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Aliases for FAM110D Gene

Aliases for FAM110D Gene

  • Family With Sequence Similarity 110, Member D 2 3
  • Glycine/Arginine Rich Protein 1 2 3
  • GRRP1 3 4
  • Glycine/Arginine-Rich Protein 1 3
  • Protein FAM110D 3

External Ids for FAM110D Gene

Previous Symbols for FAM110D Gene

  • GRRP1

Summaries for FAM110D Gene

GeneCards Summary for FAM110D Gene

FAM110D (Family With Sequence Similarity 110, Member D) is a Protein Coding gene. An important paralog of this gene is FAM110A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM110D Gene

Genomics for FAM110D Gene

Genomic Location for FAM110D Gene

Start:
26,159,020 bp from pter
End:
26,162,628 bp from pter
Size:
3,609 bases
Orientation:
Plus strand

Genomic View for FAM110D Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM110D Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM110D Gene

No data available for Regulatory Elements for FAM110D Gene

Proteins for FAM110D Gene

  • Protein details for FAM110D Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TAY7-F110D_HUMAN
    Recommended name:
    Protein FAM110D
    Protein Accession:
    Q8TAY7
    Secondary Accessions:
    • A8K3V0
    • Q9H7Z4

    Protein attributes for FAM110D Gene

    Size:
    271 amino acids
    Molecular mass:
    28710 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB14829.1; Type=Frameshift; Positions=90; Evidence={ECO:0000305};

neXtProt entry for FAM110D Gene

Proteomics data for FAM110D Gene at MOPED

Post-translational modifications for FAM110D Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM110D Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM110D Gene

Domains for FAM110D Gene

Protein Domains for FAM110D Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

F110D_HUMAN
Family:
  • Belongs to the FAM110 family.:
    • Q8TAY7
genes like me logo Genes that share domains with FAM110D: view

No data available for Gene Families for FAM110D Gene

Function for FAM110D Gene

miRNA for FAM110D Gene

miRTarBase miRNAs that target FAM110D

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for FAM110D Gene

Localization for FAM110D Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM110D Gene

Pathways for FAM110D Gene

SuperPathways for FAM110D Gene

No Data Available

Interacting Proteins for FAM110D Gene

Gene Ontology (GO) - Biological Process for FAM110D Gene

None

No data available for Pathways by source for FAM110D Gene

Transcripts for FAM110D Gene

mRNA/cDNA for FAM110D Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(20) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM110D Gene

Family with sequence similarity 110, member D:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM110D Gene

No ASD Table

Relevant External Links for FAM110D Gene

GeneLoc Exon Structure for
FAM110D
ECgene alternative splicing isoforms for
FAM110D

Expression for FAM110D Gene

mRNA expression in normal human tissues for FAM110D Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FAM110D Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (4.5).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM110D Gene

SOURCE GeneReport for Unigene cluster for FAM110D Gene Hs.694119

genes like me logo Genes that share expressions with FAM110D: view

Orthologs for FAM110D Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM110D Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM110D 36
  • 99.38 (n)
  • 99.26 (a)
FAM110D 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM110D 36
  • 89.14 (n)
  • 90 (a)
FAM110D 37
  • 87 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM110D 36
  • 89.91 (n)
  • 91.88 (a)
FAM110D 37
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Grrp1 36
  • 86.47 (n)
  • 87.08 (a)
Grrp1 16
Grrp1 37
  • 82 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam110d 36
  • 85.12 (n)
  • 87.82 (a)
chicken
(Gallus gallus)
Aves FAM110D 36
  • 59.51 (n)
  • 55.47 (a)
FAM110D 37
  • 34 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM110D 37
  • 45 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii FAM110D 37
  • 22 (a)
OneToOne
si:ch211-107n13.1 36
  • 53.86 (n)
  • 50 (a)
Species with no ortholog for FAM110D:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM110D Gene

ENSEMBL:
Gene Tree for FAM110D (if available)
TreeFam:
Gene Tree for FAM110D (if available)

Paralogs for FAM110D Gene

Paralogs for FAM110D Gene

genes like me logo Genes that share paralogs with FAM110D: view

Variants for FAM110D Gene

Sequence variations from dbSNP and Humsavar for FAM110D Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1335762 -- 26,158,800(-) GAGCC(A/G)GGACT upstream-variant-2KB
rs2783708 -- 26,159,523(-) CAGTG(C/G)GTCAG intron-variant, upstream-variant-2KB
rs2783709 -- 26,157,675(-) gtgac(A/G)tgatc upstream-variant-2KB
rs3748854 -- 26,159,026(+) AGTGA(C/G)GTTTG utr-variant-5-prime, upstream-variant-2KB
rs3748855 -- 26,159,252(+) CAGAG(C/T)TGAGA intron-variant, upstream-variant-2KB

Relevant External Links for FAM110D Gene

HapMap Linkage Disequilibrium report
FAM110D

No data available for Structural Variations from Database of Genomic Variants (DGV) for FAM110D Gene

Disorders for FAM110D Gene

No disorders were found for FAM110D Gene.

No data available for UniProtKB/Swiss-Prot for FAM110D Gene

Publications for FAM110D Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4

Products for FAM110D Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM110D
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM110D
    • Block miRNA regulation of FAM110D using miScript Target Protectors

    Sources for FAM110D Gene

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