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Aliases for FAM155A Gene

Aliases for FAM155A Gene

  • Family With Sequence Similarity 155 Member A 2 3 5
  • Family With Sequence Similarity 155, Member A 2

External Ids for FAM155A Gene

Previous GeneCards Identifiers for FAM155A Gene

  • GC13M106619
  • GC13M107820
  • GC13M088412

Summaries for FAM155A Gene

GeneCards Summary for FAM155A Gene

FAM155A (Family With Sequence Similarity 155 Member A) is a Protein Coding gene. An important paralog of this gene is FAM155B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM155A Gene

Genomics for FAM155A Gene

Regulatory Elements for FAM155A Gene

Enhancers for FAM155A Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FAM155A on UCSC Golden Path with GeneCards custom track

Promoters for FAM155A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM155A on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM155A Gene

Chromosome:
13
Start:
107,163,510 bp from pter
End:
107,867,255 bp from pter
Size:
703,746 bases
Orientation:
Minus strand

Genomic View for FAM155A Gene

Genes around FAM155A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM155A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM155A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM155A Gene

Proteins for FAM155A Gene

  • Protein details for FAM155A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B1AL88-F155A_HUMAN
    Recommended name:
    Transmembrane protein FAM155A
    Protein Accession:
    B1AL88
    Secondary Accessions:
    • B2RUV1
    • B7Z334

    Protein attributes for FAM155A Gene

    Size:
    458 amino acids
    Molecular mass:
    51493 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM155A Gene

Proteomics data for FAM155A Gene at MOPED

Post-translational modifications for FAM155A Gene

  • Glycosylation at Asn 217
  • Modification sites at PhosphoSitePlus

Other Protein References for FAM155A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM155A Gene

Domains & Families for FAM155A Gene

Protein Domains for FAM155A Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM155A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

B1AL88

UniProtKB/Swiss-Prot:

F155A_HUMAN :
  • Belongs to the FAM155 family.
Family:
  • Belongs to the FAM155 family.
genes like me logo Genes that share domains with FAM155A: view

No data available for Gene Families for FAM155A Gene

Function for FAM155A Gene

Phenotypes for FAM155A Gene

GenomeRNAi human phenotypes for FAM155A:
genes like me logo Genes that share phenotypes with FAM155A: view

Animal Model Products

CRISPR Products

miRNA for FAM155A Gene

miRTarBase miRNAs that target FAM155A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FAM155A Gene

Localization for FAM155A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM155A Gene

Membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM155A Gene COMPARTMENTS Subcellular localization image for FAM155A gene
Compartment Confidence
cytosol 1
endoplasmic reticulum 1
golgi apparatus 1
mitochondrion 1
nucleus 1
peroxisome 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for FAM155A Gene

Pathways & Interactions for FAM155A Gene

SuperPathways for FAM155A Gene

No Data Available

Interacting Proteins for FAM155A Gene

Gene Ontology (GO) - Biological Process for FAM155A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM155A Gene

Drugs & Compounds for FAM155A Gene

No Compound Related Data Available

Transcripts for FAM155A Gene

mRNA/cDNA for FAM155A Gene

(2) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM155A Gene

Family with sequence similarity 155, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM155A Gene

No ASD Table

Relevant External Links for FAM155A Gene

GeneLoc Exon Structure for
FAM155A
ECgene alternative splicing isoforms for
FAM155A

Expression for FAM155A Gene

mRNA expression in normal human tissues for FAM155A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FAM155A Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x6.2), Brain - Anterior cingulate cortex (BA24) (x5.7), Brain - Cortex (x4.7), Brain - Hypothalamus (x4.6), Brain - Hippocampus (x4.2), Brain - Amygdala (x4.2), and Pituitary (x4.1).

Protein differential expression in normal tissues from HIPED for FAM155A Gene

This gene is overexpressed in Placenta (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM155A Gene



SOURCE GeneReport for Unigene cluster for FAM155A Gene Hs.535394

genes like me logo Genes that share expression patterns with FAM155A: view

Protein tissue co-expression partners for FAM155A Gene

- Elite partner

Primer Products

No data available for mRNA Expression by UniProt/SwissProt for FAM155A Gene

Orthologs for FAM155A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM155A Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia FAM155A 35
  • 88.11 (n)
  • 86.12 (a)
FAM155A 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM155A 35
  • 91.99 (n)
  • 89.9 (a)
FAM155A 36
  • 73 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam155a 35
  • 88.16 (n)
  • 88.16 (a)
Fam155a 16
Fam155a 36
  • 87 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia FAM155A 35
  • 99.64 (n)
  • 99.34 (a)
FAM155A 36
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam155a 35
  • 88.3 (n)
  • 88.38 (a)
platypus
(Ornithorhynchus anatinus)
Mammalia FAM155A 36
  • 82 (a)
OneToOne
chicken
(Gallus gallus)
Aves FAM155A 35
  • 80.35 (n)
  • 74.22 (a)
-- 36
  • 81 (a)
OneToMany
-- 36
  • 81 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia FAM155A 36
  • 76 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fam155a 35
  • 73.08 (n)
  • 69.62 (a)
zebrafish
(Danio rerio)
Actinopterygii fam155a 35
  • 67.51 (n)
  • 61.86 (a)
fam155a 36
  • 56 (a)
OneToMany
FAM155A (2 of 2) 36
  • 56 (a)
OneToMany
Species with no ortholog for FAM155A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM155A Gene

ENSEMBL:
Gene Tree for FAM155A (if available)
TreeFam:
Gene Tree for FAM155A (if available)

Paralogs for FAM155A Gene

Paralogs for FAM155A Gene

genes like me logo Genes that share paralogs with FAM155A: view

Variants for FAM155A Gene

Sequence variations from dbSNP and Humsavar for FAM155A Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs4253 -- 107,523,155(+) GGAAA(C/T)GGTAC intron-variant
rs10555 -- 107,168,886(-) GAGAT(C/G)AAGGA utr-variant-3-prime
rs474128 -- 107,491,328(+) GGTGA(C/T)TGACT intron-variant
rs485883 -- 107,560,967(+) AAAAA(A/G)CAATT intron-variant
rs486514 -- 107,503,570(+) ggcta(A/C)cacat intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM155A Gene

Variant ID Type Subtype PubMed ID
esv34077 CNV Loss 18971310
nsv524956 CNV Gain 19592680
esv2747964 CNV Deletion 23290073
esv2747965 CNV Deletion 23290073
esv2747966 CNV Deletion 23290073
nsv826781 CNV Gain 20364138
nsv528262 CNV Gain 19592680
esv34169 CNV Loss 18971310
nsv900994 CNV Loss 21882294
nsv510623 CNV Loss 20534489
esv2281615 CNV Deletion 18987734
esv2747967 CNV Deletion 23290073
esv2583398 CNV Deletion 19546169
esv2242891 CNV Deletion 18987734
esv2747968 CNV Deletion 23290073
esv6504 CNV Loss 19470904
esv988148 CNV Deletion 20482838
esv1148527 CNV Deletion 17803354
esv2751127 CNV Loss 17911159
nsv900995 CNV Loss 21882294
nsv64265 CNV Loss 16902084
nsv900996 CNV Loss 21882294
nsv900997 CNV Loss 21882294
esv2481264 CNV Deletion 19546169
esv1931581 CNV Deletion 18987734
esv2658157 CNV Deletion 23128226
nsv900998 CNV Loss 21882294
nsv527392 CNV Gain 19592680
nsv832713 CNV Gain 17160897
esv271863 CNV Insertion 20981092
esv2671096 CNV Deletion 23128226
nsv519927 CNV Gain 19592680
nsv510364 CNV Loss 20534489
dgv592e1 CNV Complex 17122850
essv6053 CNV CNV 17122850
esv2665818 CNV Deletion 23128226
esv2747969 CNV Deletion 23290073
esv2069021 CNV Deletion 18987734
esv2747970 CNV Deletion 23290073
esv2139400 CNV Deletion 18987734
esv2747971 CNV Deletion 23290073
nsv900999 CNV Loss 21882294
nsv516705 CNV Loss 19592680
esv2667287 CNV Deletion 23128226
esv998714 CNV Deletion 20482838
nsv456110 CNV Gain 19166990
esv274221 CNV Insertion 20981092
nsv901000 CNV Loss 21882294
nsv832715 CNV Loss 17160897

Variation tolerance for FAM155A Gene

Residual Variation Intolerance Score: 32.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.47; 71.62% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for FAM155A Gene

Disorders for FAM155A Gene

Relevant External Links for FAM155A

Genetic Association Database (GAD)
FAM155A
Human Genome Epidemiology (HuGE) Navigator
FAM155A
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM155A

No disorders were found for FAM155A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM155A Gene

Publications for FAM155A Gene

  1. A genome-wide association study on common SNPs and rare CNVs in anorexia nervosa. (PMID: 21079607) Wang K. … Hakonarson H. (Mol. Psychiatry 2011) 3 48 67
  2. Genome-wide association study of vitamin D levels in children: replication in the Western Australian Pregnancy Cohort (Raine) study. (PMID: 25208829) Anderson D. … Blackwell J.M. (Genes Immun. 2014) 3
  3. Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis. (PMID: 23453885) (Lancet 2013) 3
  4. A genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis. (PMID: 23509962) Greliche N. … TrAcgouAt D.A. (BMC Med. Genet. 2013) 3
  5. A genome-wide association study for reading and language abilities in two population cohorts. (PMID: 23738518) Luciano M. … Bates T.C. (Genes Brain Behav. 2013) 3

Products for FAM155A Gene

Sources for FAM155A Gene

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