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Aliases for FAM174A Gene

Aliases for FAM174A Gene

  • Family With Sequence Similarity 174, Member A 2 3
  • Transmembrane Protein 157 2 3 4
  • Hepatitis C Virus NS5A-Transactivated Protein 6 3 4
  • HCV NS5A-Transactivated Protein 6 3 4
  • TMEM157 3 4
  • Membrane Protein FAM174A 3
  • HGS_RE408 3
  • UNQ1912 3
  • NS5ATP6 4

External Ids for FAM174A Gene

Previous Symbols for FAM174A Gene

  • TMEM157

Summaries for FAM174A Gene

GeneCards Summary for FAM174A Gene

FAM174A (Family With Sequence Similarity 174, Member A) is a Protein Coding gene. Diseases associated with FAM174A include hepatitis c and hepatitis c virus.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM174A Gene

Genomics for FAM174A Gene

Genomic Location for FAM174A Gene

Start:
100,535,305 bp from pter
End:
100,586,741 bp from pter
Size:
51,437 bases
Orientation:
Plus strand

Genomic View for FAM174A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM174A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM174A Gene

Regulatory Elements for FAM174A Gene

Proteins for FAM174A Gene

  • Protein details for FAM174A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TBP5-F174A_HUMAN
    Recommended name:
    Membrane protein FAM174A
    Protein Accession:
    Q8TBP5
    Secondary Accessions:
    • A8K0H4

    Protein attributes for FAM174A Gene

    Size:
    190 amino acids
    Molecular mass:
    19954 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM174A Gene

Proteomics data for FAM174A Gene at MOPED

Post-translational modifications for FAM174A Gene

  • Modification sites at PhosphoSitePlus
  • Glycosylation at Thr52, Thr61, and Asn83

Other Protein References for FAM174A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM174A Gene

Domains for FAM174A Gene

Protein Domains for FAM174A Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM174A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8TBP5

UniProtKB/Swiss-Prot:

F174A_HUMAN
Family:
  • Belongs to the FAM174 family.:
    • Q8TBP5
genes like me logo Genes that share domains with FAM174A: view

No data available for Gene Families for FAM174A Gene

Function for FAM174A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM174A Gene

Localization for FAM174A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM174A Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM174A Gene COMPARTMENTS Subcellular localization image for FAM174A gene
Compartment Confidence
extracellular 3
plasma membrane 2
cytosol 1
golgi apparatus 1

Gene Ontology (GO) - Cellular Components for FAM174A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM174A: view

Pathways for FAM174A Gene

SuperPathways for FAM174A Gene

No Data Available

Interacting Proteins for FAM174A Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000307954%0d%0a9606.ENSP00000337825%0d%0a
Selected Interacting proteins: ENSP00000307954 for FAM174A Gene via STRING

Symbol External ID(s) Details
LCK

Gene Ontology (GO) - Biological Process for FAM174A Gene

None

No data available for Pathways by source for FAM174A Gene

Transcripts for FAM174A Gene

mRNA/cDNA for FAM174A Gene

Unigene Clusters for FAM174A Gene

Family with sequence similarity 174, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM174A Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b
SP1:
SP2: -

Relevant External Links for FAM174A Gene

GeneLoc Exon Structure for
FAM174A
ECgene alternative splicing isoforms for
FAM174A

Expression for FAM174A Gene

mRNA expression in normal human tissues for FAM174A Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for FAM174A Gene

SOURCE GeneReport for Unigene cluster for FAM174A Gene Hs.356108

genes like me logo Genes that share expressions with FAM174A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM174A Gene

Orthologs for FAM174A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM174A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM174A 35
  • 99.47 (n)
  • 99.47 (a)
TMEM157 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM174A 36
  • 75 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM174A 35
  • 86.09 (n)
  • 87.05 (a)
FAM174A 36
  • 75 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam174a 35
  • 84.9 (n)
  • 80.47 (a)
Fam174a 16
Fam174a 36
  • 68 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM174A 36
  • 53 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam174a 35
  • 84.9 (n)
  • 81.25 (a)
chicken
(Gallus gallus)
Aves FAM174A 35
  • 64.44 (n)
  • 62.86 (a)
FAM174A 36
  • 45 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM174A 36
  • 51 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.7683 35
tropical clawed frog
(Silurana tropicalis)
Amphibia fam174 35
  • 60.19 (n)
  • 61.17 (a)
Species with no ortholog for FAM174A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM174A Gene

ENSEMBL:
Gene Tree for FAM174A (if available)
TreeFam:
Gene Tree for FAM174A (if available)

Paralogs for FAM174A Gene

No data available for Paralogs for FAM174A Gene

Variants for FAM174A Gene

Sequence variations from dbSNP and Humsavar for FAM174A Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs13876 -- 100,586,377(+) ACTCT(A/G)TTAAT utr-variant-3-prime
rs26026 -- 100,547,873(-) CTAGG(A/C)CTATT intron-variant
rs26027 -- 100,546,715(-) GTATA(A/G)TGCAT intron-variant
rs26028 -- 100,546,437(-) TCATA(C/T)GGTAG intron-variant
rs26029 -- 100,543,263(-) gcgtg(A/C)gcctg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM174A Gene

Variant ID Type Subtype PubMed ID
esv730 CNV CNV 17122850
dgv1826e1 CNV Complex 17122850
nsv882461 CNV Loss 21882294
nsv882462 CNV Loss 21882294
dgv6235n71 CNV Loss 21882294
nsv818363 CNV Gain 17921354
nsv823158 CNV Loss 20364138

Relevant External Links for FAM174A Gene

HapMap Linkage Disequilibrium report
FAM174A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM174A Gene

Disorders for FAM174A Gene

Relevant External Links for FAM174A

Genetic Association Database (GAD)
FAM174A
Human Genome Epidemiology (HuGE) Navigator
FAM174A
genes like me logo Genes that share disorders with FAM174A: view

No data available for UniProtKB/Swiss-Prot for FAM174A Gene

Publications for FAM174A Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Insights into human Lck SH3 domain binding specificity: different binding modes of artificial and native ligands. (PMID: 16274251) Tran T. … Willbold D. (Biochemistry 2005) 3
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 48
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 48

Products for FAM174A Gene

Sources for FAM174A Gene

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