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Aliases for ENSG00000280987 Gene

Aliases for ENSG00000280987 Gene

  • Matrin 3 5
  • MATR3 5

External Ids for ENSG00000280987 Gene

Summaries for ENSG00000280987 Gene

GeneCards Summary for ENSG00000280987 Gene

ENSG00000280987 is a Protein Coding gene. An important paralog of this gene is MATR3.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000280987 Gene

Genomics for ENSG00000280987 Gene

Regulatory Elements for ENSG00000280987 Gene

Enhancers for ENSG00000280987 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G139270 1.8 FANTOM5 Ensembl ENCODE 0.7 +1.3 1295 8.2 MLX CREB3L1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 TBX21 MEF2D SLC23A1 DNAJC18 PURA KDM3B LOC105379194 MATR3 LRRTM2 ENSG00000252213 ENSG00000280987 SNHG4
GH05G139261 1.2 Ensembl ENCODE 0.4 -10.9 -10857 1.9 ARID4B SIN3A ZNF2 ZNF766 ZNF143 ZNF207 DEK ZNF263 ZHX2 REST SLC23A1 SNHG4 ENSG00000280987 MATR3 RNU6-572P
GH05G139268 0.8 Ensembl 0.4 -5.1 -5052 0.2 SOX13 CTCF PYGO2 RAD21 EGR1 SCRT2 RELB IKZF2 CREM SCRT1 SLC23A1 SNHG4 MATR3 ENSG00000280987 RNU6-572P
GH05G139245 1 Ensembl ENCODE 0.3 -27.3 -27259 1.1 ETV1 JUN ZKSCAN1 FOSL1 ZFHX2 GLIS2 EGR1 FOS EGR2 MAZ RNU6-572P ENSG00000280987 SNHG4 MATR3
GH05G139251 0.8 ENCODE 0.3 -21.9 -21930 0.7 BCOR CTCF PTBP1 ETV1 ZMYM3 EBF1 RAD21 ADNP ZNF143 SMC3 ENSG00000252213 MATR3 HSPA9 ENSG00000280987 SNHG4 RNU6-572P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000280987 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000280987 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000187617 748 1801 PKNOX1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF143

Genomic Location for ENSG00000280987 Gene

Chromosome:
5
Start:
139,273,752 bp from pter
End:
139,331,671 bp from pter
Size:
57,920 bases
Orientation:
Plus strand

Genomic View for ENSG00000280987 Gene

Genes around ENSG00000280987 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000280987 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000280987 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000280987 Gene

Proteins for ENSG00000280987 Gene

  • Protein details for ENSG00000280987 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0R4J2E8
    Recommended name:
    Matrin-3
    Protein Accession:
    A0A0R4J2E8

    Protein attributes for ENSG00000280987 Gene

    Size:
    847 amino acids
    Molecular mass:
    94623 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000280987 Gene

Post-translational modifications for ENSG00000280987 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000280987 Gene

Domains & Families for ENSG00000280987 Gene

Protein Domains for ENSG00000280987 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000280987: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000280987 Gene

Function for ENSG00000280987 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000280987 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with ENSG00000280987: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ENSG00000280987 Gene

Localization for ENSG00000280987 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000280987 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ENSG00000280987: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ENSG00000280987 Gene

Pathways & Interactions for ENSG00000280987 Gene

SuperPathways for ENSG00000280987 Gene

No Data Available

Interacting Proteins for ENSG00000280987 Gene

Gene Ontology (GO) - Biological Process for ENSG00000280987 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000280987 Gene

Drugs & Compounds for ENSG00000280987 Gene

No Compound Related Data Available

Transcripts for ENSG00000280987 Gene

mRNA/cDNA for ENSG00000280987 Gene

(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000280987 Gene

No ASD Table

Relevant External Links for ENSG00000280987 Gene

GeneLoc Exon Structure for
ENSG00000280987

Expression for ENSG00000280987 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000280987 Gene

Orthologs for ENSG00000280987 Gene

Evolution for ENSG00000280987 Gene

ENSEMBL:
Gene Tree for ENSG00000280987 (if available)
TreeFam:
Gene Tree for ENSG00000280987 (if available)

No data available for Orthologs for ENSG00000280987 Gene

Paralogs for ENSG00000280987 Gene

Paralogs for ENSG00000280987 Gene

Pseudogenes.org Pseudogenes for ENSG00000280987 Gene

genes like me logo Genes that share paralogs with ENSG00000280987: view

Variants for ENSG00000280987 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000280987 Gene

Disorders for ENSG00000280987 Gene

No disorders were found for ENSG00000280987 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000280987 Gene

Publications for ENSG00000280987 Gene

No publications were found for ENSG00000280987 Gene.

Products for ENSG00000280987 Gene

Sources for ENSG00000280987 Gene

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