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Aliases for FAM170B-AS1 Gene

Subcategory (RNA class) for FAM170B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM170B-AS1 Gene

  • FAM170B Antisense RNA 1 2 3 5

External Ids for FAM170B-AS1 Gene

Previous GeneCards Identifiers for FAM170B-AS1 Gene

  • GC10P050331

Summaries for FAM170B-AS1 Gene

GeneCards Summary for FAM170B-AS1 Gene

FAM170B-AS1 (FAM170B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM170B-AS1 Gene

Genomics for FAM170B-AS1 Gene

Genomic Location for FAM170B-AS1 Gene

Chromosome:
10
Start:
49,121,839 bp from pter
End:
49,151,547 bp from pter
Size:
29,709 bases
Orientation:
Plus strand

Genomic View for FAM170B-AS1 Gene

Genes around FAM170B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM170B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM170B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM170B-AS1 Gene

No data available for Regulatory Elements for FAM170B-AS1 Gene

Proteins for FAM170B-AS1 Gene

Post-translational modifications for FAM170B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM170B-AS1 Gene

Domains & Families for FAM170B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM170B-AS1 Gene

Function for FAM170B-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM170B-AS1 Gene

Localization for FAM170B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM170B-AS1 Gene

Pathways & Interactions for FAM170B-AS1 Gene

SuperPathways for FAM170B-AS1 Gene

No Data Available

Interacting Proteins for FAM170B-AS1 Gene

Gene Ontology (GO) - Biological Process for FAM170B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM170B-AS1 Gene

Drugs & Compounds for FAM170B-AS1 Gene

No Compound Related Data Available

Transcripts for FAM170B-AS1 Gene

mRNA/cDNA for FAM170B-AS1 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM170B-AS1 Gene

FAM170B antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM170B-AS1 Gene

No ASD Table

Relevant External Links for FAM170B-AS1 Gene

GeneLoc Exon Structure for
FAM170B-AS1
ECgene alternative splicing isoforms for
FAM170B-AS1

Expression for FAM170B-AS1 Gene

mRNA expression in normal human tissues for FAM170B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FAM170B-AS1 Gene

This gene is overexpressed in Testis (x46.6).

SOURCE GeneReport for Unigene cluster for FAM170B-AS1 Gene Hs.404175

genes like me logo Genes that share expression patterns with FAM170B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM170B-AS1 Gene

Orthologs for FAM170B-AS1 Gene

Evolution for FAM170B-AS1 Gene

ENSEMBL:
Gene Tree for FAM170B-AS1 (if available)
TreeFam:
Gene Tree for FAM170B-AS1 (if available)

No data available for Orthologs for FAM170B-AS1 Gene

Paralogs for FAM170B-AS1 Gene

No data available for Paralogs for FAM170B-AS1 Gene

Variants for FAM170B-AS1 Gene

Sequence variations from dbSNP and Humsavar for FAM170B-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs2490838 -- 49,149,153(-) aagtt(C/T)gtgga intron-variant
rs2377981 -- 49,142,138(+) TCCCA(C/T)AGGAG intron-variant
rs2377982 -- 49,143,839(+) TTGTG(C/T)AAGAA intron-variant
rs2377983 -- 49,144,675(+) AGCAG(A/T)TGATT intron-variant
rs2377984 -- 49,147,256(+) TGCCC(C/T)GGCAG intron-variant

Relevant External Links for FAM170B-AS1 Gene

HapMap Linkage Disequilibrium report
FAM170B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM170B-AS1 Gene

Disorders for FAM170B-AS1 Gene

Relevant External Links for FAM170B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM170B-AS1

No disorders were found for FAM170B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM170B-AS1 Gene

Publications for FAM170B-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM170B-AS1 Gene

Sources for FAM170B-AS1 Gene

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