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Aliases for FAM171A2 Gene

Aliases for FAM171A2 Gene

  • Family With Sequence Similarity 171, Member A2 2 3

External Ids for FAM171A2 Gene

Previous GeneCards Identifiers for FAM171A2 Gene

  • GC17M039788
  • GC17M042430
  • GC17M038196

Summaries for FAM171A2 Gene

GeneCards Summary for FAM171A2 Gene

FAM171A2 (Family With Sequence Similarity 171, Member A2) is a Protein Coding gene. An important paralog of this gene is FAM171A1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM171A2 Gene

Genomics for FAM171A2 Gene

Regulatory Elements for FAM171A2 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for FAM171A2 Gene

44,353,215 bp from pter
44,363,875 bp from pter
10,661 bases
Minus strand

Genomic View for FAM171A2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM171A2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM171A2 Gene

Proteins for FAM171A2 Gene

  • Protein details for FAM171A2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein FAM171A2
    Protein Accession:
    Secondary Accessions:
    • A8MQB4

    Protein attributes for FAM171A2 Gene

    826 amino acids
    Molecular mass:
    87435 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM171A2 Gene

Proteomics data for FAM171A2 Gene at MOPED

Post-translational modifications for FAM171A2 Gene

  • Ubiquitination at Lys 258
  • Glycosylation at Asn 66, Asn 201, Asn 221, and Asn 265
  • Modification sites at PhosphoSitePlus

Other Protein References for FAM171A2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM171A2 Gene

Domains & Families for FAM171A2 Gene

Protein Domains for FAM171A2 Gene


Suggested Antigen Peptide Sequences for FAM171A2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



F1712_HUMAN :
  • Belongs to the FAM171 family.
  • Belongs to the FAM171 family.
genes like me logo Genes that share domains with FAM171A2: view

No data available for Gene Families for FAM171A2 Gene

Function for FAM171A2 Gene

Phenotypes for FAM171A2 Gene

GenomeRNAi human phenotypes for FAM171A2:
genes like me logo Genes that share phenotypes with FAM171A2: view

Animal Model Products

CRISPR Products

miRNA for FAM171A2 Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM171A2

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targets and HOMER Transcription for FAM171A2 Gene

Localization for FAM171A2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM171A2 Gene

Membrane; Single-pass type I membrane protein.

Gene Ontology (GO) - Cellular Components for FAM171A2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM171A2: view

No data available for Subcellular locations from COMPARTMENTS for FAM171A2 Gene

Pathways & Interactions for FAM171A2 Gene

SuperPathways for FAM171A2 Gene

No Data Available

Interacting Proteins for FAM171A2 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
Selected Interacting proteins: ENSP00000293443 for FAM171A2 Gene via STRING

Gene Ontology (GO) - Biological Process for FAM171A2 Gene


No data available for Pathways by source and SIGNOR curated interactions for FAM171A2 Gene

Drugs & Compounds for FAM171A2 Gene

No Compound Related Data Available

Transcripts for FAM171A2 Gene

mRNA/cDNA for FAM171A2 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM171A2 Gene

Family with sequence similarity 171, member A2:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM171A2

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM171A2 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9
SP1: - -
SP2: -
SP4: -

Relevant External Links for FAM171A2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM171A2 Gene

mRNA expression in normal human tissues for FAM171A2 Gene

mRNA differential expression in normal tissues according to GTEx for FAM171A2 Gene

This gene is overexpressed in Brain - Cortex (x5.6), Brain - Frontal Cortex (BA9) (x4.7), Brain - Anterior cingulate cortex (BA24) (x4.4), and Brain - Cerebellum (x4.0).

Protein differential expression in normal tissues from HIPED for FAM171A2 Gene

This gene is overexpressed in Fetal Brain (46.5) and Retina (12.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for FAM171A2 Gene

SOURCE GeneReport for Unigene cluster for FAM171A2 Gene Hs.154001

genes like me logo Genes that share expression patterns with FAM171A2: view

Protein tissue co-expression partners for FAM171A2 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for FAM171A2 Gene

Orthologs for FAM171A2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM171A2 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia FAM171A2 35
  • 91.39 (n)
  • 92.55 (a)
FAM171A2 36
  • 92 (a)
(Canis familiaris)
Mammalia FAM171A2 35
  • 91.11 (n)
  • 93.58 (a)
FAM171A2 36
  • 88 (a)
(Mus musculus)
Mammalia Fam171a2 35
  • 87.59 (n)
  • 92.21 (a)
Fam171a2 16
Fam171a2 36
  • 92 (a)
(Pan troglodytes)
Mammalia FAM171A2 35
  • 98.6 (n)
  • 98.01 (a)
FAM171A2 36
  • 93 (a)
(Rattus norvegicus)
Mammalia Fam171a2 35
  • 87.31 (n)
  • 92.34 (a)
(Monodelphis domestica)
Mammalia FAM171A2 36
  • 81 (a)
(Ornithorhynchus anatinus)
Mammalia FAM171A2 36
  • 70 (a)
(Anolis carolinensis)
Reptilia FAM171A2 36
  • 63 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia fam171a2 35
  • 60.07 (n)
  • 61.61 (a)
Str.5450 35
African clawed frog
(Xenopus laevis)
Amphibia Xl.11903 35
(Danio rerio)
Actinopterygii LOC556398 35
  • 53.78 (n)
  • 48.49 (a)
fam171a2 36
  • 42 (a)
FAM171A2 (2 of 2) 36
  • 40 (a)
Species with no ortholog for FAM171A2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM171A2 Gene

Gene Tree for FAM171A2 (if available)
Gene Tree for FAM171A2 (if available)

Paralogs for FAM171A2 Gene

Paralogs for FAM171A2 Gene

(2) SIMAP similar genes for FAM171A2 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with FAM171A2: view

Variants for FAM171A2 Gene

Sequence variations from dbSNP and Humsavar for FAM171A2 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs708382 -- 44,364,976(-) AATGA(A/G)GTGGA upstream-variant-2KB
rs708383 -- 44,360,386(-) TAGCC(C/T)GAGTT intron-variant
rs708384 -- 44,360,314(-) CCTCC(G/T)GCATG intron-variant
rs850738 -- 44,357,262(-) tcaag(C/T)gattc intron-variant
rs2023189 -- 44,358,499(-) GCCAG(A/G)CTAGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM171A2 Gene

Variant ID Type Subtype PubMed ID
nsv908270 CNV Loss 21882294
dgv3175n71 CNV Loss 21882294
dgv3176n71 CNV Loss 21882294
esv26446 CNV Loss 19812545

Variation tolerance for FAM171A2 Gene

Gene Damage Index Score: 4.78; 66.75% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FAM171A2 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM171A2 Gene

Disorders for FAM171A2 Gene

Relevant External Links for FAM171A2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with FAM171A2: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM171A2 Gene

Publications for FAM171A2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 67
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 67
  4. New gene functions in megakaryopoiesis and platelet formation. (PMID: 22139419) Gieger C. … Soranzo N. (Nature 2011) 67
  5. Mass-spectrometric identification and relative quantification of N- linked cell surface glycoproteins. (PMID: 19349973) Wollscheid B. … Watts J.D. (Nat. Biotechnol. 2009) 67

Products for FAM171A2 Gene

Sources for FAM171A2 Gene

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