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Aliases for FAM157A Gene

Aliases for FAM157A Gene

  • Family With Sequence Similarity 157, Member A 2 3

External Ids for FAM157A Gene

Previous GeneCards Identifiers for FAM157A Gene

  • GC03P199364
  • GC03P197879

Summaries for FAM157A Gene

GeneCards Summary for FAM157A Gene

FAM157A (Family With Sequence Similarity 157, Member A) is a Protein Coding gene. An important paralog of this gene is FAM157B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM157A Gene

Genomics for FAM157A Gene

Regulatory Elements for FAM157A Gene

Transcription factor binding sites by QIAGEN in the FAM157A gene promoter:

Genomic Location for FAM157A Gene

Start:
198,152,168 bp from pter
End:
198,212,310 bp from pter
Size:
60,143 bases
Orientation:
Plus strand

Genomic View for FAM157A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM157A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM157A Gene

Proteins for FAM157A Gene

  • Protein details for FAM157A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JC47-F157A_HUMAN
    Recommended name:
    Putative protein FAM157A
    Protein Accession:
    C9JC47
    Secondary Accessions:

    Protein attributes for FAM157A Gene

    Size:
    383 amino acids
    Molecular mass:
    42896 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM157A Gene

Proteomics data for FAM157A Gene at MOPED

Post-translational modifications for FAM157A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM157A Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FAM157A Gene

Domains for FAM157A Gene

Protein Domains for FAM157A Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM157A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

C9JC47

UniProtKB/Swiss-Prot:

F157A_HUMAN :
  • C9JC47
Family:
  • Belongs to the FAM157 family.
genes like me logo Genes that share domains with FAM157A: view

No data available for Gene Families for FAM157A Gene

Function for FAM157A Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM157A Gene

Localization for FAM157A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM157A Gene COMPARTMENTS Subcellular localization image for FAM157A gene
Compartment Confidence
nucleus 3
cytosol 2
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FAM157A Gene

Pathways for FAM157A Gene

SuperPathways for FAM157A Gene

No Data Available

Interacting Proteins for FAM157A Gene

Gene Ontology (GO) - Biological Process for FAM157A Gene

None

No data available for Pathways by source for FAM157A Gene

Transcripts for FAM157A Gene

mRNA/cDNA for FAM157A Gene

(3) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM157A Gene

Family with sequence similarity 157, member A:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM157A

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for FAM157A
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM157A Gene

No ASD Table

Relevant External Links for FAM157A Gene

GeneLoc Exon Structure for
FAM157A
ECgene alternative splicing isoforms for
FAM157A

Expression for FAM157A Gene

mRNA expression in normal human tissues for FAM157A Gene

mRNA differential expression in normal tissues according to GTEx for FAM157A Gene

This gene is overexpressed in Whole Blood (25.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM157A Gene

SOURCE GeneReport for Unigene cluster for FAM157A Gene Hs.744675

genes like me logo Genes that share expressions with FAM157A: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for FAM157A Gene

Orthologs for FAM157A Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM157A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC100615675 35
  • 96.4 (n)
  • 91.97 (a)
Species with no ortholog for FAM157A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM157A Gene

ENSEMBL:
Gene Tree for FAM157A (if available)
TreeFam:
Gene Tree for FAM157A (if available)

Paralogs for FAM157A Gene

Paralogs for FAM157A Gene

Selected SIMAP similar genes for FAM157A Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM157A: view

Variants for FAM157A Gene

Sequence variations from dbSNP and Humsavar for FAM157A Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs940483 -- 198,152,987(-) ACTGA(C/G)GATCC intron-variant
rs1052171 -- 198,171,670(+) gagcc(A/C)ttagc intron-variant
rs1132104 -- 198,171,734(+) gacac(C/G)cagct intron-variant
rs2021178 -- 198,153,348(-) TTTGC(A/G)AGGCC reference, missense
rs2257852 -- 198,163,944(-) AAAAG(A/G)AGCCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM157A Gene

Variant ID Type Subtype PubMed ID
esv33797 CNV Gain+Loss 17666407
dgv5381n71 CNV Gain 21882294
dgv1562e1 CNV Complex 17122850
dgv5383n71 CNV Gain 21882294
esv26652 CNV Gain+Loss 19812545
nsv820948 CNV Duplication 20802225
nsv10407 CNV Gain 18304495
nsv471429 CNV Duplication 19718026
nsv482085 CNV Gain 20164927
nsv10408 CNV Gain+Loss 18304495
esv6783 CNV Loss 19470904

Relevant External Links for FAM157A Gene

HapMap Linkage Disequilibrium report
FAM157A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM157A Gene

Disorders for FAM157A Gene

No disorders were found for FAM157A Gene.

No data available for UniProtKB/Swiss-Prot for FAM157A Gene

Publications for FAM157A Gene

  1. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4

Products for FAM157A Gene

Sources for FAM157A Gene

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