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Aliases for FAM138D Gene

Subcategory (RNA class) for FAM138D Gene


Quality Score for this RNA gene is


Aliases for FAM138D Gene

  • Family With Sequence Similarity 138, Member D 2 3
  • F379 Retina-Specific Protein 3
  • F379 3

External Ids for FAM138D Gene

ORGUL Members for FAM138D Gene

Previous GeneCards Identifiers for FAM138D Gene

  • GC12U900769
  • GC12M000147

Summaries for FAM138D Gene

GeneCards Summary for FAM138D Gene

FAM138D (Family With Sequence Similarity 138, Member D) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM138D Gene

Genomics for FAM138D Gene

Regulatory Elements for FAM138D Gene

Genomic Location for FAM138D Gene

36,602 bp from pter
38,133 bp from pter
1,532 bases
Minus strand

Genomic View for FAM138D Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM138D Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM138D Gene

Proteins for FAM138D Gene

Post-translational modifications for FAM138D Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM138D Gene

Domains for FAM138D Gene

Suggested Antigen Peptide Sequences for FAM138D Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM138D Gene

Function for FAM138D Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM138D Gene

Localization for FAM138D Gene

Subcellular locations from

Jensen Localization Image for FAM138D Gene COMPARTMENTS Subcellular localization image for FAM138D gene
Compartment Confidence
cytosol 2
cytoskeleton 1
extracellular 1
golgi apparatus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FAM138D Gene

Pathways for FAM138D Gene

SuperPathways for FAM138D Gene

No Data Available

Interacting Proteins for FAM138D Gene

Gene Ontology (GO) - Biological Process for FAM138D Gene


No data available for Pathways by source for FAM138D Gene

Transcripts for FAM138D Gene

mRNA/cDNA for FAM138D Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM138D Gene

Family with sequence similarity 138, member D:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM138D Gene

No ASD Table

Relevant External Links for FAM138D Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM138D Gene

mRNA expression in normal human tissues for FAM138D Gene

Protein differential expression in normal tissues for FAM138D Gene

This gene is overexpressed in Serum (69.0).

Integrated Proteomics: protein expression from for FAM138D Gene

SOURCE GeneReport for Unigene cluster for FAM138D Gene Hs.722487

genes like me logo Genes that share expressions with FAM138D: view

Expression partners for FAM138D Gene

* - Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM138D Gene

Orthologs for FAM138D Gene

Evolution for FAM138D Gene

Gene Tree for FAM138D (if available)
Gene Tree for FAM138D (if available)

No data available for Orthologs for FAM138D Gene

Paralogs for FAM138D Gene

No data available for Paralogs for FAM138D Gene

Variants for FAM138D Gene

Sequence variations from dbSNP and Humsavar for FAM138D Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs2368791 -- 37,280(+) GTTTA(C/G)AGCTT intron-variant
rs2368793 -- 37,531(+) gtctc(C/T)ataaa intron-variant
rs2368794 -- 37,567(+) TAACT(C/T)GTCCA intron-variant
rs2368797 -- 37,700(+) ATCAT(A/G)GCCAG intron-variant
rs2368801 -- 38,260(+) CTGCC(A/G)CAAGT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM138D Gene

Variant ID Type Subtype PubMed ID
nsv8882 CNV Gain+Loss 18304495
nsv428269 CNV Gain+Loss 18775914
nsv832301 CNV Gain+Loss 17160897
esv24198 CNV Gain+Loss 19812545
nsv821041 CNV Duplication 20802225
nsv826169 CNV Gain 20364138

Relevant External Links for FAM138D Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM138D Gene

Disorders for FAM138D Gene

No disorders were found for FAM138D Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for FAM138D Gene

Publications for FAM138D Gene

  1. Identification of a novel retina-specific gene located in a subtelomeric region with polymorphic distribution among multiple human chromosomes. (PMID: 11779631) Mah N. … Weber B.H.F. (Biochim. Biophys. Acta 2001) 2 3
  2. Diverse fates of paralogs following segmental duplication of telomeric genes. (PMID: 15233989) Wong A. … Ledbetter D.H. (Genomics 2004) 2 3

Products for FAM138D Gene

Sources for FAM138D Gene

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