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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

F2RL1 Gene

protein-coding   GIFtS: 62
GCID: GC05P076120

coagulation factor II (thrombin) receptor-like 1


(Previous symbol: GPR11)
 Explore 105 diseases affiliated with
F2RL1 via our new
 Human Malady Compendium 
Biological research products
for F2RL1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Coagulation Factor II (Thrombin) Receptor-Like 11 2     G-Protein Coupled Receptor 112 3
GPR111 2 3 5     Protease-Activated Receptor 22
PAR21 2 3 5     Proteinase-Activated Receptor 22
Coagulation Factor II Receptor-Like 12 3     PAR-23
Thrombin Receptor-Like 12 3     

External Ids:    HGNC: 35381   Entrez Gene: 21502   Ensembl: ENSG000001642517   OMIM: 6009335   UniProtKB: P550853   

Export aliases for F2RL1 gene to outside databases

Previous GC identifers: GC05P074920 GC05P076349 GC05P076153 GC05P076198 GC05P076150 GC05P071322


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for F2RL1:
Coagulation factor II (thrombin) receptor-like 1 (F2RL1) is a member of the large family of 7-transmembrane-region
receptors that couple to guanosine-nucleotide-binding proteins. F2RL1 is also a member of the protease-activated
receptor family. It is activated by trypsin, but not by thrombin. It is activated by proteolytic cleavage of its
extracellular amino terminus. The new amino terminus functions as a tethered ligand and activates the receptor. The
F2RL1 gene contains two exons and is widely expressed in human tissues. The predicted protein sequence is 83%
identical to the mouse receptor sequence. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085
Function: Receptor for trypsin and trypsin-like enzymes coupled to G proteins. Its function is mediated through the
activation of several signaling pathways including phospholipase C (PLC), intracellular calcium, mitogen-activated
protein kinase (MAPK), I-kappaB kinase/NF-kappaB and Rho. Can also be transactivated by cleaved F2R/PAR1. Involved in
modulation of inflammatory responses and regulation of innate and adaptive immunity, and acts as a sensor for
proteolytic enzymes generated during infection. Generally is promoting inflammation. Can signal synergistically with
TLR4 and probably TLR2 in inflammatory responses and modulates TLR3 signaling. Has a protective role in establishing
the endothelial barrier; the activity involves coagulation factor X. Proposed to have a bronchoprotective role in
airway epithelium, but also shown to compromise the airway epithelial barrier by interrupting E-cadherin adhesion.
Involved in the regulation of vascular tone; activation results in hypotension presumably mediated by vasodilation.
Associates with a subset of G proteins alpha subunits such as G alpha-q, G alpha-11, G alpha-14, G alpha-12 and G
alpha-13, but probably not with G(o) alpha, G(i) subunit alpha-1 and G(i) subunit alpha-2. However, according to
PubMed:21627585 can signal through G(i) subunit alpha. Believed to be a class B receptor which internalizes as a
complex with arrestin and traffic with it to endosomal vesicles, presumably as desensitized receptor, for extended
periods of time. Mediates inhibition of TNF-alpha stimulated JNK phosphorylation via coupling to G alpha-q/11; the
function involves dissociation of RIPK1 and TRADD from TNFR1. Mediates phosphorylation of nuclear factor NF-kappa-B
RELA subunit at 'Ser-536'; the function involves IKBKB and is predominantly independent of G proteins. Involved in
cellular migration. Involved in cytoskeletal rearrangement and chemotaxis through beta-arrestin-promoted scaffolds;
the function is independent of G alpha-q/11 and involves promotion of cofilin dephosphoryltaion and actin filament
severing. Induces redistribution of COPS5 from the plasma membrane to the cytosol and activation of the JNK cascade is
mediated by COPS5. Involved in the recruitment of leukocytes to the sites of inflammation and is the major PAR
receptor capable of modulating eosinophil function such as proinflammatory cytokine secretion, superoxide production
and degranulation. During inflammation promotes dendritic cell maturation, trafficking to the lymph nodes and
subsequent T-cell activation. Involved in antimicrobial response of innate immnune cells; activation enhances
phagocytosis of Gram-positive and killing of Gram-negative bacteria. Acts synergistically with interferon-gamma in
enhancing antiviral responses. Implicated in a number of acute and chronic inflammatory diseases such as of the
joints, lungs, brain, gastrointestinal tract, periodontium, skin, and vascular systems, and in autoimmune disorders

summary for F2RL1:
Protease-activated receptors (PARs, also known as thrombin receptors) are G-protein-coupled receptors,
activated by cleavage of their N-terminal domains by serine proteases. Hydrolysis reveals a tethered peptide
ligand, which interacts with the receptor within extracellular loop-2 to affect transmembrane signaling.
Four subtypes of receptors have so far been cloned (PAR1-4). PAR2 is expressed in vascular tissue and highly
vascular organs, which indicates a role for this receptor in the regulation of vascular tone. Trypsin is the
endogenous agonist for PAR2 and receptor activation has been coupled to the nitric oxide signaling pathway,
causing vasodilation and hypotension. PAR2 is implicated in chronic responses associated with vessel
inflammation and wound healing. This receptor stimulates activation of T-cells and neutrophils, promotes
leukocyte rolling, adhesion and extravasation, increases capillary permeability and enhances production of
cytokines. In addition to its vascular roles, PAR2 has multiple functions in the gastrointestinal tract. It
is strongly expressed in enterocytes and stimulates prostaglandin (PG) E2 and PGF1alpha synthesis.
Pancreatic PAR2 expression and activation promotes secretory function, in particular increases amylin
secretion.

Gene Wiki entry for F2RL1 (Protease activated receptor 2)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000005.9  NC_018916.1  NT_006713.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the F2RL1 gene promoter:
         AREB6   c-Fos   RFX1   AP-1   HNF-1   Sox9   c-Jun   HNF-1A   GATA-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidF2RL1 promoter sequence
   Search SABiosciences Chromatin IP Primers for F2RL1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat F2RL1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q13   Ensembl cytogenetic band:  5q13.3   HGNC cytogenetic band: 5q13

F2RL1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
F2RL1 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05P076120:  view genomic region     (about GC identifiers)

Start:
76,114,758 bp from pter      End:
76,131,140 bp from pter
Size:
16,383 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085 (See protein sequence)
Recommended Name: Proteinase-activated receptor 2 precursor  
Size: 397 amino acids; 44126 Da
Subunit: Interacts with TLR4, COPS5 and TMED2. Interacts with GNAQ, GNA11, GNA12, GNA13 and GNA14 (By similarity)
Subcellular location: Cell membrane; Multi-pass membrane protein
Miscellaneous: Synthetic PAR agonist peptides (APs) that mimic the first six amino acids of the newly formed N-terminus
activate the native, uncleaved receptor nonenzymatically by binding directly to the corresponding second extracellular
loop to mediate signaling
Secondary accessions: Q13317 Q13346 Q53XJ8

Explore the universe of human proteins at neXtProt for F2RL1: NX_P55085

Post-translational modifications:

  • A proteolytic cleavage generates a new N-terminus that functions as a tethered ligand. Activating serine proteases
  • include trypsin, mast cell tryptase, coagulation factors VII and Xa, myeloblastin/PRTN3 and membrane-type serine
    protease 1/ST14. Proposed subsequent cleaveage by serine proteases is leading to receptor deactivation and include
    neutrophil elastase and cathepsin G. At least in part, implicated proteases are also shown to activate the receptor;
    the glycosylation status of the receptor is thought to contribute to the difference. In addition to conventional
    trypsin-like proteases is proposed to be activated by other proteases and glycosidases derived from bacteria, fungi
    and insects: serine protease allergens such as dust mite Der p3 and Der p9 and mold Pen c13, Porphyromonas gingivalis
    arginine-specific (trypsin-like) cysteine proteinases called gingipains, Streptomyces griseus exogenous chitinase, and
    an Alternaria alternata aspartate protease. Cleavage by the Alternaria alternata aspartate protease generates
    non-conventional processed forms1
  • N-glycosylated and sialylated1
  • Multiple phosphorylated on serine and threonine residues in the cytoplasmic region upon receptor activation; required
  • for receptor desensitization and recruitment of beta-arrestin1
  • Monoubiquitinated by CBL at the plasma membrane and in early endosomes; not required for receptor endocytosis but for
  • translocation to late endosomes or lysosomes. Deubiquitination involves STAMBP and USP8; required for lysosomal
    trafficking and receptor degradation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P55085

  • F2RL1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_005233.3  
    ENSEMBL proteins: 
     ENSP00000425622   ENSP00000296677  
    Reactome Protein details: P55085
    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant F2RL1 Protein
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    Novus Biologicals F2RL1 Proteins
    Novus Biologicals F2RL1 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for F2RL1

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005794Golgi apparatus TAS8615752
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane IDA17848177
    GO:0016021integral to membrane ----
    GO:0031143pseudopodium ISS--


    F2RL1 for ontologies           About GeneDecksing



    F2RL1 Antibody Products: 
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    Uscn Antibodies for F2RL1
    Search ThermoFisher Antibodies for F2RL1

    Assay Products for F2RL1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
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    GenScript F2RL1-overexpressing Cell Line for Assay
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for F2RL1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    F2RL1 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR002281 Pro_rcpt_2
     IPR017452 GPCR_Rhodpsn_7TM
     IPR003912 Protea_act_rcpt
     IPR000276 GPCR_Rhodpsn

    Graphical View of Domain Structure for InterPro Entry P55085

    ProtoNet protein and cluster: P55085

    2 Blocks protein families:
    IPB002281 Protease activated receptor 2 precursor signature
    IPB003912 Protease activated receptor precursor signature


    UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085
    Similarity: Belongs to the G-protein coupled receptor 1 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085
    Function: Receptor for trypsin and trypsin-like enzymes coupled to G proteins. Its function is mediated through the
    activation of several signaling pathways including phospholipase C (PLC), intracellular calcium, mitogen-activated
    protein kinase (MAPK), I-kappaB kinase/NF-kappaB and Rho. Can also be transactivated by cleaved F2R/PAR1. Involved in
    modulation of inflammatory responses and regulation of innate and adaptive immunity, and acts as a sensor for
    proteolytic enzymes generated during infection. Generally is promoting inflammation. Can signal synergistically with
    TLR4 and probably TLR2 in inflammatory responses and modulates TLR3 signaling. Has a protective role in establishing
    the endothelial barrier; the activity involves coagulation factor X. Proposed to have a bronchoprotective role in
    airway epithelium, but also shown to compromise the airway epithelial barrier by interrupting E-cadherin adhesion.
    Involved in the regulation of vascular tone; activation results in hypotension presumably mediated by vasodilation.
    Associates with a subset of G proteins alpha subunits such as G alpha-q, G alpha-11, G alpha-14, G alpha-12 and G
    alpha-13, but probably not with G(o) alpha, G(i) subunit alpha-1 and G(i) subunit alpha-2. However, according to
    PubMed:21627585 can signal through G(i) subunit alpha. Believed to be a class B receptor which internalizes as a
    complex with arrestin and traffic with it to endosomal vesicles, presumably as desensitized receptor, for extended
    periods of time. Mediates inhibition of TNF-alpha stimulated JNK phosphorylation via coupling to G alpha-q/11; the
    function involves dissociation of RIPK1 and TRADD from TNFR1. Mediates phosphorylation of nuclear factor NF-kappa-B
    RELA subunit at 'Ser-536'; the function involves IKBKB and is predominantly independent of G proteins. Involved in
    cellular migration. Involved in cytoskeletal rearrangement and chemotaxis through beta-arrestin-promoted scaffolds;
    the function is independent of G alpha-q/11 and involves promotion of cofilin dephosphoryltaion and actin filament
    severing. Induces redistribution of COPS5 from the plasma membrane to the cytosol and activation of the JNK cascade is
    mediated by COPS5. Involved in the recruitment of leukocytes to the sites of inflammation and is the major PAR
    receptor capable of modulating eosinophil function such as proinflammatory cytokine secretion, superoxide production
    and degranulation. During inflammation promotes dendritic cell maturation, trafficking to the lymph nodes and
    subsequent T-cell activation. Involved in antimicrobial response of innate immnune cells; activation enhances
    phagocytosis of Gram-positive and killing of Gram-negative bacteria. Acts synergistically with interferon-gamma in
    enhancing antiviral responses. Implicated in a number of acute and chronic inflammatory diseases such as of the
    joints, lungs, brain, gastrointestinal tract, periodontium, skin, and vascular systems, and in autoimmune disorders

         Genatlas biochemistry entry for F2RL1:
    coagulation factor II (thrombin) receptor proteinase-activated receptor 2,G protein coupled receptor superfamily

    miRNA
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    hsa-miR-142-5p hsa-miR-4324 hsa-miR-548e hsa-miR-548o hsa-miR-551b* hsa-miR-340 hsa-miR-4282 hsa-miR-3921
    SwitchGear 3'UTR luciferase reporter plasmidF2RL1 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for F2RL1 (see all 7)
    OriGene shRNA RFP: F2RL1
    OriGene siRNA: F2RL1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat F2RL1

    Gene Editing
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    DNA2.0 Custom Protein Engineering Service for F2RL1

    Clone
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    EMD Millipore Clones for the Expression of F2RL1
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    GenScript: all cDNA clones in your preferred vector: F2RL1 (NM_005242)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat F2RL1 

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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for F2RL1

    Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001965G-protein alpha-subunit binding ISS--
    GO:0004872receptor activity TAS8615752
    GO:0004930G-protein coupled receptor activity ISS--
    GO:0005102receptor binding TAS8615752
    GO:0005515protein binding IPI--


    F2RL1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for F2RL1:
     Decreased viability of wild-ty 

    Animal Models:
         Mouse knock-outs for F2RL1: F2rl1tm1Jkaw F2rl1tm1Bpd F2rl1tm1Cgh F2rl1tm1Mslb
         15/17 MGI mutant phenotypes (inferred from 7 alleles(MGI details for F2rl1) (see all 17):
     behavior/neurological  cardiovascular system  cellular  embryogenesis  endocrine/exocrine gland 
     hematopoietic system  homeostasis/metabolism  immune system  integument  limbs/digits/tail 
     liver/biliary system  mortality/aging  nervous system  no phenotypic analysis  renal/urinary system 

    F2RL1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Class A/1 (Rhodopsin-like receptors)
    Class A/1 (Rhodopsin-like receptors)1.00
    GPCRs, Class A Rhodopsin-like0.41
    GPCR ligand binding0.75
    Neuroactive ligand-receptor interaction0.38
    Peptide ligand-binding receptors0.61
    2Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    3G alpha (q) signalling events
    G alpha (q) signalling events1.00
    Gastrin-CREB signalling pathway via PKC and MAPK0.90
    4Cytoskeletal Signaling
    Cytoskeletal Signaling1.00
    5Angiogenesis
    Angiogenesis1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for F2RL1
        Neuropeptides signaling through G-protein alpha-i & G-protein alpha-q

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for F2RL1
        p70S6K Signaling

    2 Cell Signaling Technology (CST) Pathways for F2RL1
        Angiogenesis
    Cytoskeletal Signaling

    1 BioSystems Pathway for F2RL1 
        GPCRs, Class A Rhodopsin-like

    5/8        Reactome Pathways for F2RL1 (see all 8)
        GPCR downstream signaling
    Peptide ligand-binding receptors
    Gastrin-CREB signalling pathway via PKC and MAPK
    Signaling by GPCR
    GPCR ligand binding


    2         Kegg Pathways  (Kegg details for F2RL1):
        Neuroactive ligand-receptor interaction
    African trypanosomiasis


    F2RL1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for F2RL1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/144 Interacting proteins for F2RL1 (P550851, 3 ENSP000002966774) via UniProtKB, MINT, STRING, and/or I2D (see all 144)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    COPS5Q929051, 3, ENSP000003505124EBI-4303189,EBI-594661 I2D: score=1 STRING: ENSP00000350512
    CBLP226811, 3, ENSP000002640334EBI-4303189,EBI-518228 I2D: score=1 STRING: ENSP00000264033
    GPRASP1Q5JY773, ENSP000003551464I2D: score=2 STRING: ENSP00000355146
    CAPN1P073843, ENSP000002792474I2D: score=1 STRING: ENSP00000279247
    F2P007343, ENSP000003085414I2D: score=1 STRING: ENSP00000308541
    About this table

    Gene Ontology (GO): 5/49 biological process terms (GO ID links to tree view) (see all 49):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002286T cell activation involved in immune response ISS--
    GO:0002690positive regulation of leukocyte chemotaxis IDA17991872
    GO:0002741positive regulation of cytokine secretion involved in immune response IDA11441110
    GO:0003104positive regulation of glomerular filtration ISS--
    GO:0006954inflammatory response IEA--


    F2RL1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    F2RL1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for F2RL1 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    SLIGKV-NH2PAR2 receptor agonist[190383-13-2]
    2-Furoyl-LIGRLO-amidePotent and selective PAR2 agonist[729589-58-6]
    AC 55541Potent and selective PAR2 agonist[916170-19-9]
    RWJ 56110Selective PAR1 antagonist[252889-88-6]
    SLIGRL-NH2PAR2-activating peptide[171436-38-7]
    10/79 Novoseek chemical compound relationships for F2RL1 gene (see all 79)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    apc-366 79 2 9020112 (1)
    serine 70.3 93 12759451 (3), 17304351 (2), 11356985 (2), 11441110 (2) (see all 65)
    calcium 51.1 85 12630574 (3), 20056842 (3), 12595338 (2), 10408902 (2) (see all 55)
    pd 98,059 50.6 5 17982475 (1), 18031579 (1), 15655297 (1), 16467309 (1) (see all 5)
    trypsinogen 50 2 17699557 (1), 14583448 (1)
    butaprost 49.4 3 18981149 (1), 17028262 (1), 15539459 (1)
    sbti 48 1 12415569 (1)
    vegf 47.6 33 16650817 (3), 16525644 (2), 15971170 (1), 16625496 (1) (see all 29)
    leupeptin 47.5 1 16303958 (1)
    benzamidine 42.3 1 16303958 (1)

    Search CenterWatch for drugs/clinical trials and news about F2RL1 / PAR2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for F2RL1 gene: 
    NM_005242.4  

    Unigene Cluster for F2RL1:

    Coagulation factor II (thrombin) receptor-like 1
    Hs.744181  [show with all ESTs]
    Unigene Representative Sequence: NM_005242
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000514165 ENST00000296677(uc003keo.3)

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    8/10 QIAGEN miScript miRNA Assays for microRNAs that regulate F2RL1 (see all 10):
    hsa-miR-142-5p hsa-miR-4324 hsa-miR-548e hsa-miR-548o hsa-miR-551b* hsa-miR-340 hsa-miR-4282 hsa-miR-3921
    SwitchGear 3'UTR luciferase reporter plasmidF2RL1 3' UTR sequence
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    Additional cDNA sequence: 

    AY336105.1 BC012453.1 BC018130.1 BT009856.1 U34038.1 U67058.1 

    2 DOTS entries:

    DT.213165  DT.100647861 

    5 AceView cDNA sequences:

    AI921544 AW272877 BE005953 AW578520 BE005956 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    F2RL1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TAAATACAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    F2RL1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    PlacentaChorioallantoic PlacentaExtraembryonic AngioblastsEndothelium
    KidneyRenal Collecting Duct SystemKidney
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 3 LifeMap Cells 
    NameCategory
    PureStem™ progenitor E44 (Embryonic Progenitor Cell)
    PureStem™ progenitor SM22 (Embryonic Progenitor Cell)
    Sox17-GFP genetically modified stem cells (Embryonic Stem Cell)Early Embryo, Inner Cell Mass

    See F2RL1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for F2RL1

    SOURCE GeneReport for Unigene cluster: Hs.744181

    UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085
    Tissue specificity: Widely expressed in tissues with especially high levels in pancreas, liver, kidney, small
    intestine, and colon. Moderate expression is detected in many organs, but none in brain or skeletal muscle

        SABiosciences Expression via Pathway-Focused PCR Arrays including F2RL1: 
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              Endothelial Cell Biology in human mouse rat
              Antifungal Response in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for F2RL1 gene from 4/11 species (see all 11)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia F2rl11 , 5 coagulation factor II (thrombin) receptor-like 11, 5 82.12(n)1
    83.63(a)1
      13 (49.53 cM)5
    140631  NM_007974.41  NP_032000.31 
     955117325 
    chicken
    (Gallus gallus)
    Aves F2RL11 coagulation factor II (thrombin) receptor-like 1 69.4(n)
    70.11(a)
      427213  NM_001012608.1  NP_001012626.1 
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.55072 Xenopus laevis transcribed sequence with weak similarity more 73.25(n)    BX850546.1 
    zebrafish
    (Danio rerio)
    Actinopterygii f2rl1.21 coagulation factor II (thrombin) receptor-like 1.2 58.43(n)
    55.06(a)
      100073342  NM_001098778.1  NP_001092248.1 


    ENSEMBL Gene Tree for F2RL1 (if available)
    TreeFam Gene Tree for F2RL1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for F2RL1 gene
    GPR42  FFAR32  GPR682  P2RY82  GPR652  FFAR22  F2RL22  GPR1322  
    FFAR12  GPR422  F2RL32  F2R2  
    18/22 SIMAP similar genes for F2RL1 using alignment to 2 protein entries:     PAR2_HUMAN (see all proteins) (see all similar genes):
    GPR18    C3AR1    F2RL2    GPR33    CCR7    F2R
    OPRK1    P2RY6    CCR5    F2RL3    GPR68    CYSLTR2
    KPG_011    LPAR4    P2RY8    SSTR5    GPR174    P2RY4

    F2RL1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/387 NCBI SNPs in F2RL1 are shown (see all 387    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 5 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs781796461,2
    C,F,--76112834(+) CCTACG/AAGAGA 1 -- us2k11Minor allele frequency- A:0.03WA 118
    rs6393421,2
    C,F,O,H,--76112869(+) TAGATG/ATAATA 1 -- us2k121Minor allele frequency- A:0.07NS MN EA NA 2576
    rs22429831,2
    C,F,H,--76112933(+) TAGGAA/GTCAGT 1 -- us2k18Minor allele frequency- G:0.01NS EA CSA WA 632
    rs1874508481,2
    --76113019(+) AGGTTA/CCTGTT 1 -- us2k10--------
    rs1423443211,2
    --76113039(+) GAAGTC/TAGCTT 1 -- us2k10--------
    rs22429841,2
    C,F,H,--76113080(+) GGTGAG/CAGCTG 1 -- us2k17Minor allele frequency- C:0.01NS EA WA 614
    rs1125279801,2
    C,--76113193(+) ATCCT-/CAGA  
            
    CAGAC
    1 -- us2k11Minor allele frequency- CAGA:0.50CSA 2
    rs1898585831,2
    --76113212(+) TAAACC/TTTTAA 1 -- us2k10--------
    rs2006861501,2
    --76113222(+) ACCAC-/GTGTGTG 1 -- us2k10--------
    rs31354721,2
    C--76113231(+) TGTGtG/Atatat 1 -- us2k12Minor allele frequency- A:0.02NS NA 48

    HapMap Linkage Disequilibrium report for F2RL1 (76114758 - 76131140 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for F2RL1: --
    Human Gene Mutation Database (HGMD): F2RL1

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    F2RL1 for disorders           About GeneDecksing

    OMIM gene information: 600933    OMIM disorders: --

    20/105 diseases for F2RL1 (see all 105):    About MalaCards
    growth hormone secreting pituitary adenoma    pancreatitis    graft versus host disease    inflammatory response, modulation of
    pulmonary vein stenosis    aids dementia complex    gastroesophageal reflux disease    neuroleptic malignant syndrome
    bile duct cancer    inflammatory bowel disease    irritable bowel syndrome    lupus erythematosus
    ovarian hyperstimulation syndrome    pituitary adenoma    insulin resistance    systemic lupus erythematosus
    cystic fibrosis    keratoconjunctivitis    allergic rhinitis    craniosynostosis

    3 diseases from the University of Copenhagen DISEASES database for F2RL1:
    Pancreatitis     Asthma     Irritable bowel syndrome

    10/76 Novoseek disease relationships for F2RL1 gene (see all 76)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    inflammation 63.6 96 15753914 (5), 11841560 (3), 15654951 (3), 11698614 (2) (see all 70)
    airways disease 48.3 4 14500256 (1), 15809358 (1), 11704532 (1), 16336275 (1)
    necrosis 43.2 51 8663011 (2), 12176089 (1), 13130473 (1), 17979070 (1) (see all 44)
    tumors 40.6 129 17761706 (5), 15250939 (4), 19795460 (4), 17203172 (3) (see all 79)
    asthma 35.9 20 11673222 (2), 11692107 (2), 15753914 (2), 12783571 (1) (see all 12)
    keratoconjunctivitis vernal 26 1 16303958 (1)
    hyperalgesia 23.3 14 15128844 (6), 16967049 (3), 15898281 (1), 18363639 (1) (see all 5)
    inflammatory bowel diseases 22 3 11804840 (1), 19184329 (1)
    apert syndrome 22 1 16373332 (1)
    osteoarthritis 21.1 6 17205215 (2), 17195212 (1), 17328048 (1), 18031579 (1)

    Human Genome Epidemiology (HuGE) Navigator: F2RL1 (5 documents)

    Export disorders for F2RL1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for F2RL1 gene, integrated from 9 sources (see all 684):
    (articles sorted by number of sources associating them with F2RL1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning and functional expression of the gene encoding the human proteinase-activated receptor 2. (PubMed id 7556175)1, 2, 3 Nystedt S....Sundelin J. (1995)
    2. Interactions of mast cell tryptase with thrombin receptors and PAR-2. (PubMed id 9020112)1, 2, 9 Molino M....Brass L.F. (1997)
    3. c-Cbl mediates ubiquitination, degradation, and down-regulation of human protease-activated receptor 2. (PubMed id 15708858)1, 2, 9 Jacob C....Bunnett N.W. (2005)
    4. Analysis of proteinase-activated receptor 2 and TLR4 signal transduction: a novel paradigm for receptor cooperativity. (PubMed id 18622013)1, 2, 9 Rallabhandi P....Vogel S.N. (2008)
    5. Interaction of mite allergens Der p3 and Der p9 with protease-activated receptor-2 expressed by lung epithelial cells. (PubMed id 11441110)1, 2, 9 Sun G....Mattoli S. (2001)
    6. Conserved structure and adjacent location of the thrombin receptor and protease-activated receptor 2 genes define a protease-activated receptor gene cluster. (PubMed id 8784787)1, 2, 9 Kahn M.L.... Coughlin S.R. (1996)
    7. Phosphorylation of protease-activated receptor-2 diff erentially regulates desensitization and internalization. (PubMed id 19815543)1, 2, 9 Ricks T.K. and Trejo J. (2009)
    8. Agonists of proteinase-activated receptor-2 modulate human neutrophil cytokine secretion, expression of cell adhesion molecules, and migration within 3-D collagen lattices. (PubMed id 15155775)1, 2, 9 Shpacovitch V.M....Steinhoff M. (2004)
    9. Proteinase-activated receptor-2 mediated inhibition o f TNFalpha-stimulated JNK activation - A novel paradigm for G(q/11) linked GPCR s. (PubMed id 19781631)1, 2, 9 McIntosh K....Plevin R. (2010)
    10. Protease-activated receptors-1 and -2 can mediate endothelial barrier protection: role in factor Xa signaling. (PubMed id 16359518)1, 2, 9 Feistritzer C....Riewald M. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2150 HGNC: 3538 AceView: F2RL1 Ensembl:ENSG00000164251 euGenes: HUgn2150
    ECgene: F2RL1 Kegg: 2150 H-InvDB: F2RL1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for F2RL1 Pharmacogenomics, SNPs, Pathways
    Wikipedia http://en.wikipedia.org/wiki/Protease-activated_receptor
    SeattleSNPshttp://pga.gs.washington.edu/data/f2rl1/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for F2RL1 gene:
    Search GeneIP for patents involving F2RL1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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