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Aliases & Descriptions for EVI1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases AML1-EVI-1 2 EVI-1 2 , 3 MDS1-EVI1 1 , 2 MGC163392 2 PRDM3 1 , 2
Descriptions AML1-EVI-1 fusion protein 2 ecotropic viral integration site 1 2 oncogene EVI1 2
Search outside databases for aliases for EVI1 genePrevious GC identifers: GC03M166070 GC03M169855 GC03M170204 GC03M170123 GC03M170122
Summaries for EVI1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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Gene Wiki entry for EVI1
Genomic Location for EVI1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the EVI1 gene Entrez Gene cytogenetic band: 3q24-q28 Ensembl cytogenetic band: 3q26.2 HGNC cytogenetic band: 3q26 EVI1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure
GeneLoc location for GC03M170283:
(about GC identifiers )
Start:
170,283,981 bp from pter
End:
170,348,216 bp from pter
Size:
64,236 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000003.10 NT_005612.15 Proteins for EVI1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: EVI1_HUMAN, Q03112 (See
protein sequence )Recommended Name: Ecotropic virus integration site 1 protein homolog Size : 1051 amino acids; 118276 Da
Subunit : May interact with CTBP1 (By similarity)
Subcellular location : Nucleus
Secondary accessions : Q16122 Q99917Alternative splicing : 2 isoforms : Q03112-1 Q03112-2
Post-translational modifications:
Phosphorylated upon DNA damage, probably by ATM or ATR1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001098547.2 NP_001098548.2 NP_005232.2 ENSEMBL proteins: ENSP00000264674 ENSP00000376494 ENSP00000376493 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for EVI1: Assays for EVI1:
Protein
Domains/ Families for EVI1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q03112 ProtoNet protein and cluster: Q03112
1 Blocks protein family : IPB007086 C2H2-type zinc finger signature UniProtKB/Swiss-Prot: EVI1_HUMAN, Q03112 Similarity : Contains 10 C2H2-type zinc fingers
Gene Function for EVI1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
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Q-PCR Products
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_005241 Applied Biosystems Silencer ® siRNAs for EVI1 Sigma-Aldrich siRNA for EVI1 Sigma-Aldrich shRNA for EVI1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001105077                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001105077                                  untagged cDNA clones in CMV expression vector (see all 4 ): AF164155  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001105077 Genatlas biochemistry entry for EVI1 :murine ecotropic virus integration site-1,normally expressed in kidney and in developingoocyte,inappropriately activated by chromosomal rearrangement,leading to expression inhematopoietic cells and to myeloid leukemias
14 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Evi1) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for EVI1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for EVI1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for EVI1 5/33 Interacting proteins for EVI1 (Q03112 1 ENSP00000264674 3 ) via UniProtKB, MINT, and/or STRING (see all 33
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007275 multicellular organismal development
IEA -- GO:0008150 biological_process
ND --
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Drugs & Compounds for EVI1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for EVI1 1 Novoseek chemical compound relationship for EVI1 gene
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
zinc
34.78
3
10867128 (2), 8921366 (1)
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Transcripts for EVI1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_005241 Sigma-Aldrich siRNA for EVI1 Sigma-Aldrich shRNA for EVI1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001105077 NM_001105078 NM_005241
REFSEQ mRNAs for EVI1 gene (3 alternative transcripts): NM_001105077.2 NM_001105078.2 NM_005241.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001105077 NM_001105078 NM_005241
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001105077                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001105077                                  untagged cDNA clones in CMV expression vector (see all 4 ): AF164155  
Additional cDNA sequence: AF164154.1 AF164155.1 AF164156.1 AF164157.1 AF487422.1 AF487423.1 AF487424.1 AK025934.1 AK292865.1 AK304098.1 AK308404.1 AK310509.1 BC012450.1 BC031019.1 BC130520.1 BC143951.1 BC143952.1 BX640908.1 BX647613.1 X54989.1
15 DOTS entries : DT.97833454 DT.95188434 DT.112836 DT.97783385 DT.95365072 DT.120888100 DT.65286979 DT.120888089 DT.91692286 DT.95228866 DT.75173055 DT.97814361 DT.112839 DT.97767208 DT.75165091
24/120 AceView cDNA sequences (see all 120
):AA961157 AA236533 AL699361 AF487422 BC012450 AI079954 AW851143 BM984772 AI587511 AA335780 BM768941 AI808322 CB132738 BQ102518 BC031019 AA335418 AK025934 AA913663 BX482681 AA335020 AA132806 BU741968 BX280183 BX647613
highest scoring ESTs for EVI1 :AA044205 AF164155 AF164157 AF487424 AL699157 AL699287 AL699361 AL699457 BX470726 BX475994
Unigene Cluster for EVI1: Ecotropic viral integration site 1 Hs.719216 [show with all ESTs ] Unigene Representative Sequence: BX640908 GeneLoc Exon Structure 5/10 Alternative Splicing Database (ASD) splice patterns (SP) for EVI1 (see all 10
) ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9a · 9b · 9c ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ 16 ^ SP1 :             -     -   -                                   SP2 :                                               -       SP3 :                   -                                   SP4 :   -   -   -   -   -   -     -   -                                   SP5 :       -   -   -   -     -   -                                  
ExUns: 17 ^ 18 ^ 19 ^ 20 ^ 21 SP1 :           SP2 :           SP3 :           SP4 :           SP5 :          
About this scheme ECgene alternative splicing isoforms for EVI1 3 Ensembl transcripts including schematic representations : ENST00000264674
ENST00000392737
ENST00000392736
Expression for EVI1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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EVI1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for EVI1 1 / 2 / 3
11 probe-sets matching EVI1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.719216 Expression variation in blood from EXPOLDB for EVI1
Orthologs for EVI1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for EVI1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for EVI1 ENSEMBL Gene Tree for EVI1 Paralogs for EVI1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for EVI1 gene PRDM13 2 PRDM16 2
SNPs/Variants for EVI1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for EVI1 (up to first 250kb)
Disorders & Mutations for EVI1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 165215 UniProtKB/Swiss-Prot: EVI1_HUMAN, Q03112
A chromosomal aberration involving EVI1 is a cause of chronic myelogenous leukemia (CML).Translocation t(3;21)(q26;q22) with RUNX1/AML1
10/16 Novoseek disease relationships for EVI1 gene (see all 16
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
myeloid leukemia
70.70
6
8700545 (1), 17913523 (1), 10867128 (1), 12972028 (1) (see all 6 )
myelodysplastic syndromes
69.71
11
11243114 (2), 11721451 (2), 8700545 (1), 17409414 (1) (see all 6 )
leukemogenesis
66.19
2
12972028 (1), 16014322 (1)
blast crisis
60.98
3
18613965 (2), 7808006 (1)
hematopoietic malignancies
60.59
1
11069022 (1)
leukemia
58.47
19
9183665 (4), 7808006 (2), 10867128 (2), 16156860 (1) (see all 12 )
myeloid leukemia chronic
44.13
3
7808006 (2)
monosomy
37.90
1
12139729 (1)
chromosomal aberrations
34.79
4
8700545 (1), 18619962 (1), 14704036 (1), 17243162 (1)
minimal residual disease
33.77
2
11248334 (1), 17693194 (1)
About this table Genatlas disease: EVI1 myelodysplastic syndrome,related to therapy,acute myeloid or undifferentiated leukemia,blasticcrisis in CML with inversion inv3(q21;q26), translocationst(3;3)(q21;q26),t(3;12)(q26;p13),t(3;21)(q26;q22),der 3t(3;78) and others (see alsoMDS1,EAP,ETV6,GR6,AML1,RPN1,TCRBV@) Tumor Gene Database : EVI1
Medical News for EVI1 (Possibly Related Articles in
Doctor's Guide )
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Publications for EVI1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/85 PubMed articles for EVI1 gene (see all 85
): Unique expression of the human Evi-1 gene in an endometrial carcinoma cell line: sequence of cDNAs and structure of alternatively spliced transcripts. (PubMed id 2115646) 2, 3, 4 Morishita K....Ihle J.N. (1990) Structurally altered Evi-1 protein generated in the 3q21q26 syndrome. (PubMed id 8700545) 1, 3, 4 Ogawa S.... Hirai H. (1996) Intergenic splicing of MDS1 and EVI1 occurs in normal tissues as well as in myeloid leukemia and produces a new member of the PR domain family. (PubMed id 8643684) 2, 3 Fears S....Nucifora G. (1996) Generation of the AML1-EVI-1 fusion gene in the t(3;21)(q26;q22) causes blastic crisis in chronic myelocytic leukemia. (PubMed id 8313895) 3, 4 Mitani K.... Hirai H. (1994) EVI1 is expressed in megakaryocyte cell lineage and enforced expression of EVI1 in UT-7/GM cells induces megakaryocyte differentiation. (PubMed id 11922610) 1, 3 Shimizu S....Morishita K. (2002) Repression of bone morphogenetic protein and activin-inducible transcription by Evi-1. (PubMed id 15849193) 1, 3 Alliston T....Derynck R. (2005) High EVI1 expression predicts poor survival in acute myeloid leukemia: a study of 319 de novo AML patients. (PubMed id 12393383) 1, 3 Barjesteh van Waalwijk van Doorn-Khosrovani S....Delwel R. (2003) EVI1 promotes cell proliferation by interacting with BRG1 and blocking the repression of BRG1 on E2F1 activity. (PubMed id 14555651) 1, 3 Chi Y....Nucifora G. (2003) A novel interaction between the proto-oncogene Evi1 and histone methyltransferases, SUV39H1 and G9a. (PubMed id 18619962) 1, 3 Spensberger D. and Delwel R. (2008) Amplification and translocation of 3q26 with overexpression of EVI1 in Fanconi anemia-derived childhood acute myeloid leukemia with biallelic FANCD1/BRCA2 disruption. (PubMed id 17243162) 1, 3 Meyer S....Tonnies H. (2007)
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Genome Databases showing EVI1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing EVI1
(According to HUGE )
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--
Specialized Databases showing EVI1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for EVI1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for EVI1:
Antibodies & Assays for EVI1   (Evi-1)
Recombinant Proteins (EVI1 ) Antibodies (EVI1 )
Search Tocris compounds for EVI1
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009