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Aliases for F11-AS1 Gene

Subcategory (RNA class) for F11-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for F11-AS1 Gene

  • F11 Antisense RNA 1 2 3 5

External Ids for F11-AS1 Gene

Previous GeneCards Identifiers for F11-AS1 Gene

  • GC04M187209

Summaries for F11-AS1 Gene

GeneCards Summary for F11-AS1 Gene

F11-AS1 (F11 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for F11-AS1 Gene

Genomics for F11-AS1 Gene

Regulatory Elements for F11-AS1 Gene

Promoters for F11-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around F11-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for F11-AS1 Gene

Chromosome:
4
Start:
186,286,094 bp from pter
End:
186,501,058 bp from pter
Size:
214,965 bases
Orientation:
Minus strand

Genomic View for F11-AS1 Gene

Genes around F11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
F11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for F11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for F11-AS1 Gene

Proteins for F11-AS1 Gene

Post-translational modifications for F11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for F11-AS1 Gene

Domains & Families for F11-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for F11-AS1 Gene

Function for F11-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for F11-AS1 Gene

Localization for F11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for F11-AS1 Gene

Pathways & Interactions for F11-AS1 Gene

SuperPathways for F11-AS1 Gene

No Data Available

Interacting Proteins for F11-AS1 Gene

Gene Ontology (GO) - Biological Process for F11-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for F11-AS1 Gene

Drugs & Compounds for F11-AS1 Gene

No Compound Related Data Available

Transcripts for F11-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for F11-AS1 Gene

No ASD Table

Relevant External Links for F11-AS1 Gene

GeneLoc Exon Structure for
F11-AS1
ECgene alternative splicing isoforms for
F11-AS1

Expression for F11-AS1 Gene

mRNA expression in normal human tissues for F11-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for F11-AS1 Gene

This gene is overexpressed in Liver (x37.0), Testis (x5.9), and Pancreas (x5.2).
genes like me logo Genes that share expression patterns with F11-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for F11-AS1 Gene

Orthologs for F11-AS1 Gene

Evolution for F11-AS1 Gene

ENSEMBL:
Gene Tree for F11-AS1 (if available)
TreeFam:
Gene Tree for F11-AS1 (if available)

No data available for Orthologs for F11-AS1 Gene

Paralogs for F11-AS1 Gene

No data available for Paralogs for F11-AS1 Gene

Variants for F11-AS1 Gene

Sequence variations from dbSNP and Humsavar for F11-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs921453 -- 186,490,648(-) CAGAT(A/G)AACGA intron-variant
rs713223 -- 186,491,109(-) AGAAC(A/G)CAGGG intron-variant
rs713224 -- 186,491,213(+) CCCTC(C/G)TCTCT intron-variant
rs998667 -- 186,394,669(-) CTCAG(A/G)ATGGG intron-variant
rs722128 -- 186,413,639(+) CTGGG(C/G)TCTAT intron-variant

Relevant External Links for F11-AS1 Gene

HapMap Linkage Disequilibrium report
F11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for F11-AS1 Gene

Disorders for F11-AS1 Gene

Relevant External Links for F11-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
F11-AS1

No disorders were found for F11-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for F11-AS1 Gene

Publications for F11-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 67
  2. Genetic associations for activated partial thromboplastin time and prothrombin time, their gene expression profiles, and risk of coronary artery disease. (PMID: 22703881) Tang W. … Folsom A.R. (Am. J. Hum. Genet. 2012) 3
  3. Genome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D. (PMID: 22760553) Adkins D.E. … van den Oord E.J. (Transl Psychiatry 2012) 3
  4. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber M.J. … Krauss R.M. (PLoS ONE 2010) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for F11-AS1 Gene

Sources for F11-AS1 Gene

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