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Aliases for EXTL3-AS1 Gene

Subcategory (RNA class) for EXTL3-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for EXTL3-AS1 Gene

  • EXTL3 Antisense RNA 1 2 3
  • EXTL3 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 8 Open Reading Frame 50 2
  • C8orf50 3

External Ids for EXTL3-AS1 Gene

Previous Symbols for EXTL3-AS1 Gene

  • C8orf50

Summaries for EXTL3-AS1 Gene

GeneCards Summary for EXTL3-AS1 Gene

EXTL3-AS1 (EXTL3 Antisense RNA 1) is an RNA Gene, and belongs to the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EXTL3-AS1 Gene

Genomics for EXTL3-AS1 Gene

Genomic Location for EXTL3-AS1 Gene

Start:
28,696,198 bp from pter
End:
28,701,464 bp from pter
Size:
5,267 bases
Orientation:
Minus strand

Genomic View for EXTL3-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for EXTL3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EXTL3-AS1 Gene

No data available for Regulatory Elements for EXTL3-AS1 Gene

Proteins for EXTL3-AS1 Gene

Post-translational modifications for EXTL3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EXTL3-AS1 Gene

Domains for EXTL3-AS1 Gene

Gene Families for EXTL3-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with EXTL3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EXTL3-AS1 Gene

Function for EXTL3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for EXTL3-AS1 Gene

Localization for EXTL3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for EXTL3-AS1 Gene

Pathways for EXTL3-AS1 Gene

SuperPathways for EXTL3-AS1 Gene

No Data Available

Interacting Proteins for EXTL3-AS1 Gene

Gene Ontology (GO) - Biological Process for EXTL3-AS1 Gene

None

No data available for Pathways by source for EXTL3-AS1 Gene

Transcripts for EXTL3-AS1 Gene

mRNA/cDNA for EXTL3-AS1 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for EXTL3-AS1 Gene

No ASD Table

Relevant External Links for EXTL3-AS1 Gene

GeneLoc Exon Structure for
EXTL3-AS1
ECgene alternative splicing isoforms for
EXTL3-AS1

Expression for EXTL3-AS1 Gene

mRNA expression in normal human tissues for EXTL3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for EXTL3-AS1 Gene

This gene is overexpressed in Testis (5.0).
genes like me logo Genes that share expressions with EXTL3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for EXTL3-AS1 Gene

Orthologs for EXTL3-AS1 Gene

Evolution for EXTL3-AS1 Gene

ENSEMBL:
Gene Tree for EXTL3-AS1 (if available)
TreeFam:
Gene Tree for EXTL3-AS1 (if available)

No data available for Orthologs for EXTL3-AS1 Gene

Paralogs for EXTL3-AS1 Gene

No data available for Paralogs for EXTL3-AS1 Gene

Variants for EXTL3-AS1 Gene

Sequence variations from dbSNP and Humsavar for EXTL3-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs240939 -- 28,698,671(+) ggttg(A/C)aaccc intron-variant
rs33911551 -- 28,699,409(+) GAGAC(-/TG)AGACA intron-variant
rs34092499 -- 28,699,156(+) TGGGC(A/G)ACAGA intron-variant
rs34875801 -- 28,698,988(+) GACTC(C/T)GTCTC intron-variant
rs35955216 -- 28,699,404(+) TAGAG(G/T)AGACT intron-variant

Relevant External Links for EXTL3-AS1 Gene

HapMap Linkage Disequilibrium report
EXTL3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for EXTL3-AS1 Gene

Disorders for EXTL3-AS1 Gene

No disorders were found for EXTL3-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for EXTL3-AS1 Gene

Publications for EXTL3-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3

Products for EXTL3-AS1 Gene

Sources for EXTL3-AS1 Gene

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