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Aliases for FAM157C Gene

Subcategory (RNA class) for FAM157C Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM157C Gene

  • Family With Sequence Similarity 157 Member C 2 3 5
  • Family With Sequence Similarity 157, Member C 2

External Ids for FAM157C Gene

Previous GeneCards Identifiers for FAM157C Gene

  • GC16P088695
  • GC16P090167

Summaries for FAM157C Gene

GeneCards Summary for FAM157C Gene

FAM157C (Family With Sequence Similarity 157 Member C) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM157C Gene

Genomics for FAM157C Gene

Regulatory Elements for FAM157C Gene

Enhancers for FAM157C Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F090081 1 Ensembl ENCODE 15.2 -19.9 -19888 1.6 CREB3L1 ARID4B SIN3A ZNF2 YY1 ZNF143 DEK ZNF263 SP3 SP5 ENSG00000261172 FAM157C DEF8 CDK10 ENSG00000259877 TUBB8P7 FANCA PRDM7 URAHP
GH16F090018 0.9 FANTOM5 ENCODE 11.8 -81.2 -81159 5.3 PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FOS DBNDD1 DEF8 PRDM7 GAS8 FAM157C ENSG00000261172 URAHP GAS8-AS1 TUBB3 ENSG00000283182
GH16F089717 0.4 ENCODE 11.6 -381.2 -381211 7.5 PKNOX1 ARNT CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF143 CDK10 VPS9D1 DBNDD1 VPS9D1-AS1 AFG3L1P TUBB3 ENSG00000259877 FAM157C FANCA ENSG00000261172
GH16F089385 1.1 Ensembl ENCODE 11.6 -715.2 -715164 3.4 CTCF ATF1 TBL1XR1 ZBTB40 ZNF121 GLIS2 NR2F6 ZNF600 CREM ZNF263 RNU6-430P FAM157C ENSG00000261172 CDK10 ANKRD11 ACSF3 ENSG00000259877 PIR42684 PIR55522
GH16F089378 1.3 FANTOM5 Ensembl ENCODE 11.6 -720.4 -720389 6.6 HDGF ARID4B SIN3A ZNF48 ZNF121 GATA2 ZNF207 ZNF263 SP5 MXD4 LOC101927863 AFG3L1P SPG7 MC1R ENSG00000259877 URAHP LOC100128882 RNU6-430P CTU2 FAM157C
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAM157C on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM157C Gene

Chromosome:
16
Start:
90,102,264 bp from pter
End:
90,186,204 bp from pter
Size:
83,941 bases
Orientation:
Plus strand

Genomic View for FAM157C Gene

Genes around FAM157C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM157C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM157C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM157C Gene

Proteins for FAM157C Gene

  • Protein details for FAM157C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CG43-F157C_HUMAN
    Recommended name:
    Putative protein FAM157C
    Protein Accession:
    P0CG43

    Protein attributes for FAM157C Gene

    Size:
    387 amino acids
    Molecular mass:
    43408 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM157C Gene

Post-translational modifications for FAM157C Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM157C Gene

Domains & Families for FAM157C Gene

Protein Domains for FAM157C Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM157C Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0CG43

UniProtKB/Swiss-Prot:

F157C_HUMAN :
  • Belongs to the FAM157 family.
Family:
  • Belongs to the FAM157 family.
genes like me logo Genes that share domains with FAM157C: view

No data available for Gene Families for FAM157C Gene

Function for FAM157C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM157C Gene

Localization for FAM157C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM157C Gene

Pathways & Interactions for FAM157C Gene

SuperPathways for FAM157C Gene

No Data Available

Interacting Proteins for FAM157C Gene

Gene Ontology (GO) - Biological Process for FAM157C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM157C Gene

Transcripts for FAM157C Gene

mRNA/cDNA for FAM157C Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM157C Gene

No ASD Table

Relevant External Links for FAM157C Gene

GeneLoc Exon Structure for
FAM157C
ECgene alternative splicing isoforms for
FAM157C

Expression for FAM157C Gene

mRNA expression in normal human tissues for FAM157C Gene

mRNA differential expression in normal tissues according to GTEx for FAM157C Gene

This gene is overexpressed in Whole Blood (x22.8).

NURSA nuclear receptor signaling pathways regulating expression of FAM157C Gene:

FAM157C
genes like me logo Genes that share expression patterns with FAM157C: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAM157C Gene

Orthologs for FAM157C Gene

Evolution for FAM157C Gene

ENSEMBL:
Gene Tree for FAM157C (if available)
TreeFam:
Gene Tree for FAM157C (if available)

No data available for Orthologs for FAM157C Gene

Paralogs for FAM157C Gene

(3) SIMAP similar genes for FAM157C Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM157C: view

No data available for Paralogs for FAM157C Gene

Variants for FAM157C Gene

Sequence variations from dbSNP and Humsavar for FAM157C Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs10083740 -- 90,166,424(+) AGCTC(A/C)TGCAT intron-variant, nc-transcript-variant
rs10083787 -- 90,166,052(+) TAACA(C/T)GCCCA intron-variant
rs111218311 -- 90,122,013(+) GGTTA(A/G)GGGTT intron-variant
rs111218496 -- 90,121,902(+) TGGGT(A/T)GGGTT intron-variant
rs111257828 -- 90,167,946(+) TCCAG(G/T)CCCGA intron-variant, downstream-variant-500B

Relevant External Links for FAM157C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM157C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM157C Gene

Disorders for FAM157C Gene

Relevant External Links for FAM157C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM157C

No disorders were found for FAM157C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM157C Gene

Publications for FAM157C Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 3 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for FAM157C Gene

Sources for FAM157C Gene

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