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Aliases for EVI5L Gene

Aliases for EVI5L Gene

  • Ecotropic Viral Integration Site 5 Like 2 3 5
  • Ecotropic Viral Integration Site 5-Like Protein 4

External Ids for EVI5L Gene

Previous GeneCards Identifiers for EVI5L Gene

  • GC19P007817
  • GC19P007802
  • GC19P007895
  • GC19P007569

Summaries for EVI5L Gene

GeneCards Summary for EVI5L Gene

EVI5L (Ecotropic Viral Integration Site 5 Like) is a Protein Coding gene. GO annotations related to this gene include GTPase activator activity and Rab GTPase binding. An important paralog of this gene is EVI5.

UniProtKB/Swiss-Prot for EVI5L Gene

  • Functions as a GTPase-activating protein (GAP) with a broad specificity.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EVI5L Gene

Genomics for EVI5L Gene

Regulatory Elements for EVI5L Gene

Enhancers for EVI5L Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G007852 1.6 Ensembl ENCODE dbSUPER 11.9 +23.2 23231 1.3 PKNOX1 FOXA2 MLX AGO1 SIN3A ARID4B DMAP1 ZNF2 YY1 SLC30A9 PRR36 RNA5SP463 LRRC8E EVI5L ENSG00000268120
GH19G007860 1.6 Ensembl ENCODE dbSUPER 10.9 +32.2 32224 4.3 CREB3L1 AGO1 ARID4B SIN3A SLC30A9 ZNF143 FOS KLF13 ZNF263 SP3 XAB2 HNRNPM ZNF557 ELAVL1 ZNF558 CLEC4G ZNF414 EVI5L LRRC8E PRR36
GH19G007521 1.7 FANTOM5 ENCODE dbSUPER 10.1 -307.4 -307376 2.0 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 ZNF143 ZNF548 SP3 NFYC ELAVL1 HNRNPM ZNF414 XAB2 TIMM44 ZNF557 SNAPC2 EVI5L PEX11G MCOLN1
GH19G008388 1.7 Ensembl ENCODE dbSUPER 10 +562.6 562612 10.3 MLX CREB3L1 YY1 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 GLIS1 HNRNPM ZNF699 ZNF558 ELAVL1 XAB2 MARCH2 ZNF177 ZNF559 RAB11B-AS1 LOC100128428
GH19G007177 1.5 Ensembl ENCODE dbSUPER 10 -649.2 -649159 7.1 HDGF PKNOX1 SIN3A FEZF1 ZNF121 ZNF302 CBX5 ZNF143 ZNF207 ZNF202 ELAVL1 XAB2 ZNF557 ARHGEF18 EVI5L INSR GC19P007151 GC19P007214
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around EVI5L on UCSC Golden Path with GeneCards custom track

Promoters for EVI5L Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000106731 -133 1801 HDGF PKNOX1 FOXA2 CREB3L1 SIN3A ZBTB7B YY1 ZNF143 FOS KLF13

Genomic Location for EVI5L Gene

Chromosome:
19
Start:
7,830,233 bp from pter
End:
7,864,976 bp from pter
Size:
34,744 bases
Orientation:
Plus strand

Genomic View for EVI5L Gene

Genes around EVI5L on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EVI5L Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EVI5L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EVI5L Gene

Proteins for EVI5L Gene

  • Protein details for EVI5L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96CN4-EVI5L_HUMAN
    Recommended name:
    EVI5-like protein
    Protein Accession:
    Q96CN4
    Secondary Accessions:
    • B9A6I9

    Protein attributes for EVI5L Gene

    Size:
    794 amino acids
    Molecular mass:
    91376 Da
    Quaternary structure:
    • May interact with RAB10.

    Alternative splice isoforms for EVI5L Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for EVI5L Gene

Post-translational modifications for EVI5L Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for EVI5L Gene

No data available for DME Specific Peptides for EVI5L Gene

Domains & Families for EVI5L Gene

Suggested Antigen Peptide Sequences for EVI5L Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96CN4

UniProtKB/Swiss-Prot:

EVI5L_HUMAN :
  • The arginine and glutamine fingers are critical for the GTPase-activating mechanism, they pull out Rabs switch 2 glutamine and insert in Rabs active site.
Domain:
  • The arginine and glutamine fingers are critical for the GTPase-activating mechanism, they pull out Rabs switch 2 glutamine and insert in Rabs active site.
genes like me logo Genes that share domains with EVI5L: view

No data available for Gene Families for EVI5L Gene

Function for EVI5L Gene

Molecular function for EVI5L Gene

UniProtKB/Swiss-Prot Function:
Functions as a GTPase-activating protein (GAP) with a broad specificity.

Gene Ontology (GO) - Molecular Function for EVI5L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005096 GTPase activator activity IDA 17646400
GO:0005515 protein binding IPI 16189514
GO:0017137 Rab GTPase binding IPI 17646400
genes like me logo Genes that share ontologies with EVI5L: view
genes like me logo Genes that share phenotypes with EVI5L: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for EVI5L Gene

Localization for EVI5L Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for EVI5L gene
Compartment Confidence
nucleus 3
cytosol 3

Gene Ontology (GO) - Cellular Components for EVI5L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IBA --
GO:0012505 endomembrane system IBA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with EVI5L: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for EVI5L Gene

Pathways & Interactions for EVI5L Gene

SuperPathways for EVI5L Gene

No Data Available

Gene Ontology (GO) - Biological Process for EVI5L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006886 intracellular protein transport IBA --
GO:0031338 regulation of vesicle fusion IBA --
GO:0043547 positive regulation of GTPase activity IDA 17646400
GO:0090630 activation of GTPase activity IBA --
GO:1902018 negative regulation of cilium assembly IMP 17646400
genes like me logo Genes that share ontologies with EVI5L: view

No data available for Pathways by source and SIGNOR curated interactions for EVI5L Gene

Drugs & Compounds for EVI5L Gene

No Compound Related Data Available

Transcripts for EVI5L Gene

Unigene Clusters for EVI5L Gene

Ecotropic viral integration site 5-like:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for EVI5L Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11a · 11b · 11c ^ 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16 ^ 17 ^ 18 ^ 19
SP1: - - -
SP2: - -
SP3:

Relevant External Links for EVI5L Gene

GeneLoc Exon Structure for
EVI5L
ECgene alternative splicing isoforms for
EVI5L

Expression for EVI5L Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EVI5L Gene

Protein differential expression in normal tissues from HIPED for EVI5L Gene

This gene is overexpressed in Adrenal (45.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for EVI5L Gene



NURSA nuclear receptor signaling pathways regulating expression of EVI5L Gene:

EVI5L

SOURCE GeneReport for Unigene cluster for EVI5L Gene:

Hs.26870

Evidence on tissue expression from TISSUES for EVI5L Gene

  • Nervous system(4.4)
  • Liver(4.1)
genes like me logo Genes that share expression patterns with EVI5L: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for EVI5L Gene

Orthologs for EVI5L Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for EVI5L Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia EVI5L 34 35
  • 99.5 (n)
mouse
(Mus musculus)
Mammalia Evi5l 35
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia EVI5L 34 35
  • 93.71 (n)
cow
(Bos Taurus)
Mammalia EVI5L 34 35
  • 92.88 (n)
oppossum
(Monodelphis domestica)
Mammalia EVI5L 35
  • 91 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 21 (a)
ManyToMany
chicken
(Gallus gallus)
Aves EVI5L 35
  • 82 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia EVI5L 35
  • 91 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia evi5l 34
  • 69.81 (n)
zebrafish
(Danio rerio)
Actinopterygii si:ch211-239f4.1 34
  • 70.24 (n)
EVI5L 35
  • 60 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG11727 35
  • 42 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea eat-17 35
  • 35 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes GYP5 35
  • 17 (a)
ManyToMany
GYL1 35
  • 16 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.3125 35
  • 44 (a)
OneToMany
Species where no ortholog for EVI5L was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for EVI5L Gene

ENSEMBL:
Gene Tree for EVI5L (if available)
TreeFam:
Gene Tree for EVI5L (if available)

Paralogs for EVI5L Gene

Paralogs for EVI5L Gene

(1) SIMAP similar genes for EVI5L Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for EVI5L Gene

genes like me logo Genes that share paralogs with EVI5L: view

Variants for EVI5L Gene

Sequence variations from dbSNP and Humsavar for EVI5L Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000045849 -- 7,832,809(+) CCACG(G/T)GGAAC intron-variant
rs1000049662 -- 7,838,964(+) GCACT(A/C)CAGCC intron-variant
rs1000102939 -- 7,859,616(+) CCTTG(C/T)TCTGA intron-variant
rs1000124516 -- 7,838,832(+) GAGAA(A/G)TTTTC intron-variant
rs1000228951 -- 7,865,150(+) GGGCA(C/T)GATTT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for EVI5L Gene

Variant ID Type Subtype PubMed ID
dgv1704n106 CNV duplication 24896259
dgv1986e59 CNV duplication 20981092
nsv1060887 CNV gain 25217958
nsv1072317 CNV deletion 25765185
nsv1076462 CNV duplication 25765185
nsv1120354 CNV tandem duplication 24896259
nsv1142928 CNV tandem duplication 24896259
nsv1146932 CNV duplication 26484159
nsv525499 CNV loss 19592680
nsv833732 CNV gain 17160897
nsv833733 CNV gain 17160897

Variation tolerance for EVI5L Gene

Residual Variation Intolerance Score: 14% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.53; 11.57% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for EVI5L Gene

Human Gene Mutation Database (HGMD)
EVI5L
SNPedia medical, phenotypic, and genealogical associations of SNPs for
EVI5L

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for EVI5L Gene

Disorders for EVI5L Gene

Relevant External Links for EVI5L

Genetic Association Database (GAD)
EVI5L
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
EVI5L

No disorders were found for EVI5L Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EVI5L Gene

Publications for EVI5L Gene

  1. The Evi5 family in cellular physiology and pathology. (PMID: 23669355) Lim Y.S. … Tang B.L. (FEBS Lett. 2013) 2 3 64
  2. Host determinants of HIV-1 control in African Americans. (PMID: 20205591) Pelak K. … . (J. Infect. Dis. 2010) 3 46 64
  3. Identification and characterization of a novel Tre-2/Bub2/Cdc16 (TBC) protein that possesses Rab3A-GAP activity. (PMID: 19077034) Ishibashi K. … Fukuda M. (Genes Cells 2009) 3 4 64
  4. Screening for target Rabs of TBC (Tre-2/Bub2/Cdc16) domain-containing proteins based on their Rab-binding activity. (PMID: 16923123) Itoh T. … Fukuda M. (Genes Cells 2006) 3 4 64
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64

Products for EVI5L Gene

Sources for EVI5L Gene

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