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Aliases for ERICH6 Gene

Aliases for ERICH6 Gene

  • Glutamate-Rich 6 2 3
  • Family With Sequence Similarity 194, Member A 2 3
  • Glutamate-Rich 6A 2 3
  • Protein FAM194A 3 4
  • C3orf44 3 4
  • FAM194A 3 4
  • Chromosome 3 Open Reading Frame 44 2
  • ERICH6A 3

External Ids for ERICH6 Gene

Previous HGNC Symbols for ERICH6 Gene

  • C3orf44
  • FAM194A

Previous GeneCards Identifiers for ERICH6 Gene

  • GC03M150379

Summaries for ERICH6 Gene

GeneCards Summary for ERICH6 Gene

ERICH6 (Glutamate-Rich 6) is a Protein Coding gene. An important paralog of this gene is ERICH6B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ERICH6 Gene

Genomics for ERICH6 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ERICH6 Gene

Chromosome:
3
Start:
150,659,882 bp from pter
End:
150,704,563 bp from pter
Size:
44,682 bases
Orientation:
Minus strand

Genomic View for ERICH6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ERICH6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ERICH6 Gene

No data available for Regulatory Elements for ERICH6 Gene

Proteins for ERICH6 Gene

  • Protein details for ERICH6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7L0X2-ERIP6_HUMAN
    Recommended name:
    Glutamate-rich protein 6
    Protein Accession:
    Q7L0X2
    Secondary Accessions:
    • Q8N9Y8
    • Q8NCQ6
    • Q8NCZ6

    Protein attributes for ERICH6 Gene

    Size:
    663 amino acids
    Molecular mass:
    75255 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ERICH6 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ERICH6 Gene

Proteomics data for ERICH6 Gene at MOPED

Post-translational modifications for ERICH6 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ERICH6 Gene

No data available for DME Specific Peptides for ERICH6 Gene

Domains & Families for ERICH6 Gene

Protein Domains for ERICH6 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ERICH6 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q7L0X2

UniProtKB/Swiss-Prot:

ERIP6_HUMAN :
  • Belongs to the ERICH6 family.
Family:
  • Belongs to the ERICH6 family.
genes like me logo Genes that share domains with ERICH6: view

No data available for Gene Families for ERICH6 Gene

Function for ERICH6 Gene

Phenotypes for ERICH6 Gene

GenomeRNAi human phenotypes for ERICH6:
genes like me logo Genes that share phenotypes with ERICH6: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ERICH6

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ERICH6 Gene

Localization for ERICH6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ERICH6 Gene

Pathways & Interactions for ERICH6 Gene

SuperPathways for ERICH6 Gene

No Data Available

Interacting Proteins for ERICH6 Gene

Gene Ontology (GO) - Biological Process for ERICH6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ERICH6 Gene

Drugs & Compounds for ERICH6 Gene

No Compound Related Data Available

Transcripts for ERICH6 Gene

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ERICH6

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ERICH6 Gene

No ASD Table

Relevant External Links for ERICH6 Gene

GeneLoc Exon Structure for
ERICH6
ECgene alternative splicing isoforms for
ERICH6

Expression for ERICH6 Gene

mRNA expression in normal human tissues for ERICH6 Gene

mRNA differential expression in normal tissues according to GTEx for ERICH6 Gene

This gene is overexpressed in Testis (x42.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ERICH6 Gene



genes like me logo Genes that share expression patterns with ERICH6: view

Protein tissue co-expression partners for ERICH6 Gene

- Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ERICH6 Gene

Orthologs for ERICH6 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ERICH6 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia FAM194A 35
  • 82.64 (n)
  • 76.03 (a)
FAM194A 36
  • 70 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM194A 35
  • 82.91 (n)
  • 75.55 (a)
FAM194A 36
  • 69 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam194a 35
  • 69.93 (n)
  • 59.63 (a)
Fam194a 16
Fam194a 36
  • 52 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia FAM194A 35
  • 98.64 (n)
  • 97.44 (a)
FAM194A 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam194a 35
  • 73.77 (n)
  • 64.78 (a)
oppossum
(Monodelphis domestica)
Mammalia FAM194A 36
  • 42 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM194A 36
  • 34 (a)
OneToOne
chicken
(Gallus gallus)
Aves FAM194A 35
  • 56.05 (n)
  • 47.05 (a)
FAM194A 36
  • 43 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM194A 36
  • 36 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fam194a 35
  • 52.16 (n)
  • 40.08 (a)
Species with no ortholog for ERICH6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ERICH6 Gene

ENSEMBL:
Gene Tree for ERICH6 (if available)
TreeFam:
Gene Tree for ERICH6 (if available)

Paralogs for ERICH6 Gene

Paralogs for ERICH6 Gene

genes like me logo Genes that share paralogs with ERICH6: view

Variants for ERICH6 Gene

Sequence variations from dbSNP and Humsavar for ERICH6 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs1403085 -- 150,666,325(-) GTTTT(C/G)TGTGT intron-variant
rs2116682 -- 150,687,183(+) ATACC(A/G)CTACA intron-variant
rs2116686 -- 150,696,347(+) TTTTA(C/G)AAGAA intron-variant
rs2272085 -- 150,668,220(+) CACTA(C/T)GTACA intron-variant
rs3765005 -- 150,659,887(-) ACTAA(C/G)AATGA utr-variant-3-prime, downstream-variant-500B

Variation tolerance for ERICH6 Gene

Residual Variation Intolerance Score: 90.07% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.73; 78.75% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ERICH6 Gene

HapMap Linkage Disequilibrium report
ERICH6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ERICH6 Gene

Disorders for ERICH6 Gene

Relevant External Links for ERICH6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ERICH6
genes like me logo Genes that share disorders with ERICH6: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ERICH6 Gene

Publications for ERICH6 Gene

  1. The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets. (PMID: 25277244) Katsogiannou M. … Rocchi P. (Mol. Cell Proteomics 2014) 67
  2. Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling. (PMID: 19240061) Trynka G. … Wijmenga C. (Gut 2009) 67
  3. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 67
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 67

Products for ERICH6 Gene

Sources for ERICH6 Gene

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