV 17122850
esv2665127 CNV Deletion 23128226

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FAM182A Gene

Disorders for FAM182A Gene

Relevant External Links for FAM182A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM182A

No disorders were found for FAM182A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM182A Gene

Publications for FAM182A Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3

Products for FAM182A Gene

Sources for FAM182A Gene

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