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Aliases for FAM106A Gene

Subcategory (RNA class) for FAM106A Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM106A Gene

  • Family With Sequence Similarity 106, Member A 2 3

External Ids for FAM106A Gene

Summaries for FAM106A Gene

GeneCards Summary for FAM106A Gene

FAM106A (Family With Sequence Similarity 106, Member A) is a RNA Gene, and belongs to ncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM106A Gene

Genomics for FAM106A Gene

Genomic Location for FAM106A Gene

Start:
18,524,566 bp from pter
End:
18,526,846 bp from pter
Size:
2,281 bases
Orientation:
Minus strand

Genomic View for FAM106A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM106A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM106A Gene

Regulatory Elements for FAM106A Gene

Proteins for FAM106A Gene

  • Protein details for FAM106A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q4KMX7-F106A_HUMAN
    Recommended name:
    Protein FAM106A
    Protein Accession:
    Q4KMX7
    Secondary Accessions:
    • Q9HAD1

    Protein attributes for FAM106A Gene

    Size:
    169 amino acids
    Molecular mass:
    18795 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM106A Gene

Proteomics data for FAM106A Gene at MOPED

Post-translational modifications for FAM106A Gene

No Post-translational modifications

Other Protein References for FAM106A Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for FAM106A Gene

Domains for FAM106A Gene

Protein Domains for FAM106A Gene

ProtoNet:

UniProtKB/Swiss-Prot:

F106A_HUMAN
Family:
  • Belongs to the FAM106 family.:
    • Q4KMX7
genes like me logo Genes that share domains with FAM106A: view

No data available for Gene Families for FAM106A Gene

Function for FAM106A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM106A Gene

Localization for FAM106A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM106A Gene COMPARTMENTS Subcellular localization image for FAM106A gene
Compartment Confidence
extracellular 2
cytosol 1
mitochondrion 1
nucleus 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for FAM106A Gene

Pathways for FAM106A Gene

SuperPathways for FAM106A Gene

No Data Available

Interacting Proteins for FAM106A Gene

Gene Ontology (GO) - Biological Process for FAM106A Gene

None

No data available for Pathways by source for FAM106A Gene

Transcripts for FAM106A Gene

mRNA/cDNA for FAM106A Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM106A Gene

Family with sequence similarity 106, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM106A Gene

No ASD Table

Relevant External Links for FAM106A Gene

GeneLoc Exon Structure for
FAM106A
ECgene alternative splicing isoforms for
FAM106A

Expression for FAM106A Gene

mRNA expression in normal human tissues for FAM106A Gene

SOURCE GeneReport for Unigene cluster for FAM106A Gene Hs.674403

genes like me logo Genes that share expressions with FAM106A: view

Orthologs for FAM106A Gene

Evolution for FAM106A Gene

ENSEMBL:
Gene Tree for FAM106A (if available)
TreeFam:
Gene Tree for FAM106A (if available)

No data available for Orthologs for FAM106A Gene

Paralogs for FAM106A Gene

Selected SIMAP similar genes for FAM106A Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for FAM106A Gene

genes like me logo Genes that share paralogs with FAM106A: view

No data available for Paralogs for FAM106A Gene

Variants for FAM106A Gene

Sequence variations from dbSNP and Humsavar for FAM106A Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs573640 -- 18,526,110(+) AGTTA(C/T)GATCA nc-transcript-variant
rs628620 -- 18,527,916(+) TGACC(C/T)CAGAT upstream-variant-2KB
rs1682263 -- 18,527,070(+) aagca(A/G)ttctc upstream-variant-2KB
rs2456100 -- 18,527,454(+) CCAAC(A/G/T)CACCC upstream-variant-2KB
rs2462977 -- 18,527,494(-) GACTG(C/G)ACTAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM106A Gene

Variant ID Type Subtype PubMed ID
nsv428333 CNV Gain 18775914
dgv932e1 CNV Complex 17122850
nsv827913 CNV Gain 20364138
nsv833388 CNV Loss 17160897
nsv469661 CNV Gain 16826518
nsv9504 CNV Gain+Loss 18304495
dgv3079n71 CNV Gain 21882294
nsv511593 CNV Loss 21212237
esv2670394 CNV Deletion 23128226
nsv907781 CNV Loss 21882294
nsv442738 CNV CNV 18776908
nsv511052 CNV Complex 20534489

Relevant External Links for FAM106A Gene

HapMap Linkage Disequilibrium report
FAM106A

Disorders for FAM106A Gene

No disorders were found for FAM106A Gene.

No data available for UniProtKB/Swiss-Prot for FAM106A Gene

Publications for FAM106A Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  3. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM106A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM106A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM106A
    • Block miRNA regulation of FAM106A using miScript Target Protectors

    Sources for FAM106A Gene

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