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Aliases for F11-AS1 Gene

Subcategory (RNA class) for F11-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for F11-AS1 Gene

  • F11 Antisense RNA 1 2 3

External Ids for F11-AS1 Gene

ORGUL Members for F11-AS1 Gene

Summaries for F11-AS1 Gene

GeneCards Summary for F11-AS1 Gene

F11-AS1 (F11 Antisense RNA 1) is a RNA Gene, and belongs to lncRNA RNA class.

fRNAdb sequence ontologies for F11-AS1 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for F11-AS1 Gene

Genomics for F11-AS1 Gene

Genomic Location for F11-AS1 Gene

Start:
186,286,094 bp from pter
End:
186,501,058 bp from pter
Size:
214,965 bases
Orientation:
Minus strand

Genomic View for F11-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for F11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for F11-AS1 Gene

No data available for Regulatory Elements for F11-AS1 Gene

Proteins for F11-AS1 Gene

Post-translational modifications for F11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for F11-AS1 Gene

Domains for F11-AS1 Gene

Gene Families for F11-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with F11-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for F11-AS1 Gene

Function for F11-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for F11-AS1 Gene

Localization for F11-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for F11-AS1 Gene

Pathways for F11-AS1 Gene

SuperPathways for F11-AS1 Gene

No Data Available

Interacting Proteins for F11-AS1 Gene

Gene Ontology (GO) - Biological Process for F11-AS1 Gene

None

No data available for Pathways by source for F11-AS1 Gene

Transcripts for F11-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for F11-AS1 Gene

No ASD Table

Relevant External Links for F11-AS1 Gene

GeneLoc Exon Structure for
F11-AS1
ECgene alternative splicing isoforms for
F11-AS1

Expression for F11-AS1 Gene

mRNA expression in normal human tissues for F11-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for F11-AS1 Gene

This gene is overexpressed in Liver (37.0), Testis (5.9), and Pancreas (5.2).
genes like me logo Genes that share expressions with F11-AS1: view

Orthologs for F11-AS1 Gene

Evolution for F11-AS1 Gene

ENSEMBL:
Gene Tree for F11-AS1 (if available)
TreeFam:
Gene Tree for F11-AS1 (if available)

No data available for Orthologs for F11-AS1 Gene

Paralogs for F11-AS1 Gene

No data available for Paralogs for F11-AS1 Gene

Variants for F11-AS1 Gene

Sequence variations from dbSNP and Humsavar for F11-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs713223 -- 186,491,109(-) AGAAC(A/G)CAGGG intron-variant
rs713224 -- 186,491,213(+) CCCTC(C/G)TCTCT intron-variant
rs722128 -- 186,413,639(+) CTGGG(C/G)TCTAT intron-variant
rs737703 -- 186,365,596(-) AGAAA(C/T)TTGAT intron-variant
rs737704 -- 186,365,568(-) TCCTT(C/T)CTGCT intron-variant

Relevant External Links for F11-AS1 Gene

HapMap Linkage Disequilibrium report
F11-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for F11-AS1 Gene

Disorders for F11-AS1 Gene

No disorders were found for F11-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for F11-AS1 Gene

Publications for F11-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber M.J. … Krauss R.M. (PLoS ONE 2010) 3
  4. Genetic associations for activated partial thromboplastin time and prothrombin time, their gene expression profiles, and risk of coronary artery disease. (PMID: 22703881) Tang W. … Folsom A.R. (Am. J. Hum. Genet. 2012) 3
  5. Genome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D. (PMID: 22760553) Adkins D.E. … van den Oord E.J. (Transl Psychiatry 2012) 3

Products for F11-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate F11-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for F11-AS1
    • Block miRNA regulation of F11-AS1 using miScript Target Protectors

    Sources for F11-AS1 Gene

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