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Aliases for FAM157A Gene

Aliases for FAM157A Gene

  • Family With Sequence Similarity 157 Member A 2 3 5
  • Family With Sequence Similarity 157, Member A 2

External Ids for FAM157A Gene

Previous GeneCards Identifiers for FAM157A Gene

  • GC03P199364
  • GC03P197879

Summaries for FAM157A Gene

GeneCards Summary for FAM157A Gene

FAM157A (Family With Sequence Similarity 157 Member A) is a Protein Coding gene. An important paralog of this gene is FAM157B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM157A Gene

Genomics for FAM157A Gene

Regulatory Elements for FAM157A Gene

Enhancers for FAM157A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F197445 0.7 ENCODE 10.5 -707.6 -707550 0.2 HDGF ATF1 ARNT ELK1 GATA2 NCOA1 REST CREB3 MBD2 MEF2D ENSG00000235126 UBXN7 ENSG00000249626 FAM157A SENP5 ENSG00000229912 GC03M197355
GH03F198149 0.5 Ensembl 0.8 +0.7 728 7.4 ELF3 MLX ARID4B THRB ZSCAN9 RARA GATA4 ETV6 CREM MIXL1 FAM157A GC03M198153
GH03F198145 0.2 Ensembl 0.4 -5.6 -5574 2.4 RFX1 FAM157A ENSG00000236246
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAM157A on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the FAM157A gene promoter:

Genomic Location for FAM157A Gene

Chromosome:
3
Start:
198,151,974 bp from pter
End:
198,222,513 bp from pter
Size:
70,540 bases
Orientation:
Plus strand

Genomic View for FAM157A Gene

Genes around FAM157A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM157A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM157A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM157A Gene

Proteins for FAM157A Gene

  • Protein details for FAM157A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JC47-F157A_HUMAN
    Recommended name:
    Putative protein FAM157A
    Protein Accession:
    C9JC47

    Protein attributes for FAM157A Gene

    Size:
    383 amino acids
    Molecular mass:
    42896 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM157A Gene

Post-translational modifications for FAM157A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM157A Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FAM157A Gene

Domains & Families for FAM157A Gene

Protein Domains for FAM157A Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM157A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

C9JC47

UniProtKB/Swiss-Prot:

F157A_HUMAN :
  • Belongs to the FAM157 family.
Family:
  • Belongs to the FAM157 family.
genes like me logo Genes that share domains with FAM157A: view

No data available for Gene Families for FAM157A Gene

Function for FAM157A Gene

Phenotypes for FAM157A Gene

GenomeRNAi human phenotypes for FAM157A:
genes like me logo Genes that share phenotypes with FAM157A: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM157A Gene

Localization for FAM157A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM157A Gene COMPARTMENTS Subcellular localization image for FAM157A gene
Compartment Confidence
nucleus 3
cytosol 2
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FAM157A Gene

Pathways & Interactions for FAM157A Gene

SuperPathways for FAM157A Gene

No Data Available

Interacting Proteins for FAM157A Gene

Gene Ontology (GO) - Biological Process for FAM157A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM157A Gene

Transcripts for FAM157A Gene

mRNA/cDNA for FAM157A Gene

(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM157A Gene

Family with sequence similarity 157, member A:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM157A Gene

No ASD Table

Relevant External Links for FAM157A Gene

GeneLoc Exon Structure for
FAM157A
ECgene alternative splicing isoforms for
FAM157A

Expression for FAM157A Gene

mRNA expression in normal human tissues for FAM157A Gene

mRNA differential expression in normal tissues according to GTEx for FAM157A Gene

This gene is overexpressed in Whole Blood (x25.1).

Protein differential expression in normal tissues from HIPED for FAM157A Gene

This gene is overexpressed in Urine (57.2) and Adipocyte (11.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM157A Gene



Protein tissue co-expression partners for FAM157A Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM157A Gene:

FAM157A

SOURCE GeneReport for Unigene cluster for FAM157A Gene:

Hs.744675
genes like me logo Genes that share expression patterns with FAM157A: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for FAM157A Gene

Orthologs for FAM157A Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM157A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC100615675 34
  • 96.4 (n)
Species where no ortholog for FAM157A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM157A Gene

ENSEMBL:
Gene Tree for FAM157A (if available)
TreeFam:
Gene Tree for FAM157A (if available)

Paralogs for FAM157A Gene

Paralogs for FAM157A Gene

(2) SIMAP similar genes for FAM157A Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM157A: view

Variants for FAM157A Gene

Sequence variations from dbSNP and Humsavar for FAM157A Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1052171 -- 198,171,670(+) gagcc(A/C)ttagc intron-variant
rs111067021 -- 198,173,513(+) TTAGG(G/T)TTCAG intron-variant
rs111212045 -- 198,173,293(+) TAAGG(A/G/T)TTAGG intron-variant
rs111212046 -- 198,173,294(+) AAGGA(A/T)TAGGG intron-variant
rs111212047 -- 198,173,295(+) AGGAT(A/T)AGGGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM157A Gene

Variant ID Type Subtype PubMed ID
dgv2907e59 CNV duplication 20981092
dgv5046n100 CNV gain 25217958
dgv5048n100 CNV gain 25217958
dgv5049n100 CNV loss 25217958
esv26652 CNV gain+loss 19812545
esv2759215 CNV gain 17122850
esv2760756 CNV gain+loss 21179565
esv2763718 CNV gain+loss 21179565
esv3379603 CNV duplication 20981092
esv33797 CNV gain+loss 17666407
esv3406484 CNV duplication 20981092
esv3432549 CNV duplication 20981092
esv3449725 CNV duplication 20981092
esv6783 CNV loss 19470904
nsv1011094 CNV gain 25217958
nsv10407 CNV gain 18304495
nsv10408 CNV gain+loss 18304495
nsv1115657 CNV duplication 24896259
nsv1115658 CNV duplication 24896259
nsv1132581 CNV duplication 24896259
nsv1146285 CNV duplication 26484159
nsv471429 CNV gain 19718026
nsv482085 CNV gain 20164927
nsv593177 CNV loss 21841781
nsv593178 CNV loss 21841781
nsv820948 CNV duplication 20802225
nsv950317 CNV deletion 24416366
nsv965252 CNV duplication 23825009
nsv979918 CNV duplication 23825009

Relevant External Links for FAM157A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM157A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM157A Gene

Disorders for FAM157A Gene

Relevant External Links for FAM157A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM157A

No disorders were found for FAM157A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM157A Gene

Publications for FAM157A Gene

  1. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4 64

Products for FAM157A Gene

Sources for FAM157A Gene

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