Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM166B Gene

Aliases for FAM166B Gene

  • Family With Sequence Similarity 166, Member B 2 3

External Ids for FAM166B Gene

Summaries for FAM166B Gene

GeneCards Summary for FAM166B Gene

FAM166B (Family With Sequence Similarity 166, Member B) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM166B Gene

Genomics for FAM166B Gene

Regulatory Elements for FAM166B Gene

Genomic Location for FAM166B Gene

Start:
35,561,830 bp from pter
End:
35,563,899 bp from pter
Size:
2,070 bases
Orientation:
Minus strand

Genomic View for FAM166B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM166B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM166B Gene

Proteins for FAM166B Gene

  • Protein details for FAM166B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MTA8-F166B_HUMAN
    Recommended name:
    Protein FAM166B
    Protein Accession:
    A8MTA8
    Secondary Accessions:
    • A1L3B2
    • B7ZBJ0

    Protein attributes for FAM166B Gene

    Size:
    275 amino acids
    Molecular mass:
    30575 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for FAM166B Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FAM166B Gene

Proteomics data for FAM166B Gene at MOPED

Post-translational modifications for FAM166B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM166B Gene

No data available for DME Specific Peptides for FAM166B Gene

Domains for FAM166B Gene

Protein Domains for FAM166B Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM166B Gene

Graphical View of Domain Structure for InterPro Entry

A8MTA8

UniProtKB/Swiss-Prot:

F166B_HUMAN :
  • A8MTA8
Family:
  • Belongs to the UPF0605 family.
genes like me logo Genes that share domains with FAM166B: view

No data available for Gene Families for FAM166B Gene

Function for FAM166B Gene

Phenotypes for FAM166B Gene

GenomeRNAi human phenotypes for FAM166B:
genes like me logo Genes that share phenotypes with FAM166B: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM166B Gene

Localization for FAM166B Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM166B Gene COMPARTMENTS Subcellular localization image for FAM166B gene
Compartment Confidence
mitochondrion 2
cytosol 1
extracellular 1
nucleus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FAM166B Gene

Pathways for FAM166B Gene

SuperPathways for FAM166B Gene

No Data Available

Interacting Proteins for FAM166B Gene

Gene Ontology (GO) - Biological Process for FAM166B Gene

None

No data available for Pathways by source for FAM166B Gene

Transcripts for FAM166B Gene

mRNA/cDNA for FAM166B Gene

(5) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM166B Gene

Family with sequence similarity 166, member B:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM166B

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for FAM166B
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM166B Gene

No ASD Table

Relevant External Links for FAM166B Gene

GeneLoc Exon Structure for
FAM166B
ECgene alternative splicing isoforms for
FAM166B

Expression for FAM166B Gene

mRNA expression in normal human tissues for FAM166B Gene

mRNA differential expression in normal tissues according to GTEx for FAM166B Gene

This gene is overexpressed in Adrenal Gland (30.1) and Muscle - Skeletal (13.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for FAM166B Gene

SOURCE GeneReport for Unigene cluster for FAM166B Gene Hs.98959

genes like me logo Genes that share expressions with FAM166B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for FAM166B Gene

Orthologs for FAM166B Gene

This gene was present in the common ancestor of animals.

Orthologs for FAM166B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM166B 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM166B 35
  • 84.86 (n)
  • 81.32 (a)
FAM166B 36
  • 80 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM166B 35
  • 84.61 (n)
  • 81.09 (a)
FAM166B 36
  • 69 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam166b 35
  • 81.15 (n)
  • 74.59 (a)
Fam166b 16
Fam166b 36
  • 42 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM166B 36
  • 54 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM166B 36
  • 48 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam166b 35
  • 78.35 (n)
  • 74.68 (a)
lizard
(Anolis carolinensis)
Reptilia FAM166B 36
  • 37 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii fam166b 36
  • 36 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG18335 36
  • 25 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 27 (a)
OneToMany
-- 36
  • 25 (a)
OneToMany
Species with no ortholog for FAM166B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM166B Gene

ENSEMBL:
Gene Tree for FAM166B (if available)
TreeFam:
Gene Tree for FAM166B (if available)

Paralogs for FAM166B Gene

No data available for Paralogs for FAM166B Gene

Variants for FAM166B Gene

Sequence variations from dbSNP and Humsavar for FAM166B Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs755774 -- 35,562,552(-) CCCTG(C/T)GCCCG intron-variant, reference, synonymous-codon
rs3068510 -- 35,562,403(+) GTTAG(-/TTAG)GTAAA reference, frameshift-variant
rs34170178 -- 35,565,708(+) CCCTT(-/T)AATCC upstream-variant-2KB
rs58086772 -- 35,564,061(+) CGAAG(-/GAAG)CCCTG upstream-variant-2KB
rs59406432 -- 35,564,657(+) GGGCC(A/G)GGTGC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM166B Gene

Variant ID Type Subtype PubMed ID
nsv527028 CNV Loss 19592680
nsv528256 CNV Loss 19592680

Relevant External Links for FAM166B Gene

HapMap Linkage Disequilibrium report
FAM166B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM166B Gene

Disorders for FAM166B Gene

No disorders were found for FAM166B Gene.

No data available for UniProtKB/Swiss-Prot for FAM166B Gene

Publications for FAM166B Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for FAM166B Gene

Sources for FAM166B Gene

Back to Top

Content