ERBB3 Gene
protein-coding GIFtS : 76
GC12P054760
v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) (Previous name: lethal congenital contracture syndrome 2 )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbol: LCCS2 )
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Aliases & Descriptions for ERBB3
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.7.10.1 3 ErbB-3 2 HER3 1 , 2 , 3 LCCS2 2 , 5 MDA-BF-1 2 MGC88033 2 c-erbB-3 2 c-erbB3 2 , 3 erbB-3 2 erbB3-S 2 p180-ErbB3 2 p45-sErbB3 2 p85-sErbB3 2
Descriptions Tyrosine kinase-type cell surface receptor HER3 3 lethal congenital contracture syndrome 2 1 v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 2 v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) 2
Search outside databases for aliases for ERBB3 genePrevious GC identifers: GC12M056386 GC12M056841 GC12P056190
Summaries for ERBB3 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ERBB3 : This gene encodes a member of the epidermal growth factor receptor (EGFR) family of receptortyrosine kinases. This membrane-bound protein has a neuregulin binding domain but not an activekinase domain. It therefore can bind this ligand but not convey the signal into the cell throughprotein phosphorylation. However, it does form heterodimers with other EGF receptor family memberswhich do have kinase activity. Heterodimerization leads to the activation of pathways which leadto cell proliferation or differentiation. Amplification of this gene and/or overexpression of itsprotein have been reported in numerous cancers, including prostate, bladder, and breast tumors.Alternate transcriptional splice variants encoding different isoforms have been characterized. Oneisoform lacks the intermembrane region and is secreted outside the cell. This form acts tomodulate the activity of the membrane-bound form. Additional splice variants have also beenreported, but they have not been thoroughly characterized. [provided by RefSeq] UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860 Function : Binds and is activated by neuregulins and NTAK
Gene Wiki entry for ERBB3
Genomic Location for ERBB3
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ERBB3 gene Entrez Gene cytogenetic band: 12q13 Ensembl cytogenetic band: 12q13.2 HGNC cytogenetic band: 12q13 ERBB3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12P054760:
(about GC identifiers )
Start:
54,760,159 bp from pter
End:
54,783,395 bp from pter
Size:
23,237 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000012.10 NT_029419.11 Proteins for ERBB3
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860 (See
protein sequence )Recommended Name: Receptor tyrosine-protein kinase erbB-3 precursor Size : 1342 amino acids; 148098 Da
Subunit : Heterodimer with each of the other ERBB receptors (Potential). Interacts with CSPG5, PA2G4and MUC1
Subcellular location : Isoform 1: Cell membrane; Single-pass type I membrane protein
Subcellular location : Isoform 2: Secreted
PDB structures from and Proteopedia : 1M6B (3D)
 Alternative splicing : 2 isoforms : P21860-1 P21860-2
Post-translational modifications:
Ligand-binding increases phosphorylation on tyrosine residues and promotes its association with thep85 subunit of phosphatidylinositol 3-kinase (By similarity)1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001005915.1 NP_001973.2 ENSEMBL proteins: ENSP00000377659 ENSP00000267101 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 5/8 Gene Ontology (GO) cellular component terms (links to tree view) (see all 8
):
About this table Antibodies for ERBB3: Assays for ERBB3:
Protein
Domains/ Families for ERBB3(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P21860 ProtoNet protein and cluster: P21860
4 Blocks protein families : IPB000494 Epidermal growth-factor receptor (EGFR) IPB006211 Furin-like cysteine rich region IPB006212 Furin-like repeat IPB008266 Tyrosine protein kinase UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860 Domain : The cytoplasmic part of the receptor may interact with the SH2 or SH3 domains of manysignal-transducing proteins Similarity : Belongs to the protein kinase superfamily. Tyr protein kinase family. EGF receptorsubfamily Similarity : Contains 1 protein kinase domain
Gene Function for ERBB3
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (ERBB3 ) Millipore RNAi Products for the Analysis of ERBB3 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (ERBB3 )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001005915 Applied Biosystems Silencer ® siRNAs for ERBB3 Sigma-Aldrich siRNA and siRNA Panels for ERBB3 Sigma-Aldrich shRNA Panels and shRNA for ERBB3 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005915                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005915                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001005915  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001982 UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860 Function : Binds and is activated by neuregulins and NTAKCatalytic activity : ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphateEnzyme Number (IUBMB): EC 2.7.10.1
Genatlas biochemistry entry for ERBB3 :avian erythroblastic leukemia,viral (v-erb-b) oncogene homolog 3,heregulin beta 1 receptor,signaltransducer receptor,heterodimerizing with the ligand less recetpor ERBB2
15/16 MGI mutant phenotypes (inferred from 7 alleles ) (MGI details for Erbb3) (see all 16
):5/9 Gene Ontology (GO) molecular function terms (links to tree view) (see all 9
):
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Pathways & Interactions for ERBB3
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for ERBB3 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for ERBB3 5/101 Interacting proteins for ERBB3 (P21860 1 , 2 ENSP00000267101 3 ) via UniProtKB, MINT, and/or STRING (see all 101
)About this table 5/12 Gene Ontology (GO) biological process terms (links to tree view) (see all 12
):
GO ID Qualified GO term Evidence PubMed IDs GO:0006468 protein amino acid phosphorylation
IEA -- GO:0007162 negative regulation of cell adhesion
IDA 7556068 GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
IEA -- GO:0007507 heart development
IEA -- GO:0009968 negative regulation of signal transduction
IDA 11389077
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Drugs & Compounds for ERBB3 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for ERBB3
Sigma-Aldrich Small Molecules for ERBB3:Inhibitor
Compounds for ERBB3 available from Tocris Bioscience Compound Action
CAS
number HDS 029 Potent inhibitor of the ErbB receptor family JNJ 28871063 hydrochloride Potent ErbB receptor family inhibitor [944341-54-2] PD 158780 Potent ErbB receptor family inhibitor [171179-06-9]
About this table 10/23 Novoseek chemical compound relationships for ERBB3 gene (see all 23
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
tyrosine
83.12
224
7514177 (4), 7929151 (4), 8058768 (4), 11189010 (3) (see all 99 )
hrgbeta1
82.20
3
12209601 (2)
pertuzumab
77.63
8
17627612 (3), 18632642 (2), 17547474 (1)
phosphatidylinositol
64.73
45
7929151 (5), 7535767 (4), 9886492 (2), 8732665 (2) (see all 22 )
phosphotyrosine
55.35
7
8579117 (1), 12853564 (1), 10226586 (1), 8631031 (1) (see all 5 )
o-tyrosine
49.70
1
17983482 (1)
phosphoinositide
46.71
15
11546794 (4), 8550620 (2), 16127743 (1), 11114724 (1) (see all 9 )
wortmannin
45.18
1
9389501 (1)
apigenin
8.79
1
14602723 (1)
progesterone
3.86
4
11758715 (1), 8579117 (1), 18024331 (1), 15534105 (1)
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Transcripts for ERBB3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (ERBB3 ) Millipore RNAi Products for the Analysis of ERBB3 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (ERBB3 )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001005915 Sigma-Aldrich siRNA and siRNA Panels for ERBB3 Sigma-Aldrich shRNA Panels and shRNA for ERBB3 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001005915 NM_001982
REFSEQ mRNAs for ERBB3 gene (2 alternative transcripts): NM_001005915.1 NM_001982.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001005915 NM_001982
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005915                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005915                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001005915  
Additional cDNA sequence: AF086028.1 AK124710.1 AK125028.1 AK291681.1 AK294719.1 AK295650.1 AK300909.1 BC002706.2 BC041579.1 BC082992.1 BT007226.1 CR621450.1 M29366.1 M34309.1 S61953.1 U88357.1 U88358.1 U88359.1 U88360.1
20 DOTS entries : DT.98131702 DT.95179527 DT.100791868 DT.95102464 DT.101982408 DT.100700960 DT.213585 DT.100038754 DT.91963462 DT.75114482 DT.95184370 DT.86837952 DT.92440238 DT.101982406 DT.121128974 DT.121129014 DT.95082546 DT.121634328 DT.444493 DT.91823725
24/234 AceView cDNA sequences (see all 234
):BQ440429 BU179810 BF726040 BQ225650 F13163 BQ682811 BQ721795 BU190632 BQ677065 BF198019 BF477611 AV709287 BQ218231 BE743512 BX479156 AA574146 M29366 BQ877641 BP357593 AU121609 AF086028 M34309 W92344 AL708682
highest scoring ESTs for ERBB3 :M34309 H06628 AA179665 AA182581 AA565432 AA570304 AA661884 AA833967 AA919093 AI078622
Unigene Cluster for ERBB3: V-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) Hs.118681 [show with all ESTs ] Unigene Representative Sequence: NM_001982 GeneLoc Exon Structure 5/12 Alternative Splicing Database (ASD) splice patterns (SP) for ERBB3 (see all 12
) ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14a · 14b ^ 15 ^ 16a · 16b · 16c ^ 17 ^ SP1 :         -       -                               -     -     SP2 :                                             -     -     SP3 :                                                     SP4 :         -       -               -   -   -   -   -   -   -   -   -   -   -   -   SP5 :                                                    
ExUns: 18 ^ 19a · 19b · 19c ^ 20 ^ 21 ^ 22a · 22b ^ 23a · 23b ^ 24a · 24b ^ 25 ^ 26 ^ 27a · 27b ^ 28 ^ 29 SP1 :   -           -     -                     SP2 :   -     -   -   -   -   -   -                     SP3 :             -     -                     SP4 : -   -   -   -   -   -   -   -   -   -   -   -   -   -   -         SP5 :                                    
About this scheme ECgene alternative splicing isoforms for ERBB3 2 Ensembl transcripts including schematic representations : ENST00000394099
ENST00000267101
Expression for ERBB3
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ERBB3 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ERBB3 1 / 2 / 3
16 probe-sets matching ERBB3 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TGCCGTAAATSOURCE GeneReport for Unigene cluster: Hs.118681 Expression variation in blood from EXPOLDB for ERBB3
UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860 Tissue specificity : Epithelial tissues and brain
Orthologs for ERBB3
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ERBB3 gene from 5/6 species (see all 6
)
About this table Species with no ortholog for ERBB3 ENSEMBL Gene Tree for ERBB3 Paralogs for ERBB3 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ERBB3 gene ERBB2 2 ERBB4 2 EGFR 2
SNPs/Variants for ERBB3 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ERBB3 (up to first 250kb)
Disorders & Mutations for ERBB3
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 190151 disorders : 607598 UniProtKB/Swiss-Prot: ERBB3_HUMAN, P21860
Overexpressed in a subset of human mammary tumors Defects in ERBB3 are the cause of lethal congenital contracture syndrome type 2 (LCCS2)[MIM:607598]; also called Israeli Bedouin multiple contracture syndrome type A. LCCS2 is anautosomal recessive neurogenic form of a neonatally lethal arthrogryposis that is associated withatrophy of the anterior horn of the spinal cord. The LCCS2 syndrome is characterized by multiplejoint contractures, anterior horn atrophy in the spinal cord, and a unique feature of a markedlydistended urinary bladder. The phenotype suggests a spinal cord neuropathic etiology
10/65 Novoseek disease relationships for ERBB3 gene (see all 65
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
breast cancer
70.88
95
17266042 (4), 18425425 (4), 18632642 (4), 15704104 (3) (see all 54 )
breast carcinoma
65.11
30
15770691 (3), 9823984 (2), 8732665 (2), 10473632 (2) (see all 21 )
viral leukemia
62.45
3
15150091 (1), 17275115 (1), 12021921 (1)
tumors
59.48
154
18507044 (5), 18398842 (4), 19401448 (4), 11789762 (3) (see all 91 )
cancer
56.22
58
18404164 (3), 9712416 (3), 10535875 (2), 10066071 (2) (see all 42 )
nsclc
54.45
31
15731348 (6), 16843264 (3), 16288303 (2), 19150934 (2) (see all 15 )
carcinoma
49.09
55
9494565 (4), 7673253 (3), 11135221 (3), 8683379 (3) (see all 29 )
mammary tumor
42.84
6
16168116 (3), 2252277 (1), 10205169 (1)
metastasis
40.85
43
18398842 (5), 18172732 (3), 18698037 (3), 12888923 (2) (see all 24 )
carcinoma squamous cell
38.81
20
7656248 (3), 9499191 (2), 10632356 (2), 15809707 (2) (see all 13 )
About this table Human Gene Mutation Database : ERBB3 Genetic Association Database: ERBB3 Human Genome Epidemiology Navigator: ERBB3 (13 documents) Tumor Gene Database : ERBB3 Breast Cancer Gene Database : ERBB3
Medical News for ERBB3 (Possibly Related Articles in
Doctor's Guide )
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Publications for ERBB3 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/584 PubMed articles for ERBB3 gene (see all 584
): c-erbB3 gene encodes secreted as well as transmembrane receptor tyrosine kinase. (PubMed id 7685162) 1, 3, 4 Katoh M.... Terada M. (1993) Neuroglycan C, a novel member of the neuregulin family. (PubMed id 15358134) 1, 3, 4 Kinugasa Y....Higashiyama S. (2004) Lethal congenital contractural syndrome type 2 (LCCS2) is caused by a mutation in ERBB3 (Her3), a modulator of the phosphatidylinositol-3- kinase/Akt pathway. (PubMed id 17701904) 3, 4 Narkis G.... Birk O.S. (2007) An extended association screen in multiple sclerosis using 202 microsatellite markers targeting apoptosis-related genes does not reveal new predisposing factors. (PubMed id 16143043) 3, 6 Godde R....Epplen J.T. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Structure of the extracellular region of HER3 reveals an interdomain tether. (PubMed id 12154198) 3, 4 Cho H.S. and Leahy D.J. (2002) Regulation of the ErbB3 binding protein Ebp1 by protein kinase C. (PubMed id 11325528) 3, 4 Lessor T.J. and Hamburger A.W. (2001) Molecular cloning and expression of an additional epidermal growth factor receptor-related gene. (PubMed id 2164210) 3, 4 Plowman G.D.... Shoyab M. (1990) Isolation and characterization of ERBB3, a third member of the ERBB/epidermal growth factor receptor family: evidence for overexpression in a subset of human mammary tumors. (PubMed id 2687875) 3, 4 Kraus M.H.... Aaronson S.A. (1989) Dominant negative interference of transcription factor AP-2 causes inhibition of ErbB-3 expression and suppresses malignant cell growth. (PubMed id 11859873) 1, 3 Zhu C.H. and Domann F.E. (2002)
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