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Aliases for FAM138F Gene

Subcategory (RNA class) for FAM138F Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FAM138F Gene

  • Family With Sequence Similarity 138, Member F 2 3
  • F379 Retina-Specific Protein 3
  • F379 3

External Ids for FAM138F Gene

ORGUL Members for FAM138F Gene

Summaries for FAM138F Gene

GeneCards Summary for FAM138F Gene

FAM138F (Family With Sequence Similarity 138, Member F) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM138F Gene

Genomics for FAM138F Gene

Genomic Location for FAM138F Gene

Start:
76,163 bp from pter
End:
77,690 bp from pter
Size:
1,528 bases
Orientation:
Minus strand

Genomic View for FAM138F Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM138F Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM138F Gene

Regulatory Elements for FAM138F Gene

Proteins for FAM138F Gene

Post-translational modifications for FAM138F Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM138F Gene

Domains for FAM138F Gene

Gene Families for FAM138F Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with FAM138F: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for FAM138F Gene

Function for FAM138F Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM138F Gene

Localization for FAM138F Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM138F Gene COMPARTMENTS Subcellular localization image for FAM138F gene
Compartment Confidence
cytosol 2
extracellular 2
golgi apparatus 1
mitochondrion 1
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for FAM138F Gene

Pathways for FAM138F Gene

SuperPathways for FAM138F Gene

No Data Available

Interacting Proteins for FAM138F Gene

Gene Ontology (GO) - Biological Process for FAM138F Gene

None

No data available for Pathways by source for FAM138F Gene

Transcripts for FAM138F Gene

mRNA/cDNA for FAM138F Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM138F Gene

No ASD Table

Relevant External Links for FAM138F Gene

GeneLoc Exon Structure for
FAM138F
ECgene alternative splicing isoforms for
FAM138F

Expression for FAM138F Gene

mRNA expression in normal human tissues for FAM138F Gene

genes like me logo Genes that share expressions with FAM138F: view

Orthologs for FAM138F Gene

Evolution for FAM138F Gene

ENSEMBL:
Gene Tree for FAM138F (if available)
TreeFam:
Gene Tree for FAM138F (if available)

No data available for Orthologs for FAM138F Gene

Paralogs for FAM138F Gene

No data available for Paralogs for FAM138F Gene

Variants for FAM138F Gene

Structural Variations from Database of Genomic Variants (DGV) for FAM138F Gene

Variant ID Type Subtype PubMed ID
nsv7879 CNV Gain+Loss 18304495
dgv2n71 CNV Gain 21882294
dgv1e1 CNV Complex 17122850
nsv428112 CNV Gain 18775914
dgv3e1 CNV Complex 17122850
esv27265 CNV Gain+Loss 19812545
nsv469759 CNV Loss 16826518
nsv471591 CNV Loss 15918152
nsv9651 CNV Gain+Loss 18304495
nsv910070 CNV Gain 21882294
nsv471520 CNV Duplication 19718026
esv994482 CNV Gain 20482838
nsv820962 CNV Duplication 20802225
esv22059 CNV Gain+Loss 19812545

Relevant External Links for FAM138F Gene

HapMap Linkage Disequilibrium report
FAM138F

No data available for Sequence variations from dbSNP and Humsavar for FAM138F Gene

Disorders for FAM138F Gene

No disorders were found for FAM138F Gene.

No data available for UniProtKB/Swiss-Prot for FAM138F Gene

Publications for FAM138F Gene

  1. Identification of a novel retina-specific gene located in a subtelomeric region with polymorphic distribution among multiple human chromosomes. (PMID: 11779631) Mah N. … Weber B.H.F. (Biochim. Biophys. Acta 2001) 2 3
  2. Diverse fates of paralogs following segmental duplication of telomeric genes. (PMID: 15233989) Wong A. … Ledbetter D.H. (Genomics 2004) 2 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM138F Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM138F
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM138F
    • Block miRNA regulation of FAM138F using miScript Target Protectors

    Sources for FAM138F Gene

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