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Aliases for FAM155A Gene

Aliases for FAM155A Gene

  • Family With Sequence Similarity 155, Member A 2 3

External Ids for FAM155A Gene

Summaries for FAM155A Gene

GeneCards Summary for FAM155A Gene

FAM155A (Family With Sequence Similarity 155, Member A) is a Protein Coding gene. An important paralog of this gene is FAM155B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM155A Gene

Genomics for FAM155A Gene

Genomic Location for FAM155A Gene

Start:
107,163,510 bp from pter
End:
107,867,112 bp from pter
Size:
703,603 bases
Orientation:
Minus strand

Genomic View for FAM155A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM155A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM155A Gene

Regulatory Elements for FAM155A Gene

Proteins for FAM155A Gene

  • Protein details for FAM155A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B1AL88-F155A_HUMAN
    Recommended name:
    Transmembrane protein FAM155A
    Protein Accession:
    B1AL88
    Secondary Accessions:
    • B2RUV1
    • B7Z334

    Protein attributes for FAM155A Gene

    Size:
    458 amino acids
    Molecular mass:
    51493 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM155A Gene

Proteomics data for FAM155A Gene at MOPED

Post-translational modifications for FAM155A Gene

Other Protein References for FAM155A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM155A Gene

Domains for FAM155A Gene

Protein Domains for FAM155A Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

F155A_HUMAN
Family:
  • Belongs to the FAM155 family.:
    • B1AL88
genes like me logo Genes that share domains with FAM155A: view

No data available for Gene Families for FAM155A Gene

Function for FAM155A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM155A Gene

Localization for FAM155A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM155A Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM155A Gene COMPARTMENTS Subcellular localization image for FAM155A gene
Compartment Confidence
cytosol 1
endoplasmic reticulum 1
golgi apparatus 1
mitochondrion 1
nucleus 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for FAM155A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM155A: view

Pathways for FAM155A Gene

SuperPathways for FAM155A Gene

No Data Available

Interacting Proteins for FAM155A Gene

Gene Ontology (GO) - Biological Process for FAM155A Gene

None

No data available for Pathways by source for FAM155A Gene

Transcripts for FAM155A Gene

mRNA/cDNA for FAM155A Gene

(2) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM155A Gene

Family with sequence similarity 155, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM155A Gene

No ASD Table

Relevant External Links for FAM155A Gene

GeneLoc Exon Structure for
FAM155A
ECgene alternative splicing isoforms for
FAM155A

Expression for FAM155A Gene

mRNA expression in normal human tissues for FAM155A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FAM155A Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (6.2), Brain - Anterior cingulate cortex (BA24) (5.7), Brain - Cortex (4.7), Brain - Hypothalamus (4.6), Brain - Hippocampus (4.2), Brain - Amygdala (4.2), and Pituitary (4.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM155A Gene

SOURCE GeneReport for Unigene cluster for FAM155A Gene Hs.535394

genes like me logo Genes that share expressions with FAM155A: view

Orthologs for FAM155A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM155A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM155A 36
  • 99.64 (n)
  • 99.34 (a)
FAM155A 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM155A 36
  • 88.11 (n)
  • 86.12 (a)
FAM155A 37
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM155A 36
  • 91.99 (n)
  • 89.9 (a)
FAM155A 37
  • 73 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam155a 36
  • 88.16 (n)
  • 88.16 (a)
Fam155a 16
Fam155a 37
  • 87 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM155A 37
  • 82 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam155a 36
  • 88.3 (n)
  • 88.38 (a)
chicken
(Gallus gallus)
Aves -- 37
  • 81 (a)
OneToMany
-- 37
  • 81 (a)
OneToMany
FAM155A 36
  • 80.35 (n)
  • 74.22 (a)
lizard
(Anolis carolinensis)
Reptilia FAM155A 37
  • 76 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fam155a 36
  • 73.08 (n)
  • 69.62 (a)
zebrafish
(Danio rerio)
Actinopterygii fam155a 36
  • 67.51 (n)
  • 61.86 (a)
fam155a 37
  • 56 (a)
OneToMany
FAM155A (2 of 2) 37
  • 56 (a)
OneToMany
Species with no ortholog for FAM155A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM155A Gene

ENSEMBL:
Gene Tree for FAM155A (if available)
TreeFam:
Gene Tree for FAM155A (if available)

Paralogs for FAM155A Gene

Paralogs for FAM155A Gene

genes like me logo Genes that share paralogs with FAM155A: view

Variants for FAM155A Gene

Sequence variations from dbSNP and Humsavar for FAM155A Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs4253 -- 107,523,155(+) GGAAA(C/T)GGTAC intron-variant
rs10555 -- 107,168,886(-) GAGAT(C/G)AAGGA utr-variant-3-prime
rs140851 -- 107,498,048(+) TAACA(C/T)GTGAT intron-variant
rs474128 -- 107,491,328(+) GGTGA(C/T)TGACT intron-variant
rs485883 -- 107,560,967(+) AAAAA(A/G)CAATT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM155A Gene

Variant ID Type Subtype PubMed ID
esv34077 CNV Loss 18971310
nsv524956 CNV Gain 19592680
esv2747964 CNV Deletion 23290073
esv2747965 CNV Deletion 23290073
esv2747966 CNV Deletion 23290073
nsv826781 CNV Gain 20364138
nsv528262 CNV Gain 19592680
esv34169 CNV Loss 18971310
nsv900994 CNV Loss 21882294
nsv510623 CNV Loss 20534489
esv2281615 CNV Deletion 18987734
esv2747967 CNV Deletion 23290073
esv2583398 CNV Deletion 19546169
esv2242891 CNV Deletion 18987734
esv2747968 CNV Deletion 23290073
esv6504 CNV Loss 19470904
esv988148 CNV Deletion 20482838
esv1148527 CNV Deletion 17803354
esv2751127 CNV Loss 17911159
nsv900995 CNV Loss 21882294
nsv64265 CNV Loss 16902084
nsv900996 CNV Loss 21882294
nsv900997 CNV Loss 21882294
esv2481264 CNV Deletion 19546169
esv1931581 CNV Deletion 18987734
esv2658157 CNV Deletion 23128226
nsv900998 CNV Loss 21882294
nsv527392 CNV Gain 19592680
nsv832713 CNV Gain 17160897
esv271863 CNV Insertion 20981092
esv2671096 CNV Deletion 23128226
nsv519927 CNV Gain 19592680
nsv510364 CNV Loss 20534489
dgv592e1 CNV Complex 17122850
essv6053 CNV CNV 17122850
esv2665818 CNV Deletion 23128226
esv2747969 CNV Deletion 23290073
esv2069021 CNV Deletion 18987734
esv2747970 CNV Deletion 23290073
esv2139400 CNV Deletion 18987734
esv2747971 CNV Deletion 23290073
nsv900999 CNV Loss 21882294
nsv516705 CNV Loss 19592680
esv2667287 CNV Deletion 23128226
esv998714 CNV Deletion 20482838
nsv456110 CNV Gain 19166990
esv274221 CNV Insertion 20981092
nsv901000 CNV Loss 21882294
nsv832715 CNV Loss 17160897

Relevant External Links for FAM155A Gene

HapMap Linkage Disequilibrium report
FAM155A

Disorders for FAM155A Gene

Relevant External Links for FAM155A

Genetic Association Database (GAD)
FAM155A
Human Genome Epidemiology (HuGE) Navigator
FAM155A
genes like me logo Genes that share disorders with FAM155A: view

No data available for UniProtKB/Swiss-Prot for FAM155A Gene

Publications for FAM155A Gene

  1. A genome-wide association study on common SNPs and rare CNVs in anorexia nervosa. (PMID: 21079607) Wang K. … Hakonarson H. (Mol. Psychiatry 2011) 3 49
  2. Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study. (PMID: 18951430) Anney R.J. … Gill M. (Am. J. Med. Genet. B Neuropsychiatr. Genet. 2008) 3 49
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 49
  4. Genome-wide association scan of trait depression. (PMID: 20800221) Terracciano A. … Costa P.T. (Biol. Psychiatry 2010) 3
  5. Novel triplet repeat containing genes in human brain: cloning, expression, and length polymorphisms. (PMID: 8325628) Li S.H. … Ross C.A. (Genomics 1993) 3

Products for FAM155A Gene

Sources for FAM155A Gene

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