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Aliases for ERICH6 Gene

Aliases for ERICH6 Gene

  • Glutamate-Rich 6 2 3
  • Family With Sequence Similarity 194, Member A 2 3
  • Glutamate-Rich 6A 2 3
  • Protein FAM194A 3 4
  • C3orf44 3 4
  • FAM194A 3 4
  • Chromosome 3 Open Reading Frame 44 2
  • Glutamate-Rich Protein 6 3
  • ERICH6A 3

External Ids for ERICH6 Gene

Previous Symbols for ERICH6 Gene

  • C3orf44
  • FAM194A

Summaries for ERICH6 Gene

GeneCards Summary for ERICH6 Gene

ERICH6 (Glutamate-Rich 6) is a Protein Coding gene. An important paralog of this gene is ERICH6B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ERICH6 Gene

Genomics for ERICH6 Gene

Genomic Location for ERICH6 Gene

Start:
150,659,885 bp from pter
End:
150,703,990 bp from pter
Size:
44,106 bases
Orientation:
Minus strand

Genomic View for ERICH6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ERICH6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ERICH6 Gene

No data available for Regulatory Elements for ERICH6 Gene

Proteins for ERICH6 Gene

  • Protein details for ERICH6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7L0X2-ERIP6_HUMAN
    Recommended name:
    Glutamate-rich protein 6
    Protein Accession:
    Q7L0X2
    Secondary Accessions:
    • Q8N9Y8
    • Q8NCQ6
    • Q8NCZ6

    Protein attributes for ERICH6 Gene

    Size:
    663 amino acids
    Molecular mass:
    75255 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ERICH6 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ERICH6 Gene

Proteomics data for ERICH6 Gene at MOPED

Post-translational modifications for ERICH6 Gene

No Post-translational modifications

Other Protein References for ERICH6 Gene

No data available for DME Specific Peptides for ERICH6 Gene

Domains for ERICH6 Gene

Protein Domains for ERICH6 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

ERIP6_HUMAN
Family:
  • Belongs to the ERICH6 family.:
    • Q7L0X2
genes like me logo Genes that share domains with ERICH6: view

No data available for Gene Families for ERICH6 Gene

Function for ERICH6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ERICH6 Gene

Localization for ERICH6 Gene

No data available for Gene Ontology (GO) - Cellular Components for ERICH6 Gene

Pathways for ERICH6 Gene

SuperPathways for ERICH6 Gene

No Data Available

Interacting Proteins for ERICH6 Gene

Gene Ontology (GO) - Biological Process for ERICH6 Gene

None

No data available for Pathways by source for ERICH6 Gene

Transcripts for ERICH6 Gene

mRNA/cDNA for ERICH6 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ERICH6 Gene

No ASD Table

Relevant External Links for ERICH6 Gene

GeneLoc Exon Structure for
ERICH6
ECgene alternative splicing isoforms for
ERICH6

Expression for ERICH6 Gene

mRNA expression in normal human tissues for ERICH6 Gene

mRNA differential expression in normal tissues according to GTEx for ERICH6 Gene

This gene is overexpressed in Testis (42.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ERICH6 Gene

genes like me logo Genes that share expressions with ERICH6: view

Orthologs for ERICH6 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ERICH6 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM194A 36
  • 98.64 (n)
  • 97.44 (a)
FAM194A 37
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM194A 36
  • 82.64 (n)
  • 76.03 (a)
FAM194A 37
  • 70 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM194A 36
  • 82.91 (n)
  • 75.55 (a)
FAM194A 37
  • 69 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam194a 36
  • 69.93 (n)
  • 59.63 (a)
Fam194a 16
Fam194a 37
  • 52 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM194A 37
  • 42 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM194A 37
  • 34 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam194a 36
  • 73.77 (n)
  • 64.78 (a)
chicken
(Gallus gallus)
Aves FAM194A 36
  • 56.05 (n)
  • 47.05 (a)
FAM194A 37
  • 43 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM194A 37
  • 36 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fam194a 36
  • 52.16 (n)
  • 40.08 (a)
Species with no ortholog for ERICH6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ERICH6 Gene

ENSEMBL:
Gene Tree for ERICH6 (if available)
TreeFam:
Gene Tree for ERICH6 (if available)

Paralogs for ERICH6 Gene

Paralogs for ERICH6 Gene

genes like me logo Genes that share paralogs with ERICH6: view

Variants for ERICH6 Gene

Sequence variations from dbSNP and Humsavar for ERICH6 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs1403085 -- 150,666,325(-) GTTTT(C/G)TGTGT intron-variant
rs2116682 -- 150,687,183(+) ATACC(A/G)CTACA intron-variant
rs2116686 -- 150,696,347(+) TTTTA(C/G)AAGAA intron-variant
rs2272085 -- 150,668,220(+) CACTA(C/T)GTACA intron-variant
rs3765005 -- 150,659,887(-) ACTAA(C/G)AATGA splice-donor-variant, utr-variant-3-prime, downstream-variant-500B

Relevant External Links for ERICH6 Gene

HapMap Linkage Disequilibrium report
ERICH6

No data available for Structural Variations from Database of Genomic Variants (DGV) for ERICH6 Gene

Disorders for ERICH6 Gene

No disorders were found for ERICH6 Gene.

No data available for UniProtKB/Swiss-Prot for ERICH6 Gene

Publications for ERICH6 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling. (PMID: 19240061) Trynka G. … Wijmenga C. (Gut 2009) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ERICH6 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ERICH6
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ERICH6
    • Block miRNA regulation of ERICH6 using miScript Target Protectors

    Sources for ERICH6 Gene

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