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Aliases for FAM149B1 Gene

Aliases for FAM149B1 Gene

  • Family With Sequence Similarity 149, Member B1 2 3
  • KIAA0974 2 3 4
  • Protein FAM149B1 3

External Ids for FAM149B1 Gene

Previous Symbols for FAM149B1 Gene

  • KIAA0974

Summaries for FAM149B1 Gene

GeneCards Summary for FAM149B1 Gene

FAM149B1 (Family With Sequence Similarity 149, Member B1) is a Protein Coding gene. An important paralog of this gene is FAM149A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM149B1 Gene

Genomics for FAM149B1 Gene

Genomic Location for FAM149B1 Gene

Start:
73,168,119 bp from pter
End:
73,244,504 bp from pter
Size:
76,386 bases
Orientation:
Plus strand

Genomic View for FAM149B1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM149B1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM149B1 Gene

Regulatory Elements for FAM149B1 Gene

Proteins for FAM149B1 Gene

  • Protein details for FAM149B1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96BN6-F149B_HUMAN
    Recommended name:
    Protein FAM149B1
    Protein Accession:
    Q96BN6
    Secondary Accessions:
    • Q9Y2I0

    Protein attributes for FAM149B1 Gene

    Size:
    582 amino acids
    Molecular mass:
    64618 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH15394.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for FAM149B1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FAM149B1 Gene

Proteomics data for FAM149B1 Gene at MOPED

Post-translational modifications for FAM149B1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM149B1 Gene

No data available for DME Specific Peptides for FAM149B1 Gene

Domains for FAM149B1 Gene

Protein Domains for FAM149B1 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

F149B_HUMAN
Family:
  • Belongs to the FAM149 family.:
    • Q96BN6
genes like me logo Genes that share domains with FAM149B1: view

No data available for Gene Families for FAM149B1 Gene

Function for FAM149B1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM149B1 Gene

Localization for FAM149B1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM149B1 Gene COMPARTMENTS Subcellular localization image for FAM149B1 gene
Compartment Confidence
cytoskeleton 1
cytosol 1
mitochondrion 1
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for FAM149B1 Gene

Pathways for FAM149B1 Gene

SuperPathways for FAM149B1 Gene

No Data Available

Interacting Proteins for FAM149B1 Gene

Gene Ontology (GO) - Biological Process for FAM149B1 Gene

None

No data available for Pathways by source for FAM149B1 Gene

Transcripts for FAM149B1 Gene

mRNA/cDNA for FAM149B1 Gene

(10) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM149B1 Gene

Family with sequence similarity 149, member B1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM149B1 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d ^ 6a · 6b ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b
SP1: - - - - -
SP2: - - -
SP3: -
SP4: - -
SP5: -

Relevant External Links for FAM149B1 Gene

GeneLoc Exon Structure for
FAM149B1
ECgene alternative splicing isoforms for
FAM149B1

Expression for FAM149B1 Gene

mRNA expression in normal human tissues for FAM149B1 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM149B1 Gene

SOURCE GeneReport for Unigene cluster for FAM149B1 Gene Hs.408577

genes like me logo Genes that share expressions with FAM149B1: view

Orthologs for FAM149B1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM149B1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM149B1 36
  • 99.43 (n)
  • 98.63 (a)
FAM149B1 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM149B1 36
  • 88.3 (n)
  • 87.06 (a)
FAM149B1 37
  • 83 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM149B1 36
  • 88.47 (n)
  • 85.89 (a)
FAM149B1 37
  • 85 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam149b 36
  • 83.8 (n)
  • 80.9 (a)
Fam149b 16
Fam149b 37
  • 80 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM149B1 37
  • 73 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 60 (a)
OneToMany
-- 37
  • 58 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Fam149b1 36
  • 82.33 (n)
  • 79.42 (a)
chicken
(Gallus gallus)
Aves FAM149B1 36
  • 63.03 (n)
  • 53.35 (a)
FAM149B1 37
  • 52 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM149B1 37
  • 48 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fam149b1 36
  • 54.07 (n)
  • 44.26 (a)
zebrafish
(Danio rerio)
Actinopterygii fam149b1 36
  • 54.04 (n)
  • 44.3 (a)
fam149b1 37
  • 34 (a)
OneToOne
Species with no ortholog for FAM149B1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM149B1 Gene

ENSEMBL:
Gene Tree for FAM149B1 (if available)
TreeFam:
Gene Tree for FAM149B1 (if available)

Paralogs for FAM149B1 Gene

Paralogs for FAM149B1 Gene

Pseudogenes.org Pseudogenes for FAM149B1 Gene

genes like me logo Genes that share paralogs with FAM149B1: view

Variants for FAM149B1 Gene

Sequence variations from dbSNP and Humsavar for FAM149B1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs15712 -- 73,232,365(+) CAACA(A/G)CTCTG intron-variant
rs753836 -- 73,218,259(+) GTTCT(C/T)TGCTC intron-variant
rs957486 -- 73,234,126(-) TCTCA(A/T)ACCTT intron-variant
rs1867565 -- 73,218,023(-) AAATT(A/G)TGTAT intron-variant
rs1867566 -- 73,217,777(-) GTAAT(C/T)CCCCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM149B1 Gene

Variant ID Type Subtype PubMed ID
nsv7132 CNV Loss 18451855

Relevant External Links for FAM149B1 Gene

HapMap Linkage Disequilibrium report
FAM149B1

Disorders for FAM149B1 Gene

Relevant External Links for FAM149B1

Genetic Association Database (GAD)
FAM149B1
genes like me logo Genes that share disorders with FAM149B1: view

No data available for UniProtKB/Swiss-Prot for FAM149B1 Gene

Publications for FAM149B1 Gene

  1. Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10231032) Nagase T. … Ohara O. (DNA Res. 1999) 2 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for FAM149B1 Gene

Sources for FAM149B1 Gene

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