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Aliases & Descriptions for F2R
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| Coagulation factor II receptor 2, 3 | | Thrombin receptor 2, 3 | | coagulation factor II (thrombin) receptor 2 | | protease-activated receptor 1 2 |
|
| | Search outside databases for aliases for F2R genePrevious GC identifers: GC05P074817 GC05P076246 GC05P076050 GC05P076095 |
Summaries for F2R(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for F2R: Coagulation factor II receptor is a 7-transmembrane receptor involved in the regulation of thrombotic response. Proteolytic cleavage leads to the activation of the receptor. F2R is a G-protein coupled receptor family member. [provided by RefSeq] UniProtKB/Swiss-Prot: PAR1_HUMAN, P25116Function: High affinity receptor for activated thrombin coupled to G proteins that stimulate phosphoinositide hydrolysis. May play a role in platelets activation and in vascular developmentGene Wiki entry for F2R (Coagulation_factor_II_receptor) |
Genomic Location for F2R
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the F2R gene 
Entrez Gene cytogenetic band: 5q13 Ensembl cytogenetic band: 5q13.3 HGNC cytogenetic band: 5q13F2R Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05P076047:
(about GC identifiers)
Start:
|
76,047,542 bp from pter |
End:
|
76,067,054 bp from pter |
Size:
|
19,513 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000005.8 NT_006713.14
| Proteins for F2R
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PAR1_HUMAN, P25116 (See
protein sequence)Recommended Name: Proteinase-activated receptor 1 precursor Size: 425 amino acids; 47441 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
PDB structures from and Proteopedia :1NRN (3D)
 1NRO (3D)
 1NRP (3D)
 1NRQ (3D)
 1NRR (3D)
 3BEF (3D)
 
Secondary accessions: Q96RF7 Q9BUN4Post-translational modifications:
A proteolytic cleavage generates a new N-terminus that functions as a tethered ligand1
Phosphorylated; probably mediating desensitization prior to the uncoupling and internalization of the receptor1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001983.2
ENSEMBL proteins: ENSP00000321326 ENSP00000379534
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for F2R: Assays for F2R: | Protein
Domains/ Families for F2R(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P25116
ProtoNet protein and cluster: P25116 2 Blocks protein families: IPB000935 Thrombin receptor signature IPB003912 Protease activated receptor precursor signature
UniProtKB/Swiss-Prot: PAR1_HUMAN, P25116Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for F2R
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001992
Applied Biosystems Silencer® siRNAs for F2R
Sigma-Aldrich siRNA and siRNA Panels for F2R  Sigma-Aldrich shRNA Panels and shRNA for F2R  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001992                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001992                                  untagged cDNA clones in CMV expression vector (see all 2): BC016059 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001992
UniProtKB/Swiss-Prot: PAR1_HUMAN, P25116Function: High affinity receptor for activated thrombin coupled to G proteins that stimulate phosphoinositide hydrolysis. May play a role in platelets activation and in vascular developmentGenatlas biochemistry entry for F2R:coagulation factor II (thrombin) receptor,proteinase activated receptor 1 (centromeric to the common proximal breakpoint and unlikely involved in 5q- syndrome), G protein coupled receptor superfamily12 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for F2r):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for F2R
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
4 Sigma-Aldrich "Your Favorite Gene" Pathways for F2R (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for F2R 
5/71 Interacting proteins for F2R (ENSP000003213263) via UniProtKB, MINT, and/or STRING (see all 71
)About this table
5/18 Gene Ontology (GO) biological process terms (links to tree view) (see all 18
): About this table
|
Drugs & Compounds for F2R(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for F2R |
Compounds for F2R available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| SCH 79797 dihydrochloride | Potent, selective non-peptide PAR1 antagonist | [245520-69-8] | | TFLLR-NH2 | PAR1-activating peptide | [197794-83-5] | | TRAP-6 | PAR1 peptide fragment (residues 42-47); acts as a PAR1 agonist | [141136-83-6] | About this table
10/46 Novoseek chemical compound relationships for F2R gene (see all 46
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| fllrn |
85.14 |
6 |
16427862 (2), 10917956 (1), 7834643 (1) |
| sfflrnp |
79.33 |
2 |
8074233 (1), 8074680 (1) |
| cangrelor |
75.94 |
2 |
18657683 (1), 18462654 (1), 18369175 (1), 18991794 (1) |
| prasugrel |
66.86 |
4 |
18462654 (1), 18369175 (1), 18991794 (1) |
| adp |
61.57 |
38 |
12871418 (3), 15078882 (3), 17675219 (2), 11722114 (2) (see all 24) |
| phosphoinositide |
59.66 |
22 |
10224146 (2), 1328213 (1), 18511035 (1), 1328861 (1) (see all 14) |
| fibrinogen |
58.26 |
37 |
10891092 (4), 10395938 (4), 11460501 (2), 17115723 (2) (see all 24) |
| calcium |
57.85 |
140 |
16939417 (6), 18788611 (3), 16800746 (3), 7516333 (2) (see all 90) |
| apotransferrin |
47.23 |
4 |
14769051 (3) |
| tyrosine |
46.96 |
47 |
16581796 (2), 7917785 (2), 15023990 (2), 15383630 (2) (see all 31) |
About this table
|
Transcripts for F2R(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001992
Sigma-Aldrich siRNA and siRNA Panels for F2R  Sigma-Aldrich shRNA Panels and shRNA for F2R  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001992 REFSEQ mRNAs for F2R gene: NM_001992.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001992               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001992                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001992                                  untagged cDNA clones in CMV expression vector (see all 2): BC016059  Additional cDNA sequence: AK297131.1 AK308169.1 AK314202.1 AY771596.1 BC002464.2 BC051909.1 BT007279.1 M62424.1 M93111.1 S76625.1 11 DOTS entries: DT.453981 DT.100786133 DT.120839242 DT.102828402 DT.120839109 DT.120839110 DT.120839127 DT.120839266 DT.121073993 DT.86843855 DT.87046583 24/117 AceView cDNA sequences (see all 117
):BG678898 N43757 AU142813 BQ001546 CA437630 CA424375 BM479604 BC051909 BU616929 BM994328 BP347223 CA434342 CA438126 AA450199 AI921649 BM756571 AU123806 BF438574 BT007279 AL045309 AI520885 BC016059 BC002464 BE747275
highest scoring ESTs for F2R:M62424 AA090540 AA193590 AA193631 AA301704 AA304353 AA304477 AA307567 AA346770 AA450199 Unigene Cluster for F2R: Coagulation factor II (thrombin) receptor Hs.482562 [show with all ESTs]Unigene Representative Sequence: NM_001992
GeneLoc Exon Structure
2 Alternative Splicing Database (ASD) splice patterns (SP) for F2R
| ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | |
| SP1: | |   | |   | |   | |   | |
| SP2: | |   | - |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for F2R
2 Ensembl transcripts including schematic representations: ENST00000319211
ENST00000396233
|
Expression for F2R
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| F2R expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for F2R
1 / 2 / 3 4 probe-sets matching F2R gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.482562
Expression variation in blood from EXPOLDB for F2R UniProtKB/Swiss-Prot: PAR1_HUMAN, P25116Tissue specificity: Platelets and vascular endothelial cells |
Orthologs for F2R
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for F2R gene from 5/8 species (see all 8
)
About this table Species with no ortholog for F2R
ENSEMBL Gene Tree for F2R | Paralogs for F2R(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for F2R gene
- P2RY82 GPR182 F2RL12 F2RL32 F2RL22
|
SNPs/Variants for F2R(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for F2R (up to first 250kb)
|
Disorders & Mutations for F2R
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 187930
10/94 Novoseek disease relationships for F2R gene (see all 94
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| thrombosis |
54.17 |
24 |
10669659 (2), 14529396 (2), 11408522 (2), 12538843 (2) (see all 14) |
| inflammation |
50.17 |
60 |
15545995 (3), 14597986 (3), 18570113 (3), 16116312 (2) (see all 33) |
| 5q- syndrome |
44.20 |
1 |
8602997 (1) |
| astrocytoma |
42.93 |
9 |
16231009 (2), 10664248 (2), 9359863 (1), 8930892 (1) (see all 5) |
| arterial thrombosis |
39.65 |
6 |
7796507 (3), 11727307 (1), 9432025 (1) |
| restenosis |
34.73 |
22 |
9186620 (2), 14529396 (2), 18000795 (2), 8328214 (1) (see all 14) |
| necrosis |
34.20 |
52 |
9435232 (1), 12975637 (1), 15289504 (1), 15897419 (1) (see all 43) |
| bernard-soulier syndrome |
31.33 |
1 |
8110787 (1) |
| tumors |
30.33 |
131 |
11278329 (4), 16608645 (4), 11395381 (3), 16707447 (2) (see all 87) |
| atherosclerotic plaque |
29.82 |
3 |
14529396 (1), 12556215 (1), 18606675 (1) |
About this table
Human Gene Mutation Database: F2R Human Genome Epidemiology Navigator: F2R (26 documents)
|
Medical News for F2R(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for F2R (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/802 PubMed articles for F2R gene (see all 802
):- Protease-activated receptors 1 and 4 mediate activation of human platelets by thrombin. (PubMed id 10079109)1, 3, 4 Kahn M.L....Coughlin S.R. (1999)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Characterization of single-nucleotide polymorphisms in coding regions of human genes. (PubMed id 10391209)3, 4 Cargill M....Lander E.S. (1999)
- Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of expected and novel binding modes. (PubMed id 8136362)3, 4 Mathews I.I.... Fenton J.W. II (1994)
- Chromosomal assignment of the human thrombin receptor gene: localization to region q13 of chromosome 5. (PubMed id 8395910)2, 3 Bahou W.F....Demetrick D.J. (1993)
- Molecular cloning of a functional thrombin receptor reveals a novel proteolytic mechanism of receptor activation. (PubMed id 1672265)3, 4 Vu T.-K.H.... Coughlin S.R. (1991)
- Protease-activated receptor-1 in human brain: localization and functional expression in astrocytes. (PubMed id 15191806)1, 3 Junge C.E....Traynelis S.F. (2004)
- Proteinase-activated receptor-1 (PAR(1)) and PAR(2) but not PAR(4) mediate contraction in human and guinea-pig gallbladders. (PubMed id 18179608)1, 3 Lee M.C. and Huang S.C. (2008)
- Lipid raft localization regulates the cleavage specificity of protease activated receptor 1 in endothelial cells. (PubMed id 18284602)1, 3 Bae J.S....Rezaie A.R. (2008)
- Thrombin receptors and protease-activated receptor-2 in human placentation: receptor activation mediates extravillous trophoblast invasion in vitro. (PubMed id 14507634)1, 3 O'Brien P.J....Christenson L.K. (2003)
|
Search for F2R
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing F2R
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing F2R
(According to HUGE)
About This Section
| -- |
Specialized Databases showing F2R(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for F2R(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for F2R:

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| | | | Tocris compounds for F2R |
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Incremental update: 13 Oct 2009
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