 |
 | Services
| |
 |
Aliases & Descriptions for F2RL1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| GPR11 2, 3, 5 | | PAR-2 3 | | PAR2 1, 2, 3, 5 |
| | | Descriptions |
|---|
| Coagulation factor II receptor-like 1 3 | | G protein-coupled receptor-11 2 | | G-protein coupled receptor 11 3 | | Thrombin receptor-like 1 3 | | coagulation factor II (thrombin) receptor-like 1 2 | | protease-activated receptor 2 2 | | proteinase-activated receptor-2 2 |
|
| | Search outside databases for aliases for F2RL1 genePrevious GC identifers: GC05P074920 GC05P076349 GC05P076153 GC05P076198 |
Summaries for F2RL1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for F2RL1: Coagulation factor II (thrombin) receptor-like 1 (F2RL1) is a member of the large family of 7-transmembrane-region receptors that couple to guanosine-nucleotide-binding proteins. F2RL1 is also a member of the protease-activated receptor family. It is activated by trypsin, but not by thrombin. It is activated by proteolytic cleavage of its extracellular amino terminus. The new amino terminus functions as a tethered ligand and activates the receptor. The F2RL1 gene contains two exons and is widely expressed in human tissues. The predicted protein sequence is 83% identical to the mouse receptor sequence. [provided by RefSeq] UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085Function: Receptor for trypsin and trypsin-like enzymes coupled to G proteins that stimulate phosphoinositide hydrolysis. May have a role in the regulation of vascular toneGene Wiki entry for F2RL1 |
Genomic Location for F2RL1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the F2RL1 gene 
Entrez Gene cytogenetic band: 5q13 Ensembl cytogenetic band: 5q13.3 HGNC cytogenetic band: 5q13F2RL1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05P076150:
(about GC identifiers)
Start:
|
76,150,610 bp from pter |
End:
|
76,166,896 bp from pter |
Size:
|
16,287 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000005.8 NT_006713.14
| Proteins for F2RL1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085 (See
protein sequence)Recommended Name: Proteinase-activated receptor 2 precursor Size: 397 amino acids; 44126 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: Q13317 Q13346Post-translational modifications:
A proteolytic cleavage generates a new N-terminus that functions as a tethered ligand1
REFSEQ proteins: NP_005233.3
ENSEMBL proteins: ENSP00000296677
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for F2RL1: Assays for F2RL1: | Protein
Domains/ Families for F2RL1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P55085
ProtoNet protein and cluster: P55085 2 Blocks protein families: IPB002281 Protease activated receptor 2 precursor signature IPB003912 Protease activated receptor precursor signature
UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for F2RL1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005242
Applied Biosystems Silencer® siRNAs for F2RL1
Sigma-Aldrich siRNA and siRNA Panels for F2RL1  Sigma-Aldrich shRNA Panels and shRNA for F2RL1  Explore Sigma-Aldrich super-pooled esiRNAs 
| Clones: |  | Invitrogen Clones for F2RL1 | |  | Millipore Clones for the Expression of F2RL1 |               OriGene GFP tagged cDNA clone in CMV expression vector: NM_005242                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005242                                  untagged cDNA clones in CMV expression vector (see all 2): NM_005242 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_005242
UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085Function: Receptor for trypsin and trypsin-like enzymes coupled to G proteins that stimulate phosphoinositide hydrolysis. May have a role in the regulation of vascular toneGenatlas biochemistry entry for F2RL1:coagulation factor II (thrombin) receptor proteinase-activated receptor 2,G protein coupled receptor superfamily11 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for F2rl1):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for F2RL1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for F2RL1 
5/23 Interacting proteins for F2RL1 (ENSP000002966773) via UniProtKB, MINT, and/or STRING (see all 23
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for F2RL1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for F2RL1 |
Compounds for F2RL1 available from Tocris Bioscience About this table
10/33 Novoseek chemical compound relationships for F2RL1 gene (see all 33
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| apc-366 |
73.92 |
2 |
9020112 (1) |
| butaprost |
51.28 |
3 |
18981149 (1), 17028262 (1), 15539459 (1) |
| calcium |
50.49 |
73 |
12630574 (3), 12595338 (2), 10408902 (2), 16195539 (2) (see all 49) |
| pd 98,059 |
49.95 |
5 |
17982475 (1), 18031579 (1), 15655297 (1), 16467309 (1) (see all 5) |
| sbti |
49.68 |
1 |
12415569 (1) |
| trypsinogen |
48.35 |
2 |
17699557 (1), 14583448 (1) |
| prostaglandin |
33.42 |
6 |
16091786 (2), 16691544 (1), 11250873 (1) |
| inositol 1,4,5 trisphosphate |
28.52 |
1 |
9238072 (1) |
| tyrosine |
28.05 |
12 |
17675298 (2), 18245671 (1), 15166220 (1), 16533697 (1) (see all 10) |
| allergens |
22.65 |
8 |
18305573 (3), 18626479 (2), 12370395 (1) |
About this table
|
Transcripts for F2RL1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005242
Sigma-Aldrich siRNA and siRNA Panels for F2RL1  Sigma-Aldrich shRNA Panels and shRNA for F2RL1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_005242 REFSEQ mRNAs for F2RL1 gene: NM_005242.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_005242               OriGene GFP tagged cDNA clone in CMV expression vector: NM_005242                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005242                                  untagged cDNA clones in CMV expression vector (see all 2): NM_005242  Additional cDNA sequence: AY336105.1 BC012453.1 BC018130.1 BT009856.1 U34038.1 U67058.1 2 DOTS entries: DT.213165 DT.100647861 5 AceView cDNA sequences:AI921544 BE005953 AW272877 BE005956 AW578520
highest scoring ESTs for F2RL1:U34038 U67058 AA232603 AA373375 AA480816 AI942392 AW362651 AW376169 AW578520 AW630645 Unigene Cluster for F2RL1: Coagulation factor II (thrombin) receptor-like 1 Hs.154299 [show with all ESTs]Unigene Representative Sequence: NM_005242
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000296677
|
Expression for F2RL1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| F2RL1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for F2RL1
1 / 2 / 3 7 probe-sets matching F2RL1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TAAATACAAA
SOURCE GeneReport for Unigene cluster: Hs.154299
Expression variation in blood from EXPOLDB for F2RL1 UniProtKB/Swiss-Prot: PAR2_HUMAN, P55085Tissue specificity: Widely expressed in tissues with especially high levels in pancreas, liver, kidney, small intestine, and colon. Moderate expression is detected in many organs, but none in brain or skeletal muscle |
Orthologs for F2RL1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for F2RL1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for F2RL1
ENSEMBL Gene Tree for F2RL1 | Paralogs for F2RL1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for F2RL1 gene
- P2RY82 GPR182 F2RL32 F2R2 F2RL22
|
SNPs/Variants for F2RL1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for F2RL1 (up to first 250kb)
|
Disorders & Mutations for F2RL1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 600933
10/75 Novoseek disease relationships for F2RL1 gene (see all 75
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| inflammation |
63.38 |
84 |
15753914 (5), 11841560 (3), 15654951 (3), 11698614 (2) (see all 61) |
| airways disease |
46.85 |
4 |
14500256 (1), 15809358 (1), 11704532 (1), 16336275 (1) |
| necrosis |
43.28 |
48 |
8663011 (2), 12176089 (1), 13130473 (1), 17979070 (1) (see all 41) |
| tumors |
38.67 |
104 |
17761706 (5), 15250939 (4), 17203172 (3), 17936340 (3) (see all 67) |
| asthma |
34.61 |
18 |
11673222 (2), 11692107 (2), 15753914 (2), 12783571 (1) (see all 10) |
| keratoconjunctivitis vernal |
28.51 |
1 |
16303958 (1) |
| apert syndrome |
24.18 |
1 |
16373332 (1) |
| inflammatory bowel diseases |
22.80 |
3 |
11804840 (1), 19184329 (1) |
| hyperalgesia |
22.11 |
14 |
15128844 (6), 16967049 (3), 15898281 (1), 18363639 (1) (see all 5) |
| pancreatic cancer |
20.89 |
22 |
16525644 (4), 12527925 (3), 15660373 (3), 12792776 (2) (see all 7) |
About this table
Human Genome Epidemiology Navigator: F2RL1 (1 document)
|
Medical News for F2RL1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for F2RL1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/495 PubMed articles for F2RL1 gene (see all 495
):- Molecular cloning and functional expression of the gene encoding the human proteinase-activated receptor 2. (PubMed id 7556175)2, 3, 4 Nystedt S....Sundelin J. (1995)
- Conserved structure and adjacent location of the thrombin receptor and protease-activated receptor 2 genes define a protease-activated receptor gene cluster. (PubMed id 8784787)1, 3, 4 Kahn M.L.... Coughlin S.R. (1996)
- Molecular cloning, expression and potential functions of the human proteinase-activated receptor-2. (PubMed id 8615752)1, 3, 4 Boehm S.K....Bunnett N.W. (1996)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Molecular cloning of a potential proteinase activated receptor. (PubMed id 7937743)2, 3 Nystedt S....Sundelin J. (1994)
- Rab5a and rab11a mediate agonist-induced trafficking of protease-activated receptor 2. (PubMed id 12540381)1, 3 Roosterman D....Bunnett N.W. (2003)
- Expression of proteinase-activated receptor-2 in the intervertebral disc. (PubMed id 19247167)1, 3 Iida R....Uchida A. (2009)
- Expression and proinflammatory role of proteinase-activated receptor 2 in rheumatoid synovium: ex vivo studies using a novel proteinase-activated receptor 2 antagonist. (PubMed id 17328048)1, 3 Kelso E.B....McInnes I.B. (2007)
- Expression of protease activated receptor-2 related to angiogenesis in tumor advancement of uterine endometrial cancers. (PubMed id 17203172)1, 3 Jahan I....Tamaya T. (2007)
- Interactions of mast cell tryptase with thrombin receptors and PAR-2. (PubMed id 9020112)1, 3 Molino M....Brass L.F. (1997)
|
Search for F2RL1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing F2RL1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing F2RL1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing F2RL1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| Wikipedia | http://en.wikipedia.org/wiki/Protease-activated_receptor | | SeattleSNPs | http://pga.gs.washington.edu/data/f2rl1/ |
|
| | | About This Section
| --
| Services for F2RL1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for F2RL1:

 | |
 | | | | |
|
 |  |  |
| | Recombinant Proteins (PAR2) | | Antibodies (PAR2) |
| | | Tocris compounds for F2RL1 |
|
 |
 | | | |
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|