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Aliases for F10-AS1 Gene

Subcategory (RNA class) for F10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for F10-AS1 Gene

  • F10 Antisense RNA 1 2 3 5
  • F10 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for F10-AS1 Gene

Previous GeneCards Identifiers for F10-AS1 Gene

  • GC00U933424
  • GC13M113783

Summaries for F10-AS1 Gene

GeneCards Summary for F10-AS1 Gene

F10-AS1 (F10 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for F10-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for F10-AS1 Gene

Genomics for F10-AS1 Gene

GeneHancer (GH) Regulatory Elements for F10-AS1 Gene

Promoters and enhancers for F10-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I113130 Enhancer 0.3 Ensembl 550.8 -0.2 -155 0.4 ZBTB33 F10-AS1 KARSP2 F10 GC13M113076
GH13I113151 Enhancer 1.4 FANTOM5 Ensembl ENCODE 11 -23.5 -23486 3.6 MLX ARNT ZFP64 ARID4B DMAP1 ZNF48 YY1 GLIS2 ZNF202 SP5 PROZ LOC102724474 PCID2 TUBGCP3 KARSP2 F10-AS1 F10 DCUN1D2-AS CUL4A ATP11A
GH13I113182 Enhancer 1.4 Ensembl ENCODE dbSUPER 11 -56.2 -56195 6.5 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 SLC30A9 FOS PROZ CUL4A PCID2 F10-AS1 KARSP2 F10 GRTP1 F7 LAMP1 ENSG00000269356
GH13I113021 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.4 +107.1 107087 2.5 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 FOS RXRA MCF2L MCF2L-AS1 F7 PROZ F10 F10-AS1 KARSP2 ENSG00000269376 PIR52168
GH13I113175 Enhancer 1 Ensembl ENCODE dbSUPER 11.2 -48.4 -48426 5.7 USF1 JUN ZIC2 JUND ZFHX2 POLR2A FOS EGR2 CHD2 PROZ PCID2 CUL4A KARSP2 F10-AS1 F10 F7 GRTP1 GRTP1-AS1 ENSG00000269356
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around F10-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for F10-AS1 Gene

Genomic Locations for F10-AS1 Gene
chr13:113,128,155-113,130,046
(GRCh38/hg38)
Size:
1,892 bases
Orientation:
Minus strand
chr13:113,782,469-113,783,194
(GRCh37/hg19)

Genomic View for F10-AS1 Gene

Genes around F10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
F10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for F10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for F10-AS1 Gene

Proteins for F10-AS1 Gene

Post-translational modifications for F10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for F10-AS1 Gene

Domains & Families for F10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for F10-AS1 Gene

Function for F10-AS1 Gene

Phenotypes From GWAS Catalog for F10-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for F10-AS1 Gene

Localization for F10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for F10-AS1 Gene

Pathways & Interactions for F10-AS1 Gene

SuperPathways for F10-AS1 Gene

No Data Available

Interacting Proteins for F10-AS1 Gene

Gene Ontology (GO) - Biological Process for F10-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for F10-AS1 Gene

Drugs & Compounds for F10-AS1 Gene

No Compound Related Data Available

Transcripts for F10-AS1 Gene

mRNA/cDNA for F10-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for F10-AS1 Gene

No ASD Table

Relevant External Links for F10-AS1 Gene

GeneLoc Exon Structure for
F10-AS1
ECgene alternative splicing isoforms for
F10-AS1

Expression for F10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for F10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for F10-AS1 Gene

This gene is overexpressed in Testis (x8.1) and Liver (x6.6).
genes like me logo Genes that share expression patterns with F10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for F10-AS1 Gene

Orthologs for F10-AS1 Gene

Evolution for F10-AS1 Gene

ENSEMBL:
Gene Tree for F10-AS1 (if available)
TreeFam:
Gene Tree for F10-AS1 (if available)

No data available for Orthologs for F10-AS1 Gene

Paralogs for F10-AS1 Gene

No data available for Paralogs for F10-AS1 Gene

Variants for F10-AS1 Gene

Sequence variations from dbSNP and Humsavar for F10-AS1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs5961 likely-benign, Factor X deficiency 113,129,471(-) G/C intron_variant
rs1000174970 -- 113,130,380(-) GGGG/GGGGG upstream_transcript_variant
rs1000905329 -- 113,128,515(-) C/T intron_variant
rs1000935800 -- 113,128,100(-) A/G downstream_transcript_variant
rs1001577545 -- 113,129,157(-) G/A intron_variant

Additional Variant Information for F10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
F10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for F10-AS1 Gene

Disorders for F10-AS1 Gene

Additional Disease Information for F10-AS1

No disorders were found for F10-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for F10-AS1 Gene

Publications for F10-AS1 Gene

No publications were found for F10-AS1 Gene.

Products for F10-AS1 Gene

Sources for F10-AS1 Gene

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