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Aliases & Descriptions for F2RL3
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| PAR-4 3 | | PAR4 1, 2, 3, 5 |
| | | Descriptions |
|---|
| Coagulation factor II receptor-like 3 3 | | Thrombin receptor-like 3 3 | | coagulation factor II (thrombin) receptor-like 3 2 | | protease-activated receptor-4 2 | | proteinase-activated receptor-4 2 |
|
| | Search outside databases for aliases for F2RL3 genePrevious GC identifers: GC19P017493 GC19P017392 GC19P016845 |
Summaries for F2RL3(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for F2RL3: Coagulation factor II (thrombin) receptor-like 3 (F2RL3) is a member of the large family of 7-transmembrane-region receptors that couple to guanosine-nucleotide-binding proteins. F2RL3 is also a member of the protease-activated receptor family. F2RL3 is activated by proteolytic cleavage of its extracellular amino terminus. The new amino terminus functions as a tethered ligand and activates the receptor. F2RL3 is activated by thrombin and trypsin. [provided by RefSeq] UniProtKB/Swiss-Prot: PAR4_HUMAN, Q96RI0Function: Receptor for activated thrombin or trypsin coupled to G proteins that stimulate phosphoinositide hydrolysis. May play a role in platelets activationGene Wiki entry for F2RL3 |
Genomic Location for F2RL3
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the F2RL3 gene 
Entrez Gene cytogenetic band: 19p12 Ensembl cytogenetic band: 19p13.11 HGNC cytogenetic band: 19p12F2RL3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19P016860:
(about GC identifiers)
Start:
|
16,860,826 bp from pter |
End:
|
16,863,830 bp from pter |
Size:
|
3,005 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000019.8 NT_011295.10
| Proteins for F2RL3
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PAR4_HUMAN, Q96RI0 (See
protein sequence)Recommended Name: Proteinase-activated receptor 4 precursor Size: 385 amino acids; 41133 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
PDB structures from and Proteopedia :2ZPK (3D)
 
Secondary accessions: O76067 Q6DK42Post-translational modifications:
A proteolytic cleavage generates a new N-terminus that functions as a tethered ligand1
REFSEQ proteins: NP_003941.2
ENSEMBL proteins: ENSP00000248076
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for F2RL3: Assays for F2RL3: | Protein
Domains/ Families for F2RL3(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q96RI0
ProtoNet protein and cluster: Q96RI0 2 Blocks protein families: IPB003912 Protease activated receptor precursor signature IPB003944 Protease activated receptor 2 precursor signature
UniProtKB/Swiss-Prot: PAR4_HUMAN, Q96RI0Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for F2RL3
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003950
Applied Biosystems Silencer® siRNAs for F2RL3
Sigma-Aldrich siRNA and siRNA Panels for F2RL3  Sigma-Aldrich shRNA Panels and shRNA for F2RL3  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_003950                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003950                                  untagged cDNA clone in CMV expression vector: NM_003950 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003950
UniProtKB/Swiss-Prot: PAR4_HUMAN, Q96RI0Function: Receptor for activated thrombin or trypsin coupled to G proteins that stimulate phosphoinositide hydrolysis. May play a role in platelets activationGenatlas biochemistry entry for F2RL3:proteinase-activated receptor 4,expressed in pancreas,testis,lung,thyroid,small intestine,G protein coupled receptor superfamily,activated by thrombin or trypsin3 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for F2rl3):
3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for F2RL3
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Sigma-Aldrich "Your Favorite Gene" Pathway for F2RL3 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for F2RL3 
5/29 Interacting proteins for F2RL3 (ENSP000002480763) via UniProtKB, MINT, and/or STRING (see all 29
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for F2RL3(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for F2RL3 |
Compounds for F2RL3 available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| tcY-NH2 | Selective PAR4 antagonist | [327177-34-4] | | PAR 4 (1-6) | PAR4 peptide fragment; acts as a PAR4 agonist | [225779-44-2] | | AY-NH2 | Selective PAR4 agonist | [352017-71-1] | About this table
6 Novoseek chemical compound relationships for F2RL3 gene
About this table
|
Transcripts for F2RL3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003950
Sigma-Aldrich siRNA and siRNA Panels for F2RL3  Sigma-Aldrich shRNA Panels and shRNA for F2RL3  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_003950 REFSEQ mRNAs for F2RL3 gene: NM_003950.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_003950               OriGene GFP tagged cDNA clone in CMV expression vector: NM_003950                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003950                                  untagged cDNA clone in CMV expression vector: NM_003950  Additional cDNA sequence: AF055917.1 AF080214.1 AY431102.1 BC074782.2 1 DOTS entry: DT.75100765 15 AceView cDNA sequences:BC074782 BQ286510 AW207357 AW206493 AY431102 AF055917 AI344017 AW138148 AW104737 NM_003950 BG142112 BQ269855 AI739295 AF080214 AW168359
highest scoring ESTs for F2RL3:AF055917 AF080214 AI344017 AI739295 AW138148 AW168359 AW206493 AW207357 AY431102 BC074782 Unigene Cluster for F2RL3: Coagulation factor II (thrombin) receptor-like 3 Hs.137574 [show with all ESTs]Unigene Representative Sequence: AF055917
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000248076
|
Expression for F2RL3
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| F2RL3 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for F2RL3
1 / 2 / 3 3 probe-sets matching F2RL3 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TGGCGGCAGA
SOURCE GeneReport for Unigene cluster: Hs.137574
Expression variation in blood from EXPOLDB for F2RL3 UniProtKB/Swiss-Prot: PAR4_HUMAN, Q96RI0Tissue specificity: Widely expressed, with highest levels in lung, pancreas, thyroid, testis and small intestine. Not expressed in brain, kidney, spinal cord and peripheral blood leukocytes. Also detected in platelets |
Orthologs for F2RL3
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for F2RL3 gene from 5/6 species (see all 6
)
About this table Species with no ortholog for F2RL3
ENSEMBL Gene Tree for F2RL3 | Paralogs for F2RL3(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for F2RL3 gene
- P2RY82 GPR182 F2RL12 F2R2 F2RL22
|
SNPs/Variants for F2RL3(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for F2RL3 (up to first 250kb)
|
Disorders & Mutations for F2RL3
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602779
9 Novoseek disease relationships for F2RL3 gene
About this table
Human Genome Epidemiology Navigator: F2RL3 (1 document)
|
Medical News for F2RL3(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for F2RL3 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/144 PubMed articles for F2RL3 gene (see all 144
):- Cloning and characterization of human protease-activated receptor 4. (PubMed id 9618465)1, 2, 3, 4 Xu W.-F.... Foster D.C. (1998)
- Protease-activated receptors 1 and 4 mediate activation of human platelets by thrombin. (PubMed id 10079109)1, 3, 4 Kahn M.L....Coughlin S.R. (1999)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Gene and locus structure and chromosomal localization of the protease-activated receptor gene family. (PubMed id 9722561)3, 4 Kahn M.L....Coughlin S.R. (1998)
- A dual thrombin receptor system for platelet activation. (PubMed id 9716134)3, 4 Kahn M.L.... Coughlin S.R. (1998)
- The role of PAR4 in thrombin-induced thromboxane production in human platelets. (PubMed id 12888878)1, 3 Wu C.C....Teng C.M. (2003)
- Protease-activated receptor 4 uses anionic residues to interact with alpha-thrombin in the absence or presence of protease-activated receptor 1. (PubMed id 19053259)1, 3 Nieman M.T. (2008)
- Thrombin-induced platelet PAR4 activation: role of glycoprotein Ib and ADP. (PubMed id 12871418)1, 3 Adam F....Jandrot-Perrus M. (2003)
- Activation of protease-activated receptor (PAR)-1, PAR-2, and PAR-4 stimulates IL-6, IL-8, and prostaglandin E2 release from human respiratory epithelial cells. (PubMed id 11907122)1, 3 Asokananthan N....Stewart G.A. (2002)
- PAR-4 agonist AYPGKF stimulates thromboxane production by human platelets. (PubMed id 12006403)1, 3 Henriksen R.A. and Hanks V.K. (2002)
|
Search for F2RL3
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing F2RL3
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing F2RL3
(According to HUGE)
About This Section
| -- |
Specialized Databases showing F2RL3(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| SeattleSNPs | http://pga.gs.washington.edu/data/f2rl3/ |
|
| | | About This Section
| --
| Services for F2RL3(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for F2RL3:

 | |
 | | | | |
|
 |  |  |
| | | | Tocris compounds for F2RL3 |
|
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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