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Aliases for FAM181A-AS1 Gene

Subcategory (RNA class) for FAM181A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM181A-AS1 Gene

  • FAM181A Antisense RNA 1 2 3 5
  • FAM181A Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 14 Open Reading Frame 86 2
  • C14orf86 3

External Ids for FAM181A-AS1 Gene

Previous HGNC Symbols for FAM181A-AS1 Gene

  • C14orf86

Previous GeneCards Identifiers for FAM181A-AS1 Gene

  • GC14M094372

Summaries for FAM181A-AS1 Gene

GeneCards Summary for FAM181A-AS1 Gene

FAM181A-AS1 (FAM181A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM181A-AS1 Gene

Genomics for FAM181A-AS1 Gene

Regulatory Elements for FAM181A-AS1 Gene

Enhancers for FAM181A-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G093953 2 FANTOM5 Ensembl ENCODE dbSUPER 4.9 -32.9 -32935 13.2 HDGF PKNOX1 FOXA2 MLX WRNIP1 ZFP64 SIN3A ARID4B FEZF1 DMAP1 SERPINA1 C14orf48 UBR7 IFI27L2 IFI27 RPSAP4 FAM181A-AS1 ASB2 DDX24 MIR4506
GH14G093329 1.3 ENCODE dbSUPER 5.1 +595.3 595254 5.4 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 BTBD7 UNC79 FAM181A-AS1 ENSG00000241499
GH14G093939 1.1 ENCODE dbSUPER 5.2 -12.6 -12644 0.4 CBX3 NFXL1 RAD21 ZNF143 CREM ZNF654 GATAD2B REST ATF4 MTA1 FAM181A-AS1 ENSG00000258987 MIR4506
GH14G093916 0.7 ENCODE 5.7 +10.2 10164 1.2 RFX1 FOXA2 MAX KLF4 REST FOXA1 JUND ATF3 ZBTB33 HNRNPL FAM181A FAM181A-AS1 ENSG00000279593
GH14G093951 0.5 dbSUPER 7.4 -24.9 -24939 1.9 ZNF585B GLIS1 SCRT2 ZIC2 ASB2 C14orf48 FAM181A-AS1 MIR4506
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM181A-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM181A-AS1 Gene

Chromosome:
14
Start:
93,904,730 bp from pter
End:
93,927,066 bp from pter
Size:
22,337 bases
Orientation:
Minus strand

Genomic View for FAM181A-AS1 Gene

Genes around FAM181A-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM181A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM181A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM181A-AS1 Gene

Proteins for FAM181A-AS1 Gene

Post-translational modifications for FAM181A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM181A-AS1 Gene

Domains & Families for FAM181A-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM181A-AS1 Gene

Function for FAM181A-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM181A-AS1 Gene

Localization for FAM181A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM181A-AS1 Gene

Pathways & Interactions for FAM181A-AS1 Gene

SuperPathways for FAM181A-AS1 Gene

No Data Available

Interacting Proteins for FAM181A-AS1 Gene

Gene Ontology (GO) - Biological Process for FAM181A-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM181A-AS1 Gene

Transcripts for FAM181A-AS1 Gene

mRNA/cDNA for FAM181A-AS1 Gene

(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM181A-AS1 Gene

FAM181A antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM181A-AS1 Gene

No ASD Table

Relevant External Links for FAM181A-AS1 Gene

GeneLoc Exon Structure for
FAM181A-AS1
ECgene alternative splicing isoforms for
FAM181A-AS1

Expression for FAM181A-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM181A-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FAM181A-AS1 Gene

This gene is overexpressed in Testis (x22.0) and Muscle - Skeletal (x9.5).

SOURCE GeneReport for Unigene cluster for FAM181A-AS1 Gene:

Hs.585648
genes like me logo Genes that share expression patterns with FAM181A-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM181A-AS1 Gene

Orthologs for FAM181A-AS1 Gene

Evolution for FAM181A-AS1 Gene

ENSEMBL:
Gene Tree for FAM181A-AS1 (if available)
TreeFam:
Gene Tree for FAM181A-AS1 (if available)

No data available for Orthologs for FAM181A-AS1 Gene

Paralogs for FAM181A-AS1 Gene

No data available for Paralogs for FAM181A-AS1 Gene

Variants for FAM181A-AS1 Gene

Sequence variations from dbSNP and Humsavar for FAM181A-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000016043 -- 93,914,083(+) ACCAC(G/T)ATCCC intron-variant
rs1000047764 -- 93,924,687(+) AATCT(A/C/G)GTCTT intron-variant
rs1000114239 -- 93,926,193(+) GAGGC(A/G)TGAAA intron-variant, upstream-variant-2KB
rs1000151128 -- 93,918,386(+) TCTTG(C/G)CTCTG intron-variant, upstream-variant-2KB
rs1000181443 -- 93,910,526(+) ACTCA(A/T)CCCAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM181A-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3635371 CNV loss 21293372
esv3635372 CNV loss 21293372
nsv521206 CNV loss 19592680
nsv832861 CNV loss 17160897

Relevant External Links for FAM181A-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM181A-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM181A-AS1 Gene

Disorders for FAM181A-AS1 Gene

Relevant External Links for FAM181A-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM181A-AS1

No disorders were found for FAM181A-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM181A-AS1 Gene

Publications for FAM181A-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FAM181A-AS1 Gene

Sources for FAM181A-AS1 Gene

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