EPHX2 Gene
protein-coding GIFtS : 69
GCID: GC08 P027348
epoxide hydrolase 2, cytoplasmic
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Aliasesfor EPHX2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Epoxide Hydrolase 2, Cytoplasmic 1 2 Epoxide Hydratase2 CEH2 Epoxide Hydrolase 2, Cytosolic2 SEH2 Epoxide Hydrolase, Soluble2 Bifunctional Epoxide Hydrolase 22
Export aliases for EPHX2 gene to outside databases Previous GC identifers: GC08P027131 GC08P027853 GC08P027370 GC08P027404 GC08P025893
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Summariesfor EPHX2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for EPHX2 : This gene encodes a member of the epoxide hydrolase family. The protein, found in both the cytosol and peroxisomes, binds to specific epoxides and converts them to the corresponding dihydrodiols. Mutations in this gene have been associated with familial hypercholesterolemia. Alternatively spliced transcript variants have been described. (provided by RefSeq, Feb 2012) UniProtKB/Swiss-Prot: HYES_HUMAN, P34913 Function : Bifunctional enzyme. The C-terminal domain has epoxide hydrolase activity and acts on epoxides (alkeneoxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. The N-terminal domain has lipid phosphatase activity, with the highest activity towards threo-9,10-phosphonooxy-hydroxy-octadecanoic acid, followed by erythro-9,10-phosphonooxy-hydroxy-octadecanoic acid, 12-phosphonooxy-octadec-9Z-enoic acid, 12-phosphonooxy-octadec-9E-enoic acid, and p-nitrophenyl phospate Gene Wiki entry for EPHX2 (Epoxide hydrolase 2)
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Genomic Viewsfor EPHX2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000008.10 NC_018919.1 NT_167187.1 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the EPHX2 gene promoter: GR PPAR-alpha GR-beta GR-alpha NF-kappaB NF-kappaB1 Other transcription factors Search SABiosciences Chromatin IP Primers for EPHX2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat EPHX2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 8p21 Ensembl cytogenetic band: 8p21.2 HGNC cytogenetic band: 8p21 EPHX2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 8 GeneLoc Exon Structure
GeneLoc location for GC08P027348: view genomic region
(about GC identifiers )
Start:
27,348,296 bp from pter
End:
27,403,081 bp from pter
Size:
54,786 bases
Orientation:
plus strand
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Proteinsfor EPHX2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: HYES_HUMAN, P34913 (See
protein sequence )Recommended Name: Bifunctional epoxide hydrolase 2 Size : 555 amino acids; 62616 Da
Cofactor : Magnesium
Subunit : Homodimer
Subcellular location : Cytoplasm. Peroxisome
6/14 PDB 3D structures from and Proteopedia for EPHX2 (see all 14 ):1S8O (3D)
  1VJ5 (3D)
  1ZD2 (3D)
  1ZD3 (3D)
  1ZD4 (3D)
  1ZD5 (3D)
 
Secondary accessions : B2Z3B1 B3KTU8 B3KUA0 G3V134 J3KPH7 Q16764 Q9HBJ1 Q9HBJ2Alternative splicing : 3 isoforms : P34913-1 P34913-2 P34913-3 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for EPHX2: NX_P34913 Post-translational modifications:
The N-terminus is blocked1
The covalent modification of cysteine by 15-deoxy-Delta12,14-prostaglandin-J2 is autocatalytic and reversible. It may occur as an alternative to other cysteine modifications, such as S-nitrosylation and S-palmitoylation (Probable)1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P34913 EPHX2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (4 alternative transcripts):
NP_001243411.1 NP_001243412.1 NP_001243413.1 NP_001970.2 ENSEMBL proteins: ENSP00000430269 ENSP00000430779 ENSP00000428875 ENSP00000430302 ENSP00000369843 ENSP00000427956 ENSP00000428191 Reactome Protein details: P34913 Human Recombinant Protein Products: Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6 ): About this table
EPHX2 for ontologies About GeneDecksing EPHX2 Antibody Products: Assay Products for EPHX2:
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Protein
Domains / Familiesfor EPHX2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
EPHX2 for domains About GeneDecksing 5/6 InterPro domains/families (see all 6 ):
Graphical View of Domain Structure for InterPro Entry P34913 ProtoNet protein and cluster: P34913
4 Blocks protein families : IPB000073 Alpha/beta hydrolase fold IPB000639 Epoxide hydrolase signature IPB003089 Alpha/beta hydrolase fold signature IPB005833 Haloacid dehalogenase/epoxide hydrolase family signature UniProtKB/Swiss-Prot: HYES_HUMAN, P34913 Domain : The N-terminal domain has phosphatase activity. The C-terminal domain has epoxide hydrolase activitySimilarity : Belongs to the AB hydrolase superfamily. Epoxide hydrolase family
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Functionfor EPHX2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: HYES_HUMAN, P34913 Function : Bifunctional enzyme. The C-terminal domain has epoxide hydrolase activity and acts on epoxides (alkeneoxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. The N-terminal domain has lipid phosphatase activity, with the highest activity towards threo-9,10-phosphonooxy-hydroxy-octadecanoic acid, followed by erythro-9,10-phosphonooxy-hydroxy-octadecanoic acid, 12-phosphonooxy-octadec-9Z-enoic acid, 12-phosphonooxy-octadec-9E-enoic acid, and p-nitrophenyl phospate Catalytic activity : An epoxide + H(2)O = a glycolCatalytic activity : (9S,10S)-10-hydroxy-9-(phosphonooxy)octadecanoate + H(2)O = (9S,10S)-9,10-dihydroxyoctadecanoate +phosphate Biophysicochemical properties : Kinetic parameters: KM=21 uM for threo-9,10-phosphonooxy-hydroxy-octadecanoic acid;KM=1.1 mM for p-nitrophenyl phosphate; Vmax=338 nmol/min/mg enzyme with threo-9,10-phosphonooxy- hydroxy-octadecanoic acid; Vmax=5.8 nmol/min/mg enzyme with p-nitrophenyl phosphate; Induction : By compounds that cause peroxisome proliferation such as clofibrate, tiadenol and fenofibrate
Genatlas biochemistry entry for EPHX2 : epoxyde hydrolase,soluble Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for EPHX2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for EPHX2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: EPHX2 (NM_001979 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for EPHX2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat EPHX2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for EPHX2
Gene Ontology (GO): 5/11 molecular function terms (GO ID links to tree view) (see all 11 ): About this table
EPHX2 for ontologies About GeneDecksing 2 GenomeRNAi human phenotypes for EPHX2 :Animal Models: Mouse knock-out Ephx2 tm1Gonz for EPHX2 2 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Ephx2) :
EPHX2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor EPHX2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/7 super-pathways (see all 7 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Arachidonic acid metabolism 2 Metabolism 3 Naphthalene metabolism 4 ATP/ITP metabolism 5 Synthesis of epoxy (EET) and dihydroxyeicosatrienoic acids (DHET)
Pathway sources See GeneCards unified pathways Show all pathways 3 EMD Millipore Pathways for EPHX2 3 GeneGo (Thomson Reuters) Pathways for EPHX2 2 BioSystems Pathways for EPHX2 4
Reactome Pathways for EPHX2 3
Kegg Pathways (Kegg details for EPHX2) :
EPHX2 for pathways About GeneDecksing Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for EPHX2 STRING Interaction
Network Preview (showing 5 interactants - click image to see 11)5/11 Interacting proteins for EPHX2 (P34913 2 , 3 ENSP00000369843 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 11 )About this table Gene Ontology (GO): 5/15 biological process terms (GO ID links to tree view) (see all 15 ): About this table
EPHX2 for ontologies About GeneDecksing
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Drugs & Compoundsfor EPHX2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
EPHX2 for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for EPHX2
Browse Tocris compounds for EPHX2 10/12 HMDB Compounds for EPHX2 (see all 12 ) About this table Compound Synonyms
CAS
# PubMed Ids 11,12-DiHETrE 11,12-Dihydroxyeicosatrienoic acid (see all 13 ) 192461-95-3 -- 11,12-Epoxyeicosatrienoic acid 10-(3-(2-octenyl)oxiranyl)-5,8-Decadienoic acid (see all 15 ) 81276-02-0 -- 14,15-DiHETrE 14,15-dihydroxy-5Z,8Z,11Z-eicosatrienoic acid (see all 10 ) 77667-09-5 -- 14,15-Epoxy-5,8,11-eicosatrienoic acid (5Z,8Z,11Z)-14,15-Epoxyicosa-5.8.11-trienoic acid (see all 11 ) 81276-03-1 -- 15-Epi-lipoxin A4 15-epi-LXA(,4) (see all 7 ) -- -- 15-Epi-lipoxin B5 5(S),14(R),15(S)-trihydroxy-6E,8Z,10E,12E,17Z-eicosapentaenoic acid anion (see all 3 ) -- -- 5,6-DHET 5,6-DiHETrE (see all 9 ) 213382-49-1 -- 5,6-Epoxy-8,11,14-eicosatrienoic acid 5,6-epoxy-8Z,11Z,14Z-eicosatrienoic acid (see all 9 ) 81246-84-6 -- 8,9-DiHETrE (5Z,11Z,14Z)-8,9-Dihydroxyicosa-5,11,14-trienoic acid (see all 10 ) 192461-96-4 -- 8,9-Epoxyeicosatrienoic acid 8,9-epoxy-5Z,11Z,14Z-eicosatrienoic acid (see all 10 ) 81246-85-7 --
7 DrugBank Compounds for EPHX2 About this table 10/82 Novoseek chemical compound relationships for EPHX2 gene (see all 82 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
epoxide
98.7
1098
14665429 (9), 9635886 (8), 1958232 (7), 19671760 (7) (see all 99 )
cis-stilbene oxide
85
2
2272333 (1), 1936901 (1)
tcpo
80.9
8
8240407 (1), 8961944 (1), 10426800 (1), 11397396 (1) (see all 6 )
3-butene-1,2-diol
80.8
1
9280411 (1)
styrene oxide
80.1
19
8452475 (2), 7818768 (2), 8314768 (1), 7694107 (1) (see all 12 )
benzo(a)pyrene 4,5-oxide
79.6
1
8314768 (1)
butadiene monoxide
78
16
9280411 (3), 1638680 (2), 9016811 (1), 8070886 (1) (see all 8 )
(2,3-epoxypropyl)benzene
77.2
1
8886614 (1)
benzeneoxide
73.8
1
8723729 (1)
valpromide
73.5
4
8877250 (1), 1352988 (1), 8156045 (1), 8453849 (1)
Search CenterWatch for drugs/clinical trials and news about EPHX2 / HYES
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Transcriptsfor EPHX2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for EPHX2 gene (4 alternative transcripts): NM_001256482.1 NM_001256483.1 NM_001256484.1 NM_001979.5 Unigene Cluster for EPHX2:
Epoxide hydrolase 2, cytoplasmic Hs.212088 [show with all ESTs ] Unigene Representative Sequence: NM_001979 12 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000521400 (uc003xfu.3 uc010luv.3 uc003xfv.3 uc010luw.3 )ENST00000518328 ENST00000520623 (uc011lam.1 uc010lut.1 ) ENST00000517536 ENST00000521780 ENST00000380476 ENST00000518379 ENST00000520666 ENST00000521684 ENST00000523827 ENST00000521924 ENST00000523326 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for EPHX2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for EPHX2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: EPHX2 (NM_001979 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for EPHX2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat EPHX2
Additional cDNA sequence: AF233334.1 AF233335.1 AF233336.1 AK096089.1 AK096770.1 AK294065.1 AK303904.1 AK308041.1 AK310507.1 BC007708.2 BC011628.2 BC013874.2 BT006885.1 L05779.1
17 DOTS entries : DT.75103390 DT.100809993
DT.315914 DT.100806588 DT.100809998 DT.100809988 DT.101978938 DT.100809987 DT.315917 DT.120636852 DT.91744851 DT.100765345 DT.100809991 DT.120636795 DT.120636851 DT.91744853 DT.75132055 24/279 AceView cDNA sequences (see all 279 ):
CR590835 R01942 BT006885 AK096089 BM756809 AW271666 AF233334 AW173361 BF330315 AU122049 N26807 AW665862 BM702969 CA394497 BQ267755 BX642653 BC011628 CB121777 NM_001979 AI245624 BI771523 AA300747 CB137687 BU729448 GeneLoc Exon Structure 5/11 Alternative Splicing Database (ASD) splice patterns (SP) for EPHX2 (see all 11 ) About this scheme ExUns: 1 ^ 2a · 2b · 2c · 2d ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ SP1 :           -             -           -                     SP2 :           -   -   -         -           -                     SP3 :           -   -           -           -                     SP4 :           -             -           -   -                   SP5 :   -   -       -                                          
ExUns: 18 ^ 19 ^ 20 ^ 21 SP1 :         SP2 :         SP3 :         SP4 :         SP5 :        
ECgene alternative splicing isoforms for EPHX2
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Expression for EPHX2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section EPHX2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: AATGCATCGT
About this image EPHX2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Heart Left Ventricle Heart Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
Stem Cell Differentiation: 1 LifeMap Cell Name Category Blimp1- mVenus and stella-ECFP genetically modified stem cells (Embryonic Stem Cell)Early Embryo, Inner Cell Mass
See EPHX2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for EPHX2 SOURCE GeneReport for Unigene cluster: Hs.212088 SABiosciences Expression via Pathway-Focused PCR Arrays including EPHX2 (see all 6 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for EPHX2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat EPHX2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat EPHX2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat EPHX2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for EPHX2
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Orthologsfor EPHX2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for EPHX2 gene from 6/22 species (see all 22 ) About this table
ENSEMBL Gene Tree for EPHX2 (if available)TreeFam Gene Tree for EPHX2 (if available)
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Paralogsfor EPHX2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for EPHX2 gene EPHX4 2 EPHX3 2 2 SIMAP similar genes for EPHX2 using alignment to 5 protein entries: HYES_HUMAN (see all proteins ):ACAD10 EPHX4
EPHX2 for paralogs About GeneDecksing
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Genomic Variantsfor EPHX2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
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Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 8 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for EPHX2 (27348296 - 27403081 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for EPHX2 1 CNV : 70327 Human Gene Mutation Database (HGMD) : EPHX2 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing EPHX2
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Disorders
/ Diseasesfor EPHX2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
EPHX2 for disorders About GeneDecksing OMIM gene information: 132811 OMIM disorders : 143890 20/50 diseases for EPHX2 (see all 50 ): About MalaCards hypercholesterolemia, familial, due to ldlr defect, modifier of hypercholesterolemia familial hypercholesterolemia fetal hydantoin syndrome pre-eclampsia non-hodgkin lymphoma hellp syndrome spontaneous abortion orolaryngeal cancer toxic shock syndrome arterial calcification staphyloenterotoxemia hodgkin's lymphoma coronary heart disease bronchial asthma chronic lymphocytic leukemia lymphocytic leukemia insulin resistance mastitis eclampsia 3 diseases from the University of Copenhagen DISEASES database for EPHX2 :Staphyloenterotoxemia Toxic shock syndrome Mastitis 10/27 Novoseek disease relationships for EPHX2 gene (see all 27 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
fetal hydantoin syndrome
71.5
1
8711731 (1)
inflammation
32.8
34
19519461 (2), 16962614 (2), 15196990 (1), 15963942 (1) (see all 21 )
nasal epithelium
21.9
1
11551533 (1)
hellp syndrome
13.3
1
11283205 (1)
cancer lung
12.2
4
1538419 (1), 19721221 (1), 12935919 (1), 7728947 (1)
hepatocellular carcinoma
12
6
8380119 (3), 7892276 (1), 8851825 (1), 1339049 (1)
acute respiratory distress
11.4
1
17435320 (1)
cardiovascular diseases
10.2
12
16961727 (2), 18537101 (2), 16729954 (1), 20425256 (1) (see all 8 )
lymphoma
4.91
2
11406608 (1), 12397416 (1)
respiratory distress syndrome
3.46
1
17435320 (1)
Genetic Association Database (GAD): EPHX2 Human Genome Epidemiology (HuGE) Navigator: EPHX2 (39 documents) Export disorders for EPHX2 gene to outside databases
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Publicationsfor EPHX2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for EPHX2 gene, integrated from 9 sources (see all 408 ): (articles sorted by number of sources associating them with EPHX2) Utopia : connect your pdf to the dynamic world of online information
Genetic variation in soluble epoxide hydrolase (EPHX2) and risk of coronary heart disease: The Atherosclerosis Risk in Communities (ARIC) study. (PubMed id 16595607) 1 , 4, 9 Lee C.R....Zeldin D.C. (2006) Structure of human epoxide hydrolase reveals mechanistic inferences on bifunctional catalysis in epoxide and phosphate ester hydrolysis. (PubMed id 15096040) 1 , 2 , 9 Gomez G.A.... Christianson D.W. (2004) Genetic polymorphisms of microsomal and soluble epoxide hydrolase and the risk of Parkinson's disease. (PubMed id 11692079) 1 , 4, 9 Farin F.M....Checkoway H. (2001) Identification and functional characterization of human soluble epoxide hydrolase genetic polymorphisms. (PubMed id 10862610) 1 , 2 , 9 Sandberg M.... Omiecinski C.J. (2000) Association of soluble epoxide hydrolase gene polymorphism with insulin resistance in type 2 diabetic patients. (PubMed id 15845398) 1 , 4, 9 Ohtoshi K....Yamasaki Y. (2005) Polymorphism of the soluble epoxide hydrolase is associated with coronary artery calcification in African-American subjects: The Coronary Artery Risk Development in Young Adults (CARDIA) study. (PubMed id 14732757) 1 , 4, 9 Fornage M....Wong N.D. (2004) Structural characterization of the human soluble epoxide hydrolase gene (EPHX2). (PubMed id 8619856) 1 , 2 , 9 Sandberg M. and Meijer J. (1996) cDNA cloning and expression of a soluble epoxide hydrolase from human liver. (PubMed id 8342951) 1 , 2 , 9 Beetham J.K.... Hammock B.D. (1993) The soluble epoxide hydrolase gene harbors sequence variation associated with susceptibility to and protection from incident ischemic stroke. (PubMed id 16115816) 1 , 4, 9 Fornage M....Boerwinkle E. (2005) The soluble epoxide hydrolase encoded by EPXH2 is a bifunctional enzyme with novel lipid phosphate phosphatase activity. (PubMed id 12574510) 1 , 2 , 9 Newman J.W....Hammock B.D. (2003)
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External Searches for EPHX2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing EPHX2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing EPHX2 gene
(According to HUGE )
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Specialized Databases showing EPHX2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for EPHX2 gene: Search GeneIP for patents involving EPHX2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor EPHX2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for EPHX2 OriGene shRNA RFP for EPHX2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for EPHX2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for EPHX2 OriGene Protein Over-expression Lysate for EPHX2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for EPHX2 OriGene 3'-UTR Clone for EPHX2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for EPHX2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for EPHX2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for EPHX2 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for EPHX2 OriGene Custom Protein Services for EPHX2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat EPHX2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing EPHX2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat EPHX2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat EPHX2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat EPHX2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat EPHX2
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EPHX2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for EPHX2
Search ThermoFisher Antibodies for EPHX2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat EPHX2
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