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Aliases for FAM155B Gene

Aliases for FAM155B Gene

  • Family With Sequence Similarity 155, Member B 2 3
  • Transmembrane Protein 28 2 3 4
  • TMEM28 3 4
  • TED 3 4
  • Chromosome X Open Reading Frame 63 2
  • Transmembrane Protein FAM155B 3
  • BB57D9.1 (TED Protein) 3
  • Protein TED 4
  • BB57D9.1 3
  • CXorf63 3

External Ids for FAM155B Gene

Previous Symbols for FAM155B Gene

  • TMEM28
  • CXorf63

Summaries for FAM155B Gene

Entrez Gene Summary for FAM155B Gene

  • This gene encodes a product belonging to a family of proteins with unknown function. The presence of two transmembrane domains suggests that this protein is a multi-pass membrane protein. [provided by RefSeq, Sep 2011]

GeneCards Summary for FAM155B Gene

FAM155B (Family With Sequence Similarity 155, Member B) is a Protein Coding gene. Diseases associated with FAM155B include enterobiasis. An important paralog of this gene is FAM155A.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM155B Gene

Genomics for FAM155B Gene

Genomic Location for FAM155B Gene

Start:
69,505,235 bp from pter
End:
69,532,508 bp from pter
Size:
27,274 bases
Orientation:
Plus strand

Genomic View for FAM155B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM155B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM155B Gene

Regulatory Elements for FAM155B Gene

Proteins for FAM155B Gene

  • Protein details for FAM155B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O75949-F155B_HUMAN
    Recommended name:
    Transmembrane protein FAM155B
    Protein Accession:
    O75949
    Secondary Accessions:
    • B1ALV6
    • B9EGK1
    • D3DVU1

    Protein attributes for FAM155B Gene

    Size:
    473 amino acids
    Molecular mass:
    52605 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for FAM155B Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FAM155B Gene

Proteomics data for FAM155B Gene at MOPED

Post-translational modifications for FAM155B Gene

  • Glycosylation at Asn120 and Asn193

Other Protein References for FAM155B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM155B Gene

Domains for FAM155B Gene

Protein Domains for FAM155B Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM155B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

O75949

UniProtKB/Swiss-Prot:

F155B_HUMAN
Family:
  • Belongs to the FAM155 family.:
    • O75949
genes like me logo Genes that share domains with FAM155B: view

No data available for Gene Families for FAM155B Gene

Function for FAM155B Gene

miRNA for FAM155B Gene

miRTarBase miRNAs that target FAM155B

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for FAM155B Gene

Localization for FAM155B Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM155B Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM155B Gene COMPARTMENTS Subcellular localization image for FAM155B gene
Compartment Confidence
extracellular 2
cytosol 1
endoplasmic reticulum 1
golgi apparatus 1
lysosome 1
nucleus 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for FAM155B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM155B: view

Pathways for FAM155B Gene

SuperPathways for FAM155B Gene

No Data Available

Interacting Proteins for FAM155B Gene

Gene Ontology (GO) - Biological Process for FAM155B Gene

None

No data available for Pathways by source for FAM155B Gene

Transcripts for FAM155B Gene

mRNA/cDNA for FAM155B Gene

(3) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(22) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM155B Gene

Family with sequence similarity 155, member B:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM155B Gene

No ASD Table

Relevant External Links for FAM155B Gene

GeneLoc Exon Structure for
FAM155B
ECgene alternative splicing isoforms for
FAM155B

Expression for FAM155B Gene

mRNA expression in normal human tissues for FAM155B Gene

mRNA differential expression in normal tissues according to GTEx for FAM155B Gene

This gene is overexpressed in Heart - Atrial Appendage (17.8) and Heart - Left Ventricle (12.7).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM155B Gene

SOURCE GeneReport for Unigene cluster for FAM155B Gene Hs.87619

genes like me logo Genes that share expressions with FAM155B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for FAM155B Gene

Orthologs for FAM155B Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM155B Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia FAM155B 35
  • 93.56 (n)
  • 91.72 (a)
FAM155B 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM155B 35
  • 93.93 (n)
  • 93.86 (a)
FAM155B 36
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tmem28 35
  • 93.56 (n)
  • 94.06 (a)
Tmem28 16
Tmem28 36
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM155B 36
  • 53 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam155b 35
  • 93.63 (n)
  • 94.27 (a)
chicken
(Gallus gallus)
Aves FAM155B 35
  • 67.9 (n)
  • 58.46 (a)
FAM155B 36
  • 48 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fam155b 35
  • 64.25 (n)
  • 58.55 (a)
zebrafish
(Danio rerio)
Actinopterygii fam155b 35
  • 54.89 (n)
  • 44.86 (a)
fam155b 36
  • 41 (a)
OneToOne
Species with no ortholog for FAM155B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM155B Gene

ENSEMBL:
Gene Tree for FAM155B (if available)
TreeFam:
Gene Tree for FAM155B (if available)

Paralogs for FAM155B Gene

Paralogs for FAM155B Gene

genes like me logo Genes that share paralogs with FAM155B: view

Variants for FAM155B Gene

Sequence variations from dbSNP and Humsavar for FAM155B Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs501342 -- 69,509,663(+) TGAGA(A/G)GGAGG intron-variant
rs581299 -- 69,508,705(+) CTCAG(C/T)CCCTC intron-variant
rs730138 -- 69,518,368(+) TCAAA(A/G)TACTG intron-variant
rs1171941 -- 69,505,137(+) CATCG(C/G)GCCGG upstream-variant-2KB
rs1171942 - 69,505,797(+) CTCCC(C/T)TTCCC missense, reference

Structural Variations from Database of Genomic Variants (DGV) for FAM155B Gene

Variant ID Type Subtype PubMed ID
esv1584074 OTHER Inversion 17803354
esv25466 CNV Loss 19812545
esv23322 CNV Gain 19812545

Relevant External Links for FAM155B Gene

HapMap Linkage Disequilibrium report
FAM155B
Locus Specific Mutation Databases (LSDB)
FAM155B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM155B Gene

Disorders for FAM155B Gene

(1) MalaCards Diseases for FAM155B Gene

Search for FAM155B Gene in MalaCards »

(2) University of Copenhagen DISEASES for FAM155B Gene

Relevant External Links for FAM155B

Genetic Association Database (GAD)
FAM155B
genes like me logo Genes that share disorders with FAM155B: view

No data available for UniProtKB/Swiss-Prot for FAM155B Gene

Publications for FAM155B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 48
  3. Genome-wide association study reveals multiple loci associated with primary tooth development during infancy. (PMID: 20195514) Pillas D. … Jarvelin M.R. (PLoS Genet. 2010) 48
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 4

Products for FAM155B Gene

Sources for FAM155B Gene

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