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Aliases for FAM138B Gene

Subcategory (RNA class) for FAM138B Gene


Quality Score for this RNA gene is


Aliases for FAM138B Gene

  • Family With Sequence Similarity 138, Member B 2 3
  • Chromosome 2 F379 Retina Specific Protein 3
  • F379 Retina-Specific Protein 3
  • BA395L14.6 3
  • F379 3

External Ids for FAM138B Gene

ORGUL Members for FAM138B Gene

Previous GeneCards Identifiers for FAM138B Gene

  • GC02U901151
  • GC02P114052
  • GC19M000076
  • GC02P114335

Summaries for FAM138B Gene

GeneCards Summary for FAM138B Gene

FAM138B (Family With Sequence Similarity 138, Member B) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM138B Gene

Genomics for FAM138B Gene

Regulatory Elements for FAM138B Gene

Genomic Location for FAM138B Gene

113,577,382 bp from pter
113,578,852 bp from pter
1,471 bases
Plus strand

Genomic View for FAM138B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM138B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM138B Gene

Proteins for FAM138B Gene

Post-translational modifications for FAM138B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM138B Gene

Domains for FAM138B Gene

Gene Families for FAM138B Gene

  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM138B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM138B Gene

Function for FAM138B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM138B Gene

Localization for FAM138B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM138B Gene

Pathways for FAM138B Gene

SuperPathways for FAM138B Gene

No Data Available

Interacting Proteins for FAM138B Gene

Gene Ontology (GO) - Biological Process for FAM138B Gene


No data available for Pathways by source for FAM138B Gene

Transcripts for FAM138B Gene

mRNA/cDNA for FAM138B Gene

(5) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM138B Gene

Family with sequence similarity 138, member B:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM138B

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM138B Gene

No ASD Table

Relevant External Links for FAM138B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM138B Gene

mRNA expression in normal human tissues for FAM138B Gene

SOURCE GeneReport for Unigene cluster for FAM138B Gene Hs.640260

genes like me logo Genes that share expressions with FAM138B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for FAM138B Gene

Orthologs for FAM138B Gene

Evolution for FAM138B Gene

Gene Tree for FAM138B (if available)
Gene Tree for FAM138B (if available)

No data available for Orthologs for FAM138B Gene

Paralogs for FAM138B Gene

No data available for Paralogs for FAM138B Gene

Variants for FAM138B Gene

Sequence variations from dbSNP and Humsavar for FAM138B Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs403917 -- 113,575,488(+) CTCCT(C/G)GCTAG upstream-variant-2KB
rs415337 -- 113,576,598(-) ATGGG(A/G)TGGGG upstream-variant-2KB
rs417470 -- 113,578,061(+) CAAAG(A/T)GTTGG nc-transcript-variant
rs455157 -- 113,576,612(-) GGAGG(C/G)TGCTG upstream-variant-2KB
rs2418670 -- 113,576,728(+) TTAAC(A/G)TACCA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM138B Gene

Variant ID Type Subtype PubMed ID
esv380 CNV CNV 17122850
nsv834334 CNV Gain 17160897
essv901 CNV CNV 17122850
nsv821507 CNV Duplication 20802225
esv24774 CNV Gain 19812545
nsv10133 CNV Gain 18304495

Relevant External Links for FAM138B Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM138B Gene

Disorders for FAM138B Gene

No disorders were found for FAM138B Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for FAM138B Gene

Publications for FAM138B Gene

  1. Identification of a novel retina-specific gene located in a subtelomeric region with polymorphic distribution among multiple human chromosomes. (PMID: 11779631) Mah N. … Weber B.H.F. (Biochim. Biophys. Acta 2001) 2 3
  2. Diverse fates of paralogs following segmental duplication of telomeric genes. (PMID: 15233989) Wong A. … Ledbetter D.H. (Genomics 2004) 2 3
  3. Gene content and function of the ancestral chromosome fusion site in human chromosome 2q13-2q14.1 and paralogous regions. (PMID: 12421752) Fan Y. … Trask B.J. (Genome Res. 2002) 3

Products for FAM138B Gene

Sources for FAM138B Gene

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