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Aliases for ERICH5 Gene

Aliases for ERICH5 Gene

  • Glutamate-Rich 5 2 3
  • C8orf47 3 4
  • Chromosome 8 Open Reading Frame 47 2
  • Glutamate-Rich Protein 5 3

External Ids for ERICH5 Gene

Previous Symbols for ERICH5 Gene

  • C8orf47

Summaries for ERICH5 Gene

GeneCards Summary for ERICH5 Gene

ERICH5 (Glutamate-Rich 5) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ERICH5 Gene

Genomics for ERICH5 Gene

Genomic Location for ERICH5 Gene

Start:
98,064,311 bp from pter
End:
98,093,610 bp from pter
Size:
29,300 bases
Orientation:
Plus strand

Genomic View for ERICH5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ERICH5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ERICH5 Gene

No data available for Regulatory Elements for ERICH5 Gene

Proteins for ERICH5 Gene

  • Protein details for ERICH5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6P6B1-ERIC5_HUMAN
    Recommended name:
    Glutamate-rich protein 5
    Protein Accession:
    Q6P6B1
    Secondary Accessions:
    • G3V1K4
    • Q8N1L8

    Protein attributes for ERICH5 Gene

    Size:
    374 amino acids
    Molecular mass:
    39936 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ERICH5 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ERICH5 Gene

Proteomics data for ERICH5 Gene at MOPED

Post-translational modifications for ERICH5 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ERICH5 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ERICH5 Gene

Domains for ERICH5 Gene

Protein Domains for ERICH5 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ERICH5: view

No data available for Gene Families and UniProtKB/Swiss-Prot for ERICH5 Gene

Function for ERICH5 Gene

miRNA for ERICH5 Gene

miRTarBase miRNAs that target ERICH5

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ERICH5 Gene

Localization for ERICH5 Gene

No data available for Gene Ontology (GO) - Cellular Components for ERICH5 Gene

Pathways for ERICH5 Gene

SuperPathways for ERICH5 Gene

No Data Available

Interacting Proteins for ERICH5 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000315614%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000315614 for ERICH5 Gene via STRING

Symbol External ID(s) Details
UBC

Gene Ontology (GO) - Biological Process for ERICH5 Gene

None

No data available for Pathways by source for ERICH5 Gene

Transcripts for ERICH5 Gene

mRNA/cDNA for ERICH5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ERICH5 Gene

No ASD Table

Relevant External Links for ERICH5 Gene

GeneLoc Exon Structure for
ERICH5
ECgene alternative splicing isoforms for
ERICH5

Expression for ERICH5 Gene

mRNA expression in normal human tissues for ERICH5 Gene

mRNA differential expression in normal tissues according to GTEx for ERICH5 Gene

This gene is overexpressed in Pancreas (13.3) and Liver (4.4).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ERICH5 Gene

genes like me logo Genes that share expressions with ERICH5: view

Orthologs for ERICH5 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ERICH5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C8H8orf47 36
  • 99.47 (n)
  • 98.93 (a)
C8orf47 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C14H8orf47 37
  • 53 (a)
OneToOne
ERICH5 36
  • 76.79 (n)
  • 64.62 (a)
dog
(Canis familiaris)
Mammalia C8orf47 37
  • 62 (a)
OneToOne
ERICH5 36
  • 80.23 (n)
  • 64.12 (a)
mouse
(Mus musculus)
Mammalia BC030476 36
  • 71.85 (n)
  • 53.67 (a)
BC030476 16
BC030476 37
  • 52 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C8orf47 37
  • 33 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC681820 36
  • 71.12 (n)
  • 52.37 (a)
Species with no ortholog for ERICH5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ERICH5 Gene

ENSEMBL:
Gene Tree for ERICH5 (if available)
TreeFam:
Gene Tree for ERICH5 (if available)

Paralogs for ERICH5 Gene

No data available for Paralogs for ERICH5 Gene

Variants for ERICH5 Gene

Sequence variations from dbSNP and Humsavar for ERICH5 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs768419 -- 98,090,229(-) TGTTT(C/T)GGAAA intron-variant
rs768420 -- 98,090,175(-) AGGCA(C/T)AGAAG intron-variant
rs1001908 -- 98,067,910(+) ATACT(A/G)TATAT intron-variant
rs1038004 -- 98,065,909(-) AGCGG(A/C)TGAGC intron-variant
rs1809171 -- 98,079,832(-) GCCGG(A/G)CACGG intron-variant

Relevant External Links for ERICH5 Gene

HapMap Linkage Disequilibrium report
ERICH5

No data available for Structural Variations from Database of Genomic Variants (DGV) for ERICH5 Gene

Disorders for ERICH5 Gene

No disorders were found for ERICH5 Gene.

No data available for UniProtKB/Swiss-Prot for ERICH5 Gene

Publications for ERICH5 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Common variants at 5q22 associate with pediatric eosinophilic esophagitis. (PMID: 20208534) Rothenberg M.E. … Hakonarson H. (Nat. Genet. 2010) 3
  4. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for ERICH5 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ERICH5
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ERICH5
    • Block miRNA regulation of ERICH5 using miScript Target Protectors

    Sources for ERICH5 Gene

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