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Aliases for FAM157C Gene

Subcategory (RNA class) for FAM157C Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FAM157C Gene

  • Family With Sequence Similarity 157, Member C 2 3

External Ids for FAM157C Gene

ORGUL Members for FAM157C Gene

Summaries for FAM157C Gene

GeneCards Summary for FAM157C Gene

FAM157C (Family With Sequence Similarity 157, Member C) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM157C Gene

Genomics for FAM157C Gene

Genomic Location for FAM157C Gene

Start:
90,102,271 bp from pter
End:
90,186,204 bp from pter
Size:
83,934 bases
Orientation:
Plus strand

Genomic View for FAM157C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM157C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM157C Gene

Regulatory Elements for FAM157C Gene

Proteins for FAM157C Gene

  • Protein details for FAM157C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CG43-F157C_HUMAN
    Recommended name:
    Putative protein FAM157C
    Protein Accession:
    P0CG43
    Secondary Accessions:

    Protein attributes for FAM157C Gene

    Size:
    387 amino acids
    Molecular mass:
    43408 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM157C Gene

Proteomics data for FAM157C Gene at MOPED

Post-translational modifications for FAM157C Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM157C Gene

Domains for FAM157C Gene

Protein Domains for FAM157C Gene

ProtoNet:

UniProtKB/Swiss-Prot:

F157C_HUMAN
Family:
  • Belongs to the FAM157 family.:
    • P0CG43
genes like me logo Genes that share domains with FAM157C: view

No data available for Gene Families for FAM157C Gene

Function for FAM157C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM157C Gene

Localization for FAM157C Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM157C Gene

Pathways for FAM157C Gene

SuperPathways for FAM157C Gene

No Data Available

Interacting Proteins for FAM157C Gene

Gene Ontology (GO) - Biological Process for FAM157C Gene

None

No data available for Pathways by source for FAM157C Gene

Transcripts for FAM157C Gene

mRNA/cDNA for FAM157C Gene

(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM157C Gene

No ASD Table

Relevant External Links for FAM157C Gene

GeneLoc Exon Structure for
FAM157C
ECgene alternative splicing isoforms for
FAM157C

Expression for FAM157C Gene

mRNA expression in normal human tissues for FAM157C Gene

mRNA differential expression in normal tissues according to GTEx for FAM157C Gene

This gene is overexpressed in Whole Blood (22.8).
genes like me logo Genes that share expressions with FAM157C: view

Orthologs for FAM157C Gene

Evolution for FAM157C Gene

ENSEMBL:
Gene Tree for FAM157C (if available)
TreeFam:
Gene Tree for FAM157C (if available)

No data available for Orthologs for FAM157C Gene

Paralogs for FAM157C Gene

Selected SIMAP similar genes for FAM157C Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM157C: view

No data available for Paralogs for FAM157C Gene

Variants for FAM157C Gene

Sequence variations from dbSNP and Humsavar for FAM157C Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs2361957 -- 90,122,641(+) AAACT(C/G)TTGTT intron-variant
rs2361958 -- 90,122,753(+) TTATT(A/T)TTCAC intron-variant
rs2361959 -- 90,122,759(+) TTCAC(A/T)AAATA intron-variant
rs2462346 -- 90,114,728(+) tgtag(A/C/G)ttgtg intron-variant
rs2562196 -- 90,106,953(-) GTGCG(C/T)GTCTC intron-variant

Relevant External Links for FAM157C Gene

HapMap Linkage Disequilibrium report
FAM157C

No data available for Structural Variations from Database of Genomic Variants (DGV) for FAM157C Gene

Disorders for FAM157C Gene

No disorders were found for FAM157C Gene.

No data available for UniProtKB/Swiss-Prot for FAM157C Gene

Publications for FAM157C Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FAM157C Gene

Sources for FAM157C Gene

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