ETV3 Gene
protein-coding GIFtS : 48
GCID: GC01 M157090
ets variant 3 (Previous names: ets variant gene 3, ETS family transcriptional repressor,... )
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Aliasesfor ETV3 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Ets Variant 3 1 2 METS2 3 PE-11 2 3 ETS Domain Transcriptional Repressor PE12 3 PE12 3 5 Ets Variant Gene 31 Ets Variant Gene 3, ETS Family Transcriptional Repressor1 2 BA110J1.41 Mitogenic Ets Transcriptional Suppressor2 3 ETS Translocation Variant 32
Export aliases for ETV3 gene to outside databases Previous GC identifers: GC01M154963 GC01M152859 GC01M153872 GC01M154311 GC01M153907 GC01M155357 GC01M128452
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Summariesfor ETV3 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: ETV3_HUMAN, P41162 Function : Transcriptional repressor that contribute to growth arrest during terminal macrophage differentiation byrepressing target genes involved in Ras-dependent proliferation. Represses MMP1 promoter activity
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Genomic Viewsfor ETV3 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000001.10 NC_018912.1 NT_004487.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the ETV3 gene promoter: AML1a STAT3 Other transcription factors Search SABiosciences Chromatin IP Primers for ETV3 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat ETV3
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1q21-q23 Ensembl cytogenetic band: 1q23.1 HGNC cytogenetic band: 1q21-q23 ETV3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01M157090: view genomic region
(about GC identifiers )
Start:
157,090,983 bp from pter
End:
157,108,383 bp from pter
Size:
17,401 bases
Orientation:
minus strand
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Proteinsfor ETV3 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: ETV3_HUMAN, P41162 (See
protein sequence )Recommended Name: ETS translocation variant 3 Size : 512 amino acids; 57001 Da
Subcellular location : Nucleus (Potential)
Sequence caution : Sequence=AAA60949.1; Type=Frameshift; Positions=174;
Secondary accessions : B4E3M7 Q8TAC8 Q9BX30Alternative splicing : 2 isoforms : P41162-1 P41162-2 Explore the universe of human proteins at neXtProt for ETV3: NX_P41162 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P41162 ETV3 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001138784.1 NP_005231.1 ENSEMBL proteins: ENSP00000357175 ENSP00000327316 Human Recombinant Protein Products: Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005634 nucleus
NAS -- GO:0017053 transcriptional repressor complex
IEA --
ETV3 for ontologies About GeneDecksing ETV3 Antibody Products: Assay Products for ETV3:
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Protein
Domains / Familiesfor ETV3 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
ETV3 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P41162 ProtoNet protein and cluster: P41162
UniProtKB/Swiss-Prot: ETV3_HUMAN, P41162 Similarity : Belongs to the ETS familySimilarity : Contains 1 ETS DNA-binding domain
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Functionfor ETV3 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: ETV3_HUMAN, P41162 Function : Transcriptional repressor that contribute to growth arrest during terminal macrophage differentiation byrepressing target genes involved in Ras-dependent proliferation. Represses MMP1 promoter activity
Genatlas biochemistry entry for ETV3 : ETS variant gene 3,expressed in numerous cell lines,divergent member of the winged helix-turn-helix superfamily Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ETV3 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ETV3 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): ETV3 (NM_001145312 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ETV3 Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat ETV3
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ETV3
Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0003674 molecular_function
ND -- GO:0003700 sequence-specific DNA binding transcription factor activity
IEA -- GO:0005515 protein binding
-- -- GO:0043565 sequence-specific DNA binding
IEA --
ETV3 for ontologies About GeneDecksing
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Pathways & Interactionsfor ETV3 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 DNA Methylation and Transcriptional Repression
1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for ETV3 Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for ETV3 STRING Interaction
Network Preview (showing 2 interactants - click image to see more details)2 Interacting proteins for ETV3 (P41162 3 ENSP00000357175 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table Gene Ontology (GO): 3 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000122 negative regulation of transcription from RNA polymerase II promoter
IEA -- GO:0006351 transcription, DNA-dependent
IEA -- GO:0008150 biological_process
ND --
ETV3 for ontologies About GeneDecksing
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Drugs & Compoundsfor ETV3 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for ETV3 Search CenterWatch for drugs/clinical trials and news about ETV3
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Transcriptsfor ETV3 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for ETV3 gene (2 alternative transcripts): NM_001145312.1 NM_005240.1 Unigene Cluster for ETV3:
Ets variant 3 Hs.105636 [show with all ESTs ] Unigene Representative Sequence: AK316274 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000368192 (uc001fqr.2 ) ENST00000326786 (uc001fqt.3 ) ENST00000460850 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ETV3 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ETV3 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): ETV3 (NM_001145312 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ETV3 Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat ETV3
Additional cDNA sequence: AF218540.1 AK304789.1 AK316274.1 BC022868.1 L16464.1
4 DOTS entries : DT.95332215 DT.404458
DT.430587 DT.95254527 24/30 AceView cDNA sequences (see all 30 ):
BC022868 BM695111 AI791558 AA947850 BX091144 AA948144 BM666885 AW059911 AF218540 AL601147 BU686728 AI793162 L16464 AV660485 BG942091 AA915991 AI733068 BF176184 AI733226 BF087762 NM_005240 M78749 AW893562 AW893558 GeneLoc Exon Structure
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Expression for ETV3 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section ETV3 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TTTGCAGTGA
About this image ETV3 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table Stem Cell Differentiation: 1 LifeMap Cell Name Category Definitive endoderm-like cells (A scalable, suspensi... )Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See ETV3 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for ETV3 SOURCE GeneReport for Unigene cluster: Hs.105636 SABiosciences Custom PCR Arrays for ETV3 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ETV3Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat ETV3 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ETV3 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ETV3 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ETV3
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Orthologsfor ETV3 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for ETV3 gene from 5/16 species (see all 16 ) About this table
ENSEMBL Gene Tree for ETV3 (if available)TreeFam Gene Tree for ETV3 (if available)
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Paralogsfor ETV3 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for ETV3 gene ELK4 2 ETV1 2 ERF 2 ETV5 2 ETV3L 2 ETS1 2 GABPA 2 ETS2 2 ERG 2 ELK1 2 FEV 2 ETV4 2 ETV2 2 ELK3 2 FLI1 2 3 SIMAP similar genes for ETV3 using alignment to 1 protein entry: ETV3_HUMAN :ELF5 ERF ETV3L
ETV3 for paralogs About GeneDecksing
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Genomic Variantsfor ETV3 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 1 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for ETV3 (157090983 - 157108383 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for ETV3: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing ETV3
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Disorders
/ Diseasesfor ETV3 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
ETV3 for disorders About GeneDecksing
OMIM gene information: 164873
OMIM disorders : --2 diseases for ETV3 : About MalaCards conduct disorder adhd 2 diseases from the University of Copenhagen DISEASES database for ETV3 :Heart disease Hypertension Export disorders for ETV3 gene to outside databases
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Publicationsfor ETV3 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for ETV3 gene, integrated from 9 sources (see all 14 ): (articles sorted by number of sources associating them with ETV3) Utopia : connect your pdf to the dynamic world of online information
PE-1, a novel ETS oncogene family member, localizes to chromosome 1q21-q23. (PubMed id 8020980) 1 , 2 , 3 Klemsz M.... Hoffman R. (1994) The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414) 1 , 2 Gregory S.G.... Bentley D.R. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) An induced Ets repressor complex regulates growth arrest during terminal macrophage differentiation. (PubMed id 12007404) 1 , 2 Klappacher G.W.... Glass C.K. (2002) Interactions of pathological hallmark proteins: tubul in polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PubMed id 21832049) 1 OlA!h J....OvA!di J. (2011) Lysine acetylation targets protein complexes and co-regulates major cellular functions. (PubMed id 19608861) 2 Choudhary C.... Mann M. (2009) Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. (PubMed id 19690332) 2 Mayya V.... Han D.K. (2009) Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study. (PubMed id 18951430) 1 Anney R.J....Gill M. (2008) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 1 Barbe L....Andersson-Svahn H. (2008) Differential repression of c-myc and cdc2 gene expression by ERF and PE-1/METS. (PubMed id 17525531) 1 Hester K.D....Glass C.K. (2007)
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External Searches for ETV3 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing ETV3 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing ETV3 gene
(According to HUGE )
About This Section --
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Specialized Databases showing ETV3 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for ETV3 gene: Search GeneIP for patents involving ETV3 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor ETV3 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for ETV3 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for ETV3 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ETV3 OriGene Protein Over-expression Lysate for ETV3 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for ETV3 Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ETV3 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ETV3 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for ETV3 OriGene Custom Protein Services for ETV3 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ETV3 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing ETV3 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat ETV3 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat ETV3 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ETV3 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ETV3
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ETV3 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ETV3
Search ThermoFisher Antibodies for ETV3
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat ETV3
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Aliases for ETV3
Databases for ETV3
Disorders / Diseases for ETV3
Domains / Families for ETV3
Drugs / Compounds for ETV3
Expression for ETV3
Function for ETV3
Genomic Views for ETV3
Intellectual Property for ETV3
Orthologs for ETV3
Paralogs for ETV3
Pathways / Interactions for ETV3
Products for ETV3
Proteins for ETV3
Publications for ETV3
Search Box for ETV3
Summaries for ETV3
Transcripts for ETV3
Variants for ETV3
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