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Aliases for FAM156B Gene

Aliases for FAM156B Gene

  • Family With Sequence Similarity 156, Member B 2 3
  • Transmembrane Protein 29/29B 3 4
  • Transmembrane Protein 29B 2 3
  • TMEM29B 3 4
  • Transmembrane Protein 29 3
  • Protein FAM156A/FAM156B 3
  • Protein FAM156A 3
  • FAM156A FAM156B 4
  • TMEM29 4

External Ids for FAM156B Gene

Previous HGNC Symbols for FAM156B Gene

  • TMEM29B

Previous GeneCards Identifiers for FAM156B Gene

  • GC0XP052940

Summaries for FAM156B Gene

GeneCards Summary for FAM156B Gene

FAM156B (Family With Sequence Similarity 156, Member B) is a Protein Coding gene. An important paralog of this gene is FAM156A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM156B Gene

Genomics for FAM156B Gene

Regulatory Elements for FAM156B Gene

Genomic Location for FAM156B Gene

Start:
52,891,306 bp from pter
End:
52,908,560 bp from pter
Size:
17,255 bases
Orientation:
Plus strand

Genomic View for FAM156B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM156B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM156B Gene

Proteins for FAM156B Gene

  • Protein details for FAM156B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NDB6-FA156_HUMAN
    Recommended name:
    Protein FAM156A/FAM156B
    Protein Accession:
    Q8NDB6
    Secondary Accessions:
    • B3KQ92
    • Q5JPL2
    • Q5JPL3
    • Q5JPL4
    • Q5JPL5
    • Q5JPL6
    • Q68D17
    • Q6NVY3
    • Q9UI49

    Protein attributes for FAM156B Gene

    Size:
    213 amino acids
    Molecular mass:
    24412 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAF24055.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=AAH00867.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

neXtProt entry for FAM156B Gene

Proteomics data for FAM156B Gene at MOPED

Post-translational modifications for FAM156B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FAM156B Gene

Domains for FAM156B Gene

Protein Domains for FAM156B Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM156B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM156B: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FAM156B Gene

Function for FAM156B Gene

Gene Ontology (GO) - Molecular Function for FAM156B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
GO:0035064 methylated histone binding IEA --
genes like me logo Genes that share ontologies with FAM156B: view
genes like me logo Genes that share phenotypes with FAM156B: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM156B Gene

Localization for FAM156B Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM156B Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for FAM156B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005635 nuclear envelope IDA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM156B: view

No data available for Subcellular locations from COMPARTMENTS for FAM156B Gene

Pathways for FAM156B Gene

SuperPathways for FAM156B Gene

No Data Available

Interacting Proteins for FAM156B Gene

Gene Ontology (GO) - Biological Process for FAM156B Gene

None

No data available for Pathways by source for FAM156B Gene

Transcripts for FAM156B Gene

mRNA/cDNA for FAM156B Gene

(12) REFSEQ mRNAs :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM156B

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for FAM156B
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM156B Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c · 7d
SP1: - - - - -
SP2: - -
SP3:
SP4:
SP5: - - - -
SP6:

Relevant External Links for FAM156B Gene

GeneLoc Exon Structure for
FAM156B
ECgene alternative splicing isoforms for
FAM156B

Expression for FAM156B Gene

mRNA expression in normal human tissues for FAM156B Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM156B Gene

genes like me logo Genes that share expressions with FAM156B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM156B Gene

Orthologs for FAM156B Gene

This gene was present in the common ancestor of mammals.

Orthologs for FAM156B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 100 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 67 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Tmem29 16
Tmem29 36
  • 56 (a)
OneToMany
Species with no ortholog for FAM156B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM156B Gene

ENSEMBL:
Gene Tree for FAM156B (if available)
TreeFam:
Gene Tree for FAM156B (if available)

Paralogs for FAM156B Gene

Paralogs for FAM156B Gene

Selected SIMAP similar genes for FAM156B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM156B: view

Variants for FAM156B Gene

Sequence variations from dbSNP and Humsavar for FAM156B Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs4893656 -- 52,895,914(+) TGTCT(G/T)CCCAC upstream-variant-2KB, intron-variant
rs4893657 -- 52,896,856(+) GAAAC(A/G)GCACG upstream-variant-2KB, intron-variant
rs6643572 -- 52,889,512(+) TCCCA(C/G)ACTCG upstream-variant-2KB
rs6643575 -- 52,903,241(+) ATCGC(A/C)AAATA intron-variant
rs79666072 -- 52,904,233(+) CGTAT(A/T)GTATC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM156B Gene

Variant ID Type Subtype PubMed ID
nsv435891 CNV Deletion 17901297
esv2740175 CNV Deletion 23290073
nsv499358 OTHER Inversion 21111241
nsv7447 OTHER Inversion 18451855

Relevant External Links for FAM156B Gene

HapMap Linkage Disequilibrium report
FAM156B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM156B Gene

Disorders for FAM156B Gene

No disorders were found for FAM156B Gene.

No data available for UniProtKB/Swiss-Prot for FAM156B Gene

Publications for FAM156B Gene

  1. Identification of a new cancer/testis gene family, CT47, among expressed multicopy genes on the human X chromosome. (PMID: 16382448) Chen Y.-T. … Jongeneel C.V. (Genes Chromosomes Cancer 2006) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4
  5. Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. (PMID: 11256614) Simpson J.C. … Wiemann S. (EMBO Rep. 2000) 3

Products for FAM156B Gene

Sources for FAM156B Gene

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