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Aliases for FAM167A-AS1 Gene

Subcategory (RNA class) for FAM167A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM167A-AS1 Gene

  • FAM167A Antisense RNA 1 2 3 4
  • C8orf12 3 4
  • Chromosome 8 Open Reading Frame 12 2
  • FAM167A Antisense Gene Protein 1 4

External Ids for FAM167A-AS1 Gene

Previous HGNC Symbols for FAM167A-AS1 Gene

  • C8orf12

Summaries for FAM167A-AS1 Gene

GeneCards Summary for FAM167A-AS1 Gene

FAM167A-AS1 (FAM167A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM167A-AS1 Gene

Genomics for FAM167A-AS1 Gene

Genomic Location for FAM167A-AS1 Gene

Start:
11,368,402 bp from pter
End:
11,438,658 bp from pter
Size:
70,257 bases
Orientation:
Plus strand

Genomic View for FAM167A-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM167A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM167A-AS1 Gene

No data available for Regulatory Elements for FAM167A-AS1 Gene

Proteins for FAM167A-AS1 Gene

  • Protein details for FAM167A-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96KT0-FAAS1_HUMAN
    Recommended name:
    Uncharacterized protein FAM167A-AS1
    Protein Accession:
    Q96KT0
    Secondary Accessions:

    Protein attributes for FAM167A-AS1 Gene

    Size:
    104 amino acids
    Molecular mass:
    11632 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM167A-AS1 Gene

Proteomics data for FAM167A-AS1 Gene at MOPED

Post-translational modifications for FAM167A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM167A-AS1 Gene

Domains for FAM167A-AS1 Gene

Protein Domains for FAM167A-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM167A-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM167A-AS1 Gene

Function for FAM167A-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM167A-AS1 Gene

Localization for FAM167A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM167A-AS1 Gene

Pathways for FAM167A-AS1 Gene

SuperPathways for FAM167A-AS1 Gene

No Data Available

Interacting Proteins for FAM167A-AS1 Gene

Gene Ontology (GO) - Biological Process for FAM167A-AS1 Gene

None

No data available for Pathways by source for FAM167A-AS1 Gene

Transcripts for FAM167A-AS1 Gene

mRNA/cDNA for FAM167A-AS1 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM167A-AS1
    • Block miRNA regulation of FAM167A-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM167A-AS1

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for FAM167A-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for FAM167A-AS1 Gene

    No ASD Table

    Relevant External Links for FAM167A-AS1 Gene

    GeneLoc Exon Structure for
    FAM167A-AS1
    ECgene alternative splicing isoforms for
    FAM167A-AS1

    Expression for FAM167A-AS1 Gene

    mRNA expression in normal human tissues for FAM167A-AS1 Gene

    genes like me logo Genes that share expressions with FAM167A-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FAM167A-AS1 Gene

    Orthologs for FAM167A-AS1 Gene

    This gene was present in the common ancestor of human and chimp.

    Orthologs for FAM167A-AS1 Gene

    Organism Taxonomy Gene Similarity Type Details
    chimpanzee
    (Pan troglodytes)
    Mammalia C8orf12 36
    • 98 (a)
    OneToOne
    Species with no ortholog for FAM167A-AS1:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • dog (Canis familiaris)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • mouse (Mus musculus)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for FAM167A-AS1 Gene

    ENSEMBL:
    Gene Tree for FAM167A-AS1 (if available)
    TreeFam:
    Gene Tree for FAM167A-AS1 (if available)

    Paralogs for FAM167A-AS1 Gene

    No data available for Paralogs for FAM167A-AS1 Gene

    Variants for FAM167A-AS1 Gene

    Sequence variations from dbSNP and Humsavar for FAM167A-AS1 Gene

    SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
    rs892794 -- 11,388,954(-) ATGTT(C/G)GCTAC intron-variant
    rs892795 -- 11,388,462(-) CATCG(C/T)GGTTC intron-variant
    rs892796 -- 11,388,354(-) TGGGC(A/G)TTTGG intron-variant
    rs1435274 -- 11,378,401(-) TAACA(C/T)AGGCT intron-variant
    rs1435275 -- 11,378,226(-) CCATC(A/G)TAAGT intron-variant

    Relevant External Links for FAM167A-AS1 Gene

    HapMap Linkage Disequilibrium report
    FAM167A-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM167A-AS1 Gene

    Disorders for FAM167A-AS1 Gene

    No disorders were found for FAM167A-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for FAM167A-AS1 Gene

    Publications for FAM167A-AS1 Gene

    1. Physical and transcriptional map of the critical region for keratolytic winter erythema (KWE) on chromosome 8p22-p23 between D8S550 and D8S1759. (PMID: 11896452) Appel S. … Rosenthal A. (Eur. J. Hum. Genet. 2002) 3
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    3. Common genetic variation and performance on standardized cognitive tests. (PMID: 20125193) Cirulli E.T. … Goldstein D.B. (Eur. J. Hum. Genet. 2010) 3
    4. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4

    Products for FAM167A-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM167A-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for FAM167A-AS1
      • Block miRNA regulation of FAM167A-AS1 using miScript Target Protectors

      Sources for FAM167A-AS1 Gene

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