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Aliases for FAM167A-AS1 Gene

Subcategory (RNA class) for FAM167A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM167A-AS1 Gene

  • FAM167A Antisense RNA 1 2 3 4 5
  • C8orf12 3 4
  • Chromosome 8 Open Reading Frame 12 2
  • FAM167A Antisense Gene Protein 1 4

External Ids for FAM167A-AS1 Gene

Previous HGNC Symbols for FAM167A-AS1 Gene

  • C8orf12

Summaries for FAM167A-AS1 Gene

GeneCards Summary for FAM167A-AS1 Gene

FAM167A-AS1 (FAM167A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with FAM167A-AS1 include keratolytic winter erythema.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM167A-AS1 Gene

Genomics for FAM167A-AS1 Gene

Genomic Location for FAM167A-AS1 Gene

Chromosome:
8
Start:
11,368,402 bp from pter
End:
11,438,658 bp from pter
Size:
70,257 bases
Orientation:
Plus strand

Genomic View for FAM167A-AS1 Gene

Genes around FAM167A-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM167A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM167A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM167A-AS1 Gene

No data available for Regulatory Elements for FAM167A-AS1 Gene

Proteins for FAM167A-AS1 Gene

  • Protein details for FAM167A-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96KT0-FAAS1_HUMAN
    Recommended name:
    Uncharacterized protein FAM167A-AS1
    Protein Accession:
    Q96KT0

    Protein attributes for FAM167A-AS1 Gene

    Size:
    104 amino acids
    Molecular mass:
    11632 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM167A-AS1 Gene

Proteomics data for FAM167A-AS1 Gene at MOPED

Post-translational modifications for FAM167A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM167A-AS1 Gene

Domains & Families for FAM167A-AS1 Gene

Protein Domains for FAM167A-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM167A-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM167A-AS1 Gene

Function for FAM167A-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM167A-AS1 Gene

Localization for FAM167A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM167A-AS1 Gene

Pathways & Interactions for FAM167A-AS1 Gene

SuperPathways for FAM167A-AS1 Gene

No Data Available

Interacting Proteins for FAM167A-AS1 Gene

Gene Ontology (GO) - Biological Process for FAM167A-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM167A-AS1 Gene

Drugs & Compounds for FAM167A-AS1 Gene

No Compound Related Data Available

Transcripts for FAM167A-AS1 Gene

mRNA/cDNA for FAM167A-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for FAM167A-AS1 Gene

No ASD Table

Relevant External Links for FAM167A-AS1 Gene

GeneLoc Exon Structure for
FAM167A-AS1
ECgene alternative splicing isoforms for
FAM167A-AS1

Expression for FAM167A-AS1 Gene

mRNA expression in normal human tissues for FAM167A-AS1 Gene

genes like me logo Genes that share expression patterns with FAM167A-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM167A-AS1 Gene

Orthologs for FAM167A-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM167A-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C8orf12 36
  • 98 (a)
OneToOne
Species with no ortholog for FAM167A-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM167A-AS1 Gene

ENSEMBL:
Gene Tree for FAM167A-AS1 (if available)
TreeFam:
Gene Tree for FAM167A-AS1 (if available)

Paralogs for FAM167A-AS1 Gene

No data available for Paralogs for FAM167A-AS1 Gene

Variants for FAM167A-AS1 Gene

Sequence variations from dbSNP and Humsavar for FAM167A-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs892794 -- 11,388,954(-) ATGTT(C/G)GCTAC intron-variant
rs892795 -- 11,388,462(-) CATCG(C/T)GGTTC intron-variant
rs892796 -- 11,388,354(-) TGGGC(A/G)TTTGG intron-variant
rs1594967 -- 11,380,823(-) aaaca(A/C)ccaag intron-variant
rs1594968 -- 11,379,821(-) ggaga(C/G)agcag intron-variant

Variation tolerance for FAM167A-AS1 Gene

Gene Damage Index Score: 3.18; 51.89% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FAM167A-AS1 Gene

HapMap Linkage Disequilibrium report
FAM167A-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM167A-AS1 Gene

Disorders for FAM167A-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for FAM167A-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
keratolytic winter erythema
  • erythrokeratolysis hiemalis ichthyosis
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for FAM167A-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM167A-AS1
genes like me logo Genes that share disorders with FAM167A-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for FAM167A-AS1 Gene

Publications for FAM167A-AS1 Gene

  1. Common genetic variation and performance on standardized cognitive tests. (PMID: 20125193) Cirulli E.T. … Goldstein D.B. (Eur. J. Hum. Genet. 2010) 3 67
  2. Physical and transcriptional map of the critical region for keratolytic winter erythema (KWE) on chromosome 8p22-p23 between D8S550 and D8S1759. (PMID: 11896452) Appel S. … Rosenthal A. (Eur. J. Hum. Genet. 2002) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM167A-AS1 Gene

Sources for FAM167A-AS1 Gene

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