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ERBB3 Gene

protein-coding   GIFtS: 76

GC12P054760
v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)
(Previous name: lethal congenital contracture syndrome 2 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: LCCS2)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
EC 2.7.10.1 3
ErbB-3 2
HER3 1, 2, 3
LCCS2 2, 5
MDA-BF-1 2
MGC88033 2
c-erbB-3 2
c-erbB3 2, 3
erbB-3 2
erbB3-S 2
p180-ErbB3 2
p45-sErbB3 2
p85-sErbB3 2
Descriptions
Tyrosine kinase-type cell surface receptor HER3 3
lethal congenital contracture syndrome 2 1
v-erb-b2 avian erythroblastic leukemia viral oncogene
homolog 3 2
v-erb-b2 erythroblastic leukemia viral oncogene homolog 3
(avian) 2
External Ids
HGNC: 34311
Entrez Gene: 20652
UniProtKB: P218603
Ensembl: ENSG000000653617
Search outside databases for aliases for ERBB3 gene

Previous GC identifers: GC12M056386 GC12M056841 GC12P056190

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for ERBB3:
This gene encodes a member of the epidermal growth factor receptor (EGFR) family of receptor
tyrosine kinases. This membrane-bound protein has a neuregulin binding domain but not an active
kinase domain. It therefore can bind this ligand but not convey the signal into the cell through
protein phosphorylation. However, it does form heterodimers with other EGF receptor family members
which do have kinase activity. Heterodimerization leads to the activation of pathways which lead
to cell proliferation or differentiation. Amplification of this gene and/or overexpression of its
protein have been reported in numerous cancers, including prostate, bladder, and breast tumors.
Alternate transcriptional splice variants encoding different isoforms have been characterized. One
isoform lacks the intermembrane region and is secreted outside the cell. This form acts to
modulate the activity of the membrane-bound form. Additional splice variants have also been
reported, but they have not been thoroughly characterized. [provided by RefSeq]

UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860
Function: Binds and is activated by neuregulins and NTAK

Gene Wiki entry for ERBB3

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ERBB3 gene  

Entrez Gene cytogenetic band: 12q13   Ensembl cytogenetic band:  12q13.2   HGNC cytogenetic band: 12q13

ERBB3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12P054760:     (about GC identifiers)

Start:
54,760,159 bp from pter
End:
54,783,395 bp from pter
Size:
23,237 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000012.10  NT_029419.11  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860 (See protein sequence)
Recommended Name: Receptor tyrosine-protein kinase erbB-3 precursor  
Size: 1342 amino acids; 148098 Da
Subunit: Heterodimer with each of the other ERBB receptors (Potential). Interacts with CSPG5, PA2G4
and MUC1
Subcellular location: Isoform 1: Cell membrane; Single-pass type I membrane protein
Subcellular location: Isoform 2: Secreted
PDB structures from and Proteopedia :
1M6B (3D)    
Alternative splicing: 2 isoforms:  P21860-1   P21860-2   

Post-translational modifications:

  • Ligand-binding increases phosphorylation on tyrosine residues and promotes its association with the
    p85 subunit of phosphatidylinositol 3-kinase (By similarity)1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_001005915.1  NP_001973.2  


    ENSEMBL proteins: 
    ENSP00000377659 ENSP00000267101 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Millipore Purified and/or Recombinant ERBB3 Protein
    Sigma-Aldrich CompoZr ZFN for ERBB3  
    R&D Systems Recombinant & Natural Proteins for ERBB3 (ErbB3/HER3)
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (ErbB 3)
    Human Recombinant Proteins from Abnova (ERBB3)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    5/8 Gene Ontology (GO) cellular component terms (links to tree view) (see all 8 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576 extracellular region IEA--
    GO:0005615 extracellular space IDA11389077
    GO:0005886 plasma membrane IEA--
    GO:0005887 integral to plasma membrane TAS2687875
    GO:0016323 basolateral plasma membrane IDA12646923
    About this table

    Antibodies for ERBB3: 
    Browse Antibodies Central at Invitrogen
    Millipore Mono- and Polyclonal Antibodies for the study of ERBB3
    Sigma-Aldrich Antibody Arrays and Antibodies for ERBB3
    R&D Systems Antibodies for ERBB3 (ErbB3/HER3)
    Cell Signaling Technology (CST) Antibodies for ERBB3  (HER3/ErbB3)
    Antibodies from Abcam (ErbB 3), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (ERBB3)
    Novus Biologicals Antibodies for ERBB3

    Assays for ERBB3: 
    Browse Invitrogen for biochemical assays
    Millipore Kits and Assays for the Analysis of ERBB3
    R&D Systems ELISAs for ERBB3 (ErbB3/HER3)         (see all)
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/8 InterPro domains/families (see all 8 ):
     IPR017441 Protein_kinase_ATP_BS
     IPR006212 Furin_repeat
     IPR000494 EGF_rcpt_L
     IPR001245 Tyr_pkinase
     IPR016245 Tyr_kinase_rcpt_EGF/ERB/XmrK


       GeneDecks  ERBB3 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P21860

    ProtoNet protein and cluster: P21860

    4 Blocks protein families:
    IPB000494 Epidermal growth-factor receptor (EGFR)
    IPB006211 Furin-like cysteine rich region
    IPB006212 Furin-like repeat
    IPB008266 Tyrosine protein kinase


    UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860
    Domain: The cytoplasmic part of the receptor may interact with the SH2 or SH3 domains of many
    signal-transducing proteins
    Similarity: Belongs to the protein kinase superfamily. Tyr protein kinase family. EGF receptor
    subfamily
    Similarity: Contains 1 protein kinase domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ERBB3)
    Millipore RNAi Products for the Analysis of ERBB3 Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (ERBB3)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001005915

                  Applied Biosystems Silencer® siRNAs for ERBB3

                  Sigma-Aldrich siRNA and siRNA Panels for ERBB3  
                         Sigma-Aldrich shRNA Panels and shRNA for ERBB3  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for ERBB3
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001005915
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001005915
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001005915 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_001982

    UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860
    Function: Binds and is activated by neuregulins and NTAK
    Catalytic activity: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate
    Enzyme Number (IUBMB): EC 2.7.10.1 

    Genatlas biochemistry entry for ERBB3:
    avian erythroblastic leukemia,viral (v-erb-b) oncogene homolog 3,heregulin beta 1 receptor,signal
    transducer receptor,heterodimerizing with the ligand less recetpor ERBB2

    15/16 MGI mutant phenotypes (inferred from 7 alleles(MGI details for Erbb3) (see all 16 ):

    behavior/neurologicaldigestive/alimentaryembryogenesisendocrine/exocrine gland
    growth/sizehomeostasis/metabolismlethality-postnatallethality-prenatal/perinatalmuscle
    nervous systemnormalpigmentationreproductive systemrespiratory system

    5/9 Gene Ontology (GO) molecular function terms (links to tree view) (see all 9 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0004714 transmembrane receptor protein tyrosine kinase activity IEA--
    GO:0004888 transmembrane receptor activity ISS7514177
    GO:0005524 ATP binding IEA--
    GO:0016740 transferase activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    1 Invitrogen iPath™ Online BioAtlas - Pathway for ERBB3 (Maps provided by GeneGo):
     ERBB-family signaling

       GeneDecks  ERBB3 for the pathways selected above  
    About GeneDecksing

    3 Millipore Pathways for ERBB3
     Apoptosis and survival Role of CDK5 in neuronal death and survival
     Development ERBB-family signaling
     Development Ligand-independent activation of ESR1 and ESR2

       GeneDecks  ERBB3 for the pathways selected above  
    About GeneDecksing

    2 Sigma-Aldrich "Your Favorite Gene" Pathways for  ERBB3  (Your Favorite Gene powered by Ingenuity) 
     Agrin Interactions at Neuromuscular Junction
     Neuregulin Signaling

       GeneDecks  ERBB3 for the pathways selected above  
    About GeneDecksing

    2 Cell Signaling Technology (CST) Pathways for ERBB3: 
     Translational Control: Regulation of eIF4E and p70 S6 Kinase
     Protein Acetylation

       GeneDecks  ERBB3 for the pathways selected above  
    About GeneDecksing

    2 Kegg Pathways  (Kegg details for ERBB3):
     hsa04012 ErbB signaling pathway
     hsa04020 Calcium signaling pathway

       GeneDecks  ERBB3 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  ERBB3 


    5/101 Interacting proteins for ERBB3 (P218601, 2 ENSP000002671013) via UniProtKB, MINT, and/or STRING (see all 101 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PIK3R2O004592, ENSP000002222543MINT-74627 MINT-74618 MINT-61512 MINT-74629 MINT-74637 MINT-61520 MINT-74625 MINT-74638 MINT-61513 MINT-74624 MINT-74636 MINT-74633 MINT-74628 MINT-61519 MINT-74626 MINT-74639 MINT-61516 MINT-74635 MINT-74634 MINT-61517 STRING (score=.823)
    SHC1P293532, ENSP000003574323MINT-74725 MINT-61521 MINT-74726 MINT-74738 STRING (score=.988)
    GRB7Q144512, ENSP000003107713MINT-74546 MINT-74548 MINT-74545 MINT-74547 STRING (score=.92)
    PLCG1P191742, ENSP000003623693MINT-74675 MINT-74682 MINT-74681 MINT-74676 STRING (score=.84)
    GRB2P629932, ENSP000003390073MINT-61515 MINT-61518 STRING (score=.984)
    About this table

    5/12 Gene Ontology (GO) biological process terms (links to tree view) (see all 12 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006468 protein amino acid phosphorylation IEA--
    GO:0007162 negative regulation of cell adhesion IDA7556068
    GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEA--
    GO:0007507 heart development IEA--
    GO:0009968 negative regulation of signal transduction IDA11389077
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Enzo Life Sciences drugs & compounds for ERBB3
    Sigma-Aldrich Small Molecules for ERBB3:
    Inhibitor

    Compounds for ERBB3 available from Tocris Bioscience
    CompoundAction CAS number
    HDS 029Potent inhibitor of the ErbB receptor family
    JNJ 28871063 hydrochloridePotent ErbB receptor family inhibitor[944341-54-2]
    PD 158780Potent ErbB receptor family inhibitor[171179-06-9]
    About this table


    10/23 Novoseek chemical compound relationships for ERBB3 gene (see all 23 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    tyrosine 83.12 224 7514177 (4), 7929151 (4), 8058768 (4), 11189010 (3) (see all 99)
    hrgbeta1 82.20 3 12209601 (2)
    pertuzumab 77.63 8 17627612 (3), 18632642 (2), 17547474 (1)
    phosphatidylinositol 64.73 45 7929151 (5), 7535767 (4), 9886492 (2), 8732665 (2) (see all 22)
    phosphotyrosine 55.35 7 8579117 (1), 12853564 (1), 10226586 (1), 8631031 (1) (see all 5)
    o-tyrosine 49.70 1 17983482 (1)
    phosphoinositide 46.71 15 11546794 (4), 8550620 (2), 16127743 (1), 11114724 (1) (see all 9)
    wortmannin 45.18 1 9389501 (1)
    apigenin 8.79 1 14602723 (1)
    progesterone 3.86 4 11758715 (1), 8579117 (1), 18024331 (1), 15534105 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ERBB3)
    Millipore RNAi Products for the Analysis of ERBB3 Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (ERBB3)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001005915

                  Sigma-Aldrich siRNA and siRNA Panels for ERBB3  
                         Sigma-Aldrich shRNA Panels and shRNA for ERBB3  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001005915  NM_001982  

    REFSEQ mRNAs for ERBB3 gene (2 alternative transcripts): 

    NM_001005915.1   NM_001982.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001005915  NM_001982  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001005915
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001005915
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001005915 

    Additional cDNA sequence: 

    AF086028.1 AK124710.1 AK125028.1 AK291681.1 AK294719.1 AK295650.1 AK300909.1 BC002706.2 
    BC041579.1 BC082992.1 BT007226.1 CR621450.1 M29366.1 M34309.1 S61953.1 U88357.1 
    U88358.1 U88359.1 U88360.1 

    20 DOTS entries:

    DT.98131702  DT.95179527  DT.100791868  DT.95102464  DT.101982408  DT.100700960  DT.213585  DT.100038754 
    DT.91963462  DT.75114482  DT.95184370  DT.86837952  DT.92440238  DT.101982406  DT.121128974  DT.121129014 
    DT.95082546  DT.121634328  DT.444493  DT.91823725 

    24/234 AceView cDNA sequences (see all 234 ):

    BQ440429 BU179810 BF726040 BQ225650 F13163 BQ682811 BQ721795 BU190632 
    BQ677065 BF198019 BF477611 AV709287 BQ218231 BE743512 BX479156 AA574146 
    M29366 BQ877641 BP357593 AU121609 AF086028 M34309 W92344 AL708682 

    highest scoring ESTs for ERBB3:

    M34309 H06628 AA179665 AA182581 AA565432 AA570304 AA661884 AA833967 AA919093 AI078622 

    Unigene Cluster for ERBB3:

    V-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)
    Hs.118681  [show with all ESTs]
    Unigene Representative Sequence: NM_001982


    GeneLoc Exon Structure

    5/12 Alternative Splicing Database (ASD) splice patterns (SP) for ERBB3 (see all 12 )

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14a · 14b ^ 15 ^ 16a · 16b · 16c ^ 17 ^
    SP1:                          -                 -                                                                                         -           -         
    SP2:                                                                                                                                      -           -         
    SP3:                                                                                                                                                            
    SP4:                          -                 -                                         -     -     -     -     -     -     -     -     -     -     -     -   
    SP5:                                                                                                                                                            

    ExUns: 18 ^ 19a · 19b · 19c ^ 20 ^ 21 ^ 22a · 22b ^ 23a · 23b ^ 24a · 24b ^ 25 ^ 26 ^ 27a · 27b ^ 28 ^ 29
    SP1:        -                             -           -                                                         
    SP2:        -           -     -     -     -     -     -                                                         
    SP3:                                      -           -                                                         
    SP4:  -     -     -     -     -     -     -     -     -     -     -     -     -     -     -                     
    SP5:                                                                                                            

    About this scheme

    ECgene alternative splicing isoforms for ERBB3

    2 Ensembl transcripts including schematic representations:
    ENST00000394099  ENST00000267101  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    ERBB3 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for ERBB3

    1 / 2 / 3

    16 probe-sets matching ERBB3 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    33639_g_at2, 3 U95-A 1 1.00 1.00 0.75 0.68 AA584202 0.60 0.83 0.73 1
    32787_at2, 3 U95-A 1 1.00 1.00 0.98 1.08 M34309 1.00 0.90 0.95 1
    1585_at2, 3 U95-A 1 1.00 1.00 0.99 1.17 M34309 1.00 0.90 0.95 1

    1723_g_at2, 3 U95-A 1 1.00 1.00 0.96 0.72 S61953 0.80 0.88 0.84 1

    2089_s_at2, 3 U95-A 1 1.00 1.00 0.98 0.93 H06628 0.80 1.00 0.91 1

    1742_at2, 3 U95-A 1 1.00 1.00 0.57 1.34 S61953 0.80 0.88 0.84 1
    48563_at2, 3 U95-B 1 1.00 1.00 0.97 1.78 AI565773 0.80 0.88 0.84 1

    33638_at2, 3 U95-A 1 0.56 1.00 0.24 0.44 AA584202 0.60 0.83 0.73 1

    202454_s_at2, 3 U133-A 1 1.00 1.00 -- -- NM_001982 0.60 0.83 0.73 1

    226213_at2, 3 U133-B 1 1.00 1.00 -- -- AV681807 0.60 0.83 0.73 1

    215638_at2, 3 U133-A 1 0.64 1.00 -- -- U88358 0.40 0.75 0.60 1

    202454_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    1563252_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    226213_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    1563253_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    215638_at2 U133Plus2 1 0.64 1.00 -- -- -- -- -- -- --
    GeneDecks  ERBB3 for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: TGCCGTAAAT

    SOURCE GeneReport for Unigene cluster: Hs.118681

    Expression variation in blood from EXPOLDB for ERBB3

    UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860
    Tissue specificity: Epithelial tissues and brain

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for ERBB3 gene from 5/6 species (see all 6 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    ERBB31   -- v-erb-b2 erythroblastic leukemia viral oncogene homolog more 90.53(n)
    93.39(a)
    481105  XM_538226.2  XP_538226.2 
    chimpanzee
    (Pan troglodytes)
    ERBB31   -- v-erb-b2 erythroblastic leukemia viral oncogene homolog more 99.75(n)
    99.85(a)
    451980  XM_509131.2  XP_509131.2 
    rat
    (Rattus norvegicus)
    Erbb31   -- v-erb-b2 erythroblastic leukemia viral oncogene homolog more 87.3(n)
    90.74(a)
    29496  NM_017218.2  NP_058914.2 
    mouse
    (Mus musculus)
    Erbb31, 5 10 (70.00 cM)5
    v-erb-b2 erythroblastic leukemia viral oncogene homolog more1, 5 86.97(n)1
    90.96(a)1
    138671  NM_010153.11  NP_034283.11 
     AA0496445  AF0591755  (see all 14)
    fruit fly
    (Drosophila melanogaster)
    Egfr3 57E9--F1 eggshell pattern formation epidermal
    growth factor more
    39(a)   --
    About this table        Species with no ortholog for ERBB3

    ENSEMBL Gene Tree for ERBB3
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for ERBB3 gene
    ERBB22  ERBB42  EGFR2  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/180 NCBI SNPs in ERBB3 are shown (see all 180 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 35)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 12 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs7731231,2
    A,C,F,H54781265(-) CCTGCT/ACCGGC 1 C/S mis1 ese313Minor allele frequency- A:0.12MN EU EA WA 1440
    rs37590931,2
    C,F,H54759815(+) CACCAA/GGTGAA 2 -- ng514Minor allele frequency- G:0.01MN EA EU WA 594
    --
    rs123201761,2
    C,F,H54772842(+) GCTCAA/GTGTCT 1 N/S mis14Minor allele frequency- G:0.01EU EA WA 406
    rs22711881,2
    C,F,H54781290(-) CTCCGC/TGTGGC 1 R/H mis1 ese312Minor allele frequency- T:0.01EA NA EU WA 2454
    rs38919211,2
    C,H54776895(+) TGACAG/CATGTA 1 H/D mis1 ese34Minor allele frequency- C:0.00EU EA WA 406
    --
    rs72971751,2
    A,C54760075(+) ATCCCC/TACTCC 2 -- ng510--------
    rs111717431,2
    C,H54781888(+) GAGGTG/AGTCCT 1 S/G mis14Minor allele frequency- A:0.00EU EA WA 418
    --
    rs171182921,2
    H54780260(-) ATGGGC/AATGTA 1 I/M mis1 ese34Minor allele frequency- A:0.00EU EA WA 406
    rs22711891,2
    C,F,H54781258(-) CGGCTC/TCTACA 1 R/R syn1 ese316Minor allele frequency- T:0.31EA EU WA NA 2660
    rs22290461,2
    C,F54773468(+) GAAATT/CAGTGC 1 I/I syn1 ese35Minor allele frequency- C:0.06MN NA EA 364
    About this table

    HapMap Linkage Disequilibrium images for ERBB3 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 190151   disorders: 607598  

    UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860

  • Overexpressed in a subset of human mammary tumors
  • Defects in ERBB3 are the cause of lethal congenital contracture syndrome type 2 (LCCS2)
    [MIM:607598]; also called Israeli Bedouin multiple contracture syndrome type A. LCCS2 is an
    autosomal recessive neurogenic form of a neonatally lethal arthrogryposis that is associated with
    atrophy of the anterior horn of the spinal cord. The LCCS2 syndrome is characterized by multiple
    joint contractures, anterior horn atrophy in the spinal cord, and a unique feature of a markedly
    distended urinary bladder. The phenotype suggests a spinal cord neuropathic etiology
  • 10/65 Novoseek disease relationships for ERBB3 gene (see all 65 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    breast cancer 70.88 95 17266042 (4), 18425425 (4), 18632642 (4), 15704104 (3) (see all 54)
    breast carcinoma 65.11 30 15770691 (3), 9823984 (2), 8732665 (2), 10473632 (2) (see all 21)
    viral leukemia 62.45 3 15150091 (1), 17275115 (1), 12021921 (1)
    tumors 59.48 154 18507044 (5), 18398842 (4), 19401448 (4), 11789762 (3) (see all 91)
    cancer 56.22 58 18404164 (3), 9712416 (3), 10535875 (2), 10066071 (2) (see all 42)
    nsclc 54.45 31 15731348 (6), 16843264 (3), 16288303 (2), 19150934 (2) (see all 15)
    carcinoma 49.09 55 9494565 (4), 7673253 (3), 11135221 (3), 8683379 (3) (see all 29)
    mammary tumor 42.84 6 16168116 (3), 2252277 (1), 10205169 (1)
    metastasis 40.85 43 18398842 (5), 18172732 (3), 18698037 (3), 12888923 (2) (see all 24)
    carcinoma squamous cell 38.81 20 7656248 (3), 9499191 (2), 10632356 (2), 15809707 (2) (see all 13)
    About this table

    Human Gene Mutation Database: ERBB3
    Genetic Association Database: ERBB3
    Human Genome Epidemiology Navigator: ERBB3 (13 documents)
    Tumor Gene Database: ERBB3
    Breast Cancer Gene Database: ERBB3

    (Possibly Related Articles in Doctor's Guide)
    About This Section

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/584 PubMed articles for ERBB3 gene (see all 584 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 2065 HGNC: 3431 AceView: ERBB3 Ensembl:ENSG00000065361 euGenes: HUgn2065
    ECgene: ERBB3 H-InvDB: ERBB3
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for ERBB3 Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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