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Aliases for FAM133DP Gene

Aliases for FAM133DP Gene

  • Family With Sequence Similarity 133 Member D, Pseudogene 2 5
  • Family With Sequence Similarity 133, Member D, Pseudogene 2
  • Family With Sequence Similarity 133, Member A Pseudogene 3

External Ids for FAM133DP Gene

Previous GeneCards Identifiers for FAM133DP Gene

  • GC02M158237

Summaries for FAM133DP Gene

GeneCards Summary for FAM133DP Gene

FAM133DP (Family With Sequence Similarity 133 Member D, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM133DP Gene

Genomics for FAM133DP Gene

Regulatory Elements for FAM133DP Gene

Enhancers for FAM133DP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F157410 1.4 FANTOM5 Ensembl ENCODE 12.3 -36.2 -36166 11.7 TBP PKNOX1 ATF1 TBL1XR1 BMI1 CBX5 ETV6 CREM CBFB CEBPB CYTIP ACVR1 FAM133DP ERMN GPD2 LOC105373711 GC02M157436
GH02F156445 0.9 Ensembl ENCODE 12.1 +934.7 934692 1.6 CBX3 TBL1XR1 RAD21 CHAMP1 CBX5 FOS ZNF654 CEBPB REST POLR2H GPD2 FAM133DP PIR36097
GH02F157394 0.2 ENCODE 0.3 -15.3 -15260 1.7 NFIL3 RFX1 RFX3 FOXA3 CEBPA ZNF384 KAT2B LOC105373711 FAM133DP
GH02F157402 0.8 Ensembl ENCODE 0.3 -23.4 -23417 2.1 PKNOX1 TBL1XR1 EBF1 CBX5 EED ETV6 CREM CHD2 MTA2 CBFB ERMN CYTIP LOC105373711 FAM133DP
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAM133DP on UCSC Golden Path with GeneCards custom track

Promoters for FAM133DP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001828540 108 400

Genomic Location for FAM133DP Gene

Chromosome:
2
Start:
157,378,487 bp from pter
End:
157,380,509 bp from pter
Size:
2,023 bases
Orientation:
Minus strand

Genomic View for FAM133DP Gene

Genes around FAM133DP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM133DP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM133DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM133DP Gene

Proteins for FAM133DP Gene

Post-translational modifications for FAM133DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM133DP Gene

Domains & Families for FAM133DP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM133DP Gene

Function for FAM133DP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM133DP Gene

Localization for FAM133DP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM133DP Gene

Pathways & Interactions for FAM133DP Gene

SuperPathways for FAM133DP Gene

No Data Available

Interacting Proteins for FAM133DP Gene

Gene Ontology (GO) - Biological Process for FAM133DP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM133DP Gene

Transcripts for FAM133DP Gene

mRNA/cDNA for FAM133DP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM133DP Gene

No ASD Table

Relevant External Links for FAM133DP Gene

GeneLoc Exon Structure for
FAM133DP
ECgene alternative splicing isoforms for
FAM133DP

Expression for FAM133DP Gene

mRNA expression in normal human tissues for FAM133DP Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM133DP Gene:

FAM133DP
genes like me logo Genes that share expression patterns with FAM133DP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAM133DP Gene

Orthologs for FAM133DP Gene

Evolution for FAM133DP Gene

ENSEMBL:
Gene Tree for FAM133DP (if available)
TreeFam:
Gene Tree for FAM133DP (if available)

No data available for Orthologs for FAM133DP Gene

Paralogs for FAM133DP Gene

No data available for Paralogs for FAM133DP Gene

Variants for FAM133DP Gene

Sequence variations from dbSNP and Humsavar for FAM133DP Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs113472483 -- 157,380,825(+) CTGAA(C/T)GGAGA upstream-variant-2KB
rs115274720 -- 157,382,297(+) TATCT(A/G)TACAA upstream-variant-2KB
rs117958838 -- 157,381,273(+) GAGAA(C/T)CTGCA upstream-variant-2KB
rs12622735 -- 157,382,093(+) TGGCT(A/G)GATAA upstream-variant-2KB
rs139190299 -- 157,380,973(+) AAGAG(C/G)AAGTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM133DP Gene

Variant ID Type Subtype PubMed ID
nsv1011505 CNV gain 25217958
nsv2989 CNV insertion 18451855
nsv834432 CNV gain 17160897
nsv963737 CNV duplication 23825009

Relevant External Links for FAM133DP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM133DP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM133DP Gene

Disorders for FAM133DP Gene

Relevant External Links for FAM133DP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM133DP

No disorders were found for FAM133DP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM133DP Gene

Publications for FAM133DP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FAM133DP Gene

Sources for FAM133DP Gene

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