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Aliases for ETS1 Gene

Aliases for ETS1 Gene

  • ETS Proto-Oncogene 1, Transcription Factor 2 3 5
  • Avian Erythroblastosis Virus E26 (V-Ets) Oncogene Homolog-1 2 3
  • V-Ets Avian Erythroblastosis Virus E26 Oncogene Homolog 1 2 3
  • EWSR2 3 4
  • P54 3 4
  • V-Ets Avian Erythroblastosis Virus E2 Oncogene Homolog 1 3
  • Protein C-Ets-1 3
  • Ets Protein 2
  • C-Ets-1 3
  • ETS-1 3

External Ids for ETS1 Gene

Previous HGNC Symbols for ETS1 Gene

  • EWSR2

Previous GeneCards Identifiers for ETS1 Gene

  • GC11M130331
  • GC11M129841
  • GC11M128362
  • GC11M127869
  • GC11M127866
  • GC11M127833
  • GC11M124277
  • GC11M128328

Summaries for ETS1 Gene

Entrez Gene Summary for ETS1 Gene

  • This gene encodes a member of the ETS family of transcription factors, which are defined by the presence of a conserved ETS DNA-binding domain that recognizes the core consensus DNA sequence GGAA/T in target genes. These proteins function either as transcriptional activators or repressors of numerous genes, and are involved in stem cell development, cell senescence and death, and tumorigenesis. Alternatively spliced transcript variants encoding different isoforms have been described for this gene.[provided by RefSeq, Jul 2011]

GeneCards Summary for ETS1 Gene

ETS1 (ETS Proto-Oncogene 1, Transcription Factor) is a Protein Coding gene. Diseases associated with ETS1 include Chromosome 3Q29 Deletion Syndrome and Jacobsen Syndrome. Among its related pathways are Immune response IL-23 signaling pathway and C-MYB transcription factor network. GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding and transcription factor binding. An important paralog of this gene is ETS2.

UniProtKB/Swiss-Prot for ETS1 Gene

  • Transcription factor. Directly controls the expression of cytokine and chemokine genes in a wide variety of different cellular contexts. May control the differentiation, survival and proliferation of lymphoid cells. May also regulate angiogenesis through regulation of expression of genes controlling endothelial cell migration and invasion.

Gene Wiki entry for ETS1 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ETS1 Gene

Genomics for ETS1 Gene

Regulatory Elements for ETS1 Gene

Enhancers for ETS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G128461 2 FANTOM5 Ensembl ENCODE dbSUPER 25.3 +93.2 93202 65.0 HDGF PKNOX1 FOXA2 WRNIP1 SIN3A DMAP1 FEZF1 YY1 CBX5 ZNF207 ETS1 LOC101929517 FLI1 GC11M128486 GC11M128453
GH11G128288 1.8 FANTOM5 Ensembl ENCODE dbSUPER 22.3 +289.6 289571 18.3 HDGF PKNOX1 WRNIP1 FEZF1 YY1 CBX5 ZNF143 ZNF207 FOS JUNB ETS1 FLI1 LOC101929517 SENCR GC11M128298 GC11P128293
GH11G128322 1.6 FANTOM5 Ensembl ENCODE dbSUPER 20.6 +260.5 260491 9.3 CTCF JUN HLF EP300 RAD21 NR2F2 ZNF316 GATA2 ATF3 POLR2A ETS1 LOC101929517 FLI1 GC11M128315 GC11P128371
GH11G128340 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.5 +245.2 245189 3.7 ELF3 NFIB KLF17 SIN3A ZBTB40 YY1 GATA2 FOS CREM JUNB ETS1 LOC101929517 FLI1 GC11M128315 GC11P128371
GH11G128620 1.8 FANTOM5 Ensembl ENCODE dbSUPER 13 -38.4 -38353 10.8 PKNOX1 FOXA2 SIN3A YY1 ZNF766 ZNF143 FOS DEK JUNB REST FLI1 ETS1 SENCR LOC101929517 LOC105369568 GC11P128667
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ETS1 on UCSC Golden Path with GeneCards custom track

Promoters for ETS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000046886 183 400 CBX8 POLR2A KLF9 CHD7 MAFK

Transcription factor binding sites by QIAGEN in the ETS1 gene promoter:

Genomic Location for ETS1 Gene

Chromosome:
11
Start:
128,458,761 bp from pter
End:
128,587,584 bp from pter
Size:
128,824 bases
Orientation:
Minus strand

Genomic View for ETS1 Gene

Genes around ETS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ETS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ETS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ETS1 Gene

Proteins for ETS1 Gene

  • Protein details for ETS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P14921-ETS1_HUMAN
    Recommended name:
    Protein C-ets-1
    Protein Accession:
    P14921
    Secondary Accessions:
    • A9UL17
    • F5GYX9
    • Q14278
    • Q16080
    • Q6N087
    • Q96AC5

    Protein attributes for ETS1 Gene

    Size:
    441 amino acids
    Molecular mass:
    50408 Da
    Quaternary structure:
    • Binds DNA as a homodimer; homodimerization is required for transcription activation. Interacts with MAF and MAFB. Interacts with PAX5; the interaction alters DNA-binding properties (By similarity). Interacts with DAXX. Interacts with UBE2I. Interacts with SP100; the interaction is direct and modulates ETS1 transcriptional activity.

    Three dimensional structures from OCA and Proteopedia for ETS1 Gene

    Alternative splice isoforms for ETS1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ETS1 Gene

Post-translational modifications for ETS1 Gene

  • Sumoylated on Lys-15 and Lys-227, preferentially with SUMO2; which inhibits transcriptional activity.
  • Ubiquitinated; which induces proteasomal degradation.
  • Ubiquitination at Lys2, isoforms=5, 4, 28, Lys50, isoforms=3, 5, 258, and isoforms=3, 4245
  • Modification sites at PhosphoSitePlus

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for ETS1 (Ets-1)
  • Abcam antibodies for ETS1

No data available for DME Specific Peptides for ETS1 Gene

Domains & Families for ETS1 Gene

Gene Families for ETS1 Gene

Graphical View of Domain Structure for InterPro Entry

P14921

UniProtKB/Swiss-Prot:

ETS1_HUMAN :
  • Belongs to the ETS family.
Family:
  • Belongs to the ETS family.
genes like me logo Genes that share domains with ETS1: view

Function for ETS1 Gene

Molecular function for ETS1 Gene

GENATLAS Biochemistry:
avian erythroblastosis virus E26 (v-ets) oncogene homolog 1
UniProtKB/Swiss-Prot Function:
Transcription factor. Directly controls the expression of cytokine and chemokine genes in a wide variety of different cellular contexts. May control the differentiation, survival and proliferation of lymphoid cells. May also regulate angiogenesis through regulation of expression of genes controlling endothelial cell migration and invasion.
UniProtKB/Swiss-Prot Induction:
Up-regulated by retinoic acid, VEGF, TNF-alpha/TNFA, lipopolysaccharide and in response to hypoxia (at protein level).

Gene Ontology (GO) - Molecular Function for ETS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding IDA 12119294
GO:0000982 transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding IDA 21711453
GO:0001077 transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding IC --
GO:0003677 DNA binding ISS --
GO:0003700 transcription factor activity, sequence-specific DNA binding IDA 11909962
genes like me logo Genes that share ontologies with ETS1: view
genes like me logo Genes that share phenotypes with ETS1: view

Animal Models for ETS1 Gene

MGI Knock Outs for ETS1:

Animal Model Products

miRNA for ETS1 Gene

miRTarBase miRNAs that target ETS1

Transcription Factor Targets for ETS1 Gene

Selected GeneGlobe predicted Target genes for ETS1
Targeted motifs for ETS1 Gene
HOMER Transcription Factor Regulatory Elements motif ETS1
  • Consensus sequence: ACAGGAAGTG Submotif: canonical Cell Type: Jurkat GEO ID: GSE17954

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for ETS1

No data available for Enzyme Numbers (IUBMB) and Human Phenotype Ontology for ETS1 Gene

Localization for ETS1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ETS1 Gene

Cytoplasm. Nucleus. Note=Delocalizes from nucleus to cytoplasm when coexpressed with isoform Ets-1 p27. {ECO:0000269 PubMed:19377509}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ETS1 gene
Compartment Confidence
nucleus 5
cytosol 3
plasma membrane 2
extracellular 2
cytoskeleton 1

Gene Ontology (GO) - Cellular Components for ETS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA 11909962
GO:0005654 nucleoplasm TAS --
GO:0005667 transcription factor complex IEA --
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with ETS1: view

Pathways & Interactions for ETS1 Gene

genes like me logo Genes that share pathways with ETS1: view

SIGNOR curated interactions for ETS1 Gene

Is activated by:
Is inactivated by:

Gene Ontology (GO) - Biological Process for ETS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001666 response to hypoxia IEA --
GO:0002376 immune system process IEA --
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0006357 regulation of transcription from RNA polymerase II promoter IEA --
genes like me logo Genes that share ontologies with ETS1: view

Drugs & Compounds for ETS1 Gene

(27) Drugs for ETS1 Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(12) Additional Compounds for ETS1 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with ETS1: view

Transcripts for ETS1 Gene

Unigene Clusters for ETS1 Gene

V-ets erythroblastosis virus E26 oncogene homolog 1 (avian):
Representative Sequences:

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for ETS1

Alternative Splicing Database (ASD) splice patterns (SP) for ETS1 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b
SP1: -
SP2: - - -
SP3:

Relevant External Links for ETS1 Gene

GeneLoc Exon Structure for
ETS1
ECgene alternative splicing isoforms for
ETS1

Expression for ETS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ETS1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for ETS1 Gene

This gene is overexpressed in Liver (37.8), Blymphocyte (13.6), and CD8 Tcells (9.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for ETS1 Gene



Protein tissue co-expression partners for ETS1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ETS1 Gene:

ETS1

SOURCE GeneReport for Unigene cluster for ETS1 Gene:

Hs.369438

mRNA Expression by UniProt/SwissProt for ETS1 Gene:

P14921-ETS1_HUMAN
Tissue specificity: Highly expressed within lymphoid cells. Isoforms c-ETS-1A and Ets-1 p27 are both detected in all fetal tissues tested, but vary with tissue type in adult tissues. None is detected in brain or kidney.

Evidence on tissue expression from TISSUES for ETS1 Gene

  • Lung(4.5)
  • Heart(2.9)
  • Lymph node(2.9)
  • Intestine(2.7)
  • Spleen(2.7)
  • Blood(2.5)
  • Bone marrow(2.3)
  • Kidney(2.3)
  • Liver(2.3)
  • Muscle(2.2)
  • Skin(2.2)
genes like me logo Genes that share expression patterns with ETS1: view

Primer Products

No data available for mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for ETS1 Gene

Orthologs for ETS1 Gene

This gene was present in the common ancestor of animals.

Orthologs for ETS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ETS1 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ETS1 34 35
  • 95.09 (n)
oppossum
(Monodelphis domestica)
Mammalia ETS1 35
  • 93 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ets1 34
  • 92.52 (n)
mouse
(Mus musculus)
Mammalia Ets1 34 16 35
  • 92.35 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia ETS1 35
  • 92 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ETS1 34 35
  • 91.99 (n)
chicken
(Gallus gallus)
Aves ETS1 34 35
  • 84.66 (n)
lizard
(Anolis carolinensis)
Reptilia ETS1 35
  • 90 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100170599 34
  • 77.7 (n)
Str.1672 34
African clawed frog
(Xenopus laevis)
Amphibia ets1a-A-prov 34
zebrafish
(Danio rerio)
Actinopterygii ets1 34
  • 74.06 (n)
ETS1 35
  • 37 (a)
OneToOne
idibd1116 34
fruit fly
(Drosophila melanogaster)
Insecta pnt 36 35
  • 57 (a)
Species where no ortholog for ETS1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ETS1 Gene

ENSEMBL:
Gene Tree for ETS1 (if available)
TreeFam:
Gene Tree for ETS1 (if available)

Paralogs for ETS1 Gene

Paralogs for ETS1 Gene

(4) SIMAP similar genes for ETS1 Gene using alignment to 4 proteins:

Pseudogenes.org Pseudogenes for ETS1 Gene

genes like me logo Genes that share paralogs with ETS1: view

Variants for ETS1 Gene

Sequence variations from dbSNP and Humsavar for ETS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs142279599 Uncertain significance 128,485,068(+) TACCA(C/T)AGCCT intron-variant, reference, missense
rs1000116887 -- 128,536,929(+) AAACA(A/G)TAGGG intron-variant
rs1000128482 -- 128,578,239(+) CAGAA(C/T)AAAGG intron-variant
rs1000144563 -- 128,533,956(+) TTTAT(A/G)CCAAA intron-variant
rs1000158303 -- 128,574,808(+) CAAAG(G/T)TTTTG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ETS1 Gene

Variant ID Type Subtype PubMed ID
esv1237588 CNV deletion 17803354
esv1757388 CNV insertion 17803354
esv25513 CNV loss 19812545
esv2745237 CNV deletion 23290073
esv2745238 CNV deletion 23290073
esv2745239 CNV deletion 23290073
esv274885 CNV gain+loss 21479260
esv275204 CNV gain+loss 21479260
esv275584 CNV loss 21479260
esv3305475 CNV mobile element insertion 20981092
esv3325680 CNV insertion 20981092
esv3579955 CNV loss 25503493
esv3579956 CNV loss 25503493
esv3628046 CNV loss 21293372
esv8500 OTHER inversion 19470904
nsv442246 CNV loss 18776908
nsv517012 CNV loss 19592680
nsv952758 CNV duplication 24416366

Variation tolerance for ETS1 Gene

Residual Variation Intolerance Score: 26% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.73; 15.47% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ETS1 Gene

Human Gene Mutation Database (HGMD)
ETS1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
ETS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ETS1 Gene

Disorders for ETS1 Gene

MalaCards: The human disease database

(9) MalaCards diseases for ETS1 Gene - From: DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
chromosome 3q29 deletion syndrome
  • 3q29 microdeletion syndrome
jacobsen syndrome
  • chromosome 11q deletion
estrogen-receptor negative breast cancer
chromosome 3q29 microdeletion syndrome
  • chromosome 3q29 deletion syndrome
bone ewing's sarcoma
  • bone ewing sarcoma
- elite association - COSMIC cancer census association via MalaCards
Search ETS1 in MalaCards View complete list of genes associated with diseases

Relevant External Links for ETS1

Genetic Association Database (GAD)
ETS1
Human Genome Epidemiology (HuGE) Navigator
ETS1
Tumor Gene Database (TGDB):
ETS1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ETS1
genes like me logo Genes that share disorders with ETS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ETS1 Gene

Publications for ETS1 Gene

  1. SP100 inhibits ETS1 activity in primary endothelial cells. (PMID: 15592518) Yordy J.S. … Watson D.K. (Oncogene 2005) 3 4 22 64
  2. Sp100 interacts with ETS-1 and stimulates its transcriptional activity. (PMID: 11909962) Wasylyk C. … Wasylyk B. (Mol. Cell. Biol. 2002) 3 4 22 64
  3. Modulation of ETS-1 transcriptional activity by huUBC9, a ubiquitin- conjugating enzyme. (PMID: 9333025) Hahn S.L. … Wasylyk B. (Oncogene 1997) 3 4 22 64
  4. Quantitative and qualitative variation of ETS-1 transcripts in hematologic malignancies. (PMID: 8231246) Collyn d'Hooghe M. … Kerckaert J.P. (Leukemia 1993) 3 4 22 64
  5. Meta-analysis identifies nine new loci associated with rheumatoid arthritis in the Japanese population. (PMID: 22446963) Okada Y. … Yamamoto K. (Nat. Genet. 2012) 3 46 64

Products for ETS1 Gene

  • Addgene plasmids for ETS1

Sources for ETS1 Gene

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