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Aliases for ENSG00000261832 Gene

Aliases for ENSG00000261832 Gene

  • RP11-435I10.4 5

External Ids for ENSG00000261832 Gene

Previous GeneCards Identifiers for ENSG00000261832 Gene

  • GC16M028477

Summaries for ENSG00000261832 Gene

GeneCards Summary for ENSG00000261832 Gene

ENSG00000261832 is a Protein Coding gene. Diseases associated with ENSG00000261832 include Ceroid Lipofuscinosis, Neuronal, 11. An important paralog of this gene is CLN3.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000261832 Gene

Genomics for ENSG00000261832 Gene

Regulatory Elements for ENSG00000261832 Gene

Enhancers for ENSG00000261832 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G028490 1.4 ENCODE dbSUPER 0.7 -1.9 -1930 6.9 MLX DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 SSRP1 ZNF610 ENSG00000261766 SULT1A2 NPIPB9 RPS15AP33 ENSG00000260796 NPIPB8 ENSG00000251417 CDC37P1 APOBR TUFM
GH16G028480 1.4 ENCODE dbSUPER 0.4 +11.2 11191 1.0 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 ZNF143 SULT1A2 ENSG00000261766 ENSG00000251417 NPIPB7 ENSG00000261832
GH16G028488 0.7 ENCODE 0.7 +3.3 3274 0.1 ESRRA MTA2 NR2F1 DPF2 TBX21 ATF2 SREBF1 CTBP1 IKZF1 NBN ENSG00000261832 NPIPB7
GH16G028481 0.8 dbSUPER 0.4 +9.7 9692 0.8 ATF1 GTF2E2 BACH1 YY1 FOSL1 FOXK2 POLR2A EED ZNF143 ETV6 ENSG00000261832 NPIPB7
GH16G028477 0.6 dbSUPER 0.4 +14.3 14263 0.4 ZFHX2 NR2F1 NBN DPF2 RELB TBX21 EGR2 TUFM NPIPB7 ENSG00000261832
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000261832 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000261832 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000280231 398 1801 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 ZNF207

Genomic Location for ENSG00000261832 Gene

Chromosome:
16
Start:
28,456,371 bp from pter
End:
28,492,098 bp from pter
Size:
35,728 bases
Orientation:
Minus strand

Genomic View for ENSG00000261832 Gene

Genes around ENSG00000261832 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261832 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261832 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261832 Gene

Proteins for ENSG00000261832 Gene

  • Protein details for ENSG00000261832 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GTS8
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GTS8

    Protein attributes for ENSG00000261832 Gene

    Size:
    47 amino acids
    Molecular mass:
    4996 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000261832 Gene

Protein Expression for ENSG00000261832 Gene

Post-translational modifications for ENSG00000261832 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261832 Gene

Domains & Families for ENSG00000261832 Gene

Protein Domains for ENSG00000261832 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000261832: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000261832 Gene

Function for ENSG00000261832 Gene

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261832 Gene

Localization for ENSG00000261832 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ENSG00000261832 gene
Compartment Confidence
lysosome 3
mitochondrion 2
endosome 2
endoplasmic reticulum 1
cytosol 1
golgi apparatus 1

Gene Ontology (GO) - Cellular Components for ENSG00000261832 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with ENSG00000261832: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for ENSG00000261832 Gene

Pathways & Interactions for ENSG00000261832 Gene

SuperPathways for ENSG00000261832 Gene

No Data Available

Interacting Proteins for ENSG00000261832 Gene

Gene Ontology (GO) - Biological Process for ENSG00000261832 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261832 Gene

Transcripts for ENSG00000261832 Gene

mRNA/cDNA for ENSG00000261832 Gene

(12) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261832 Gene

No ASD Table

Relevant External Links for ENSG00000261832 Gene

GeneLoc Exon Structure for
ENSG00000261832

Expression for ENSG00000261832 Gene

Protein differential expression in normal tissues from HIPED for ENSG00000261832 Gene

This gene is overexpressed in Urine (15.2), Amniocyte (15.0), and Fetal ovary (13.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from PaxDb and MOPED for ENSG00000261832 Gene



No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261832 Gene

Orthologs for ENSG00000261832 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ENSG00000261832 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 76 (a)
OneToMany
dog
(Canis familiaris)
Mammalia CLN3 35
  • 75 (a)
OneToMany
cow
(Bos Taurus)
Mammalia -- 35
  • 73 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Cln3 35
  • 72 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 64 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 59 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 49 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii cln3 35
  • 41 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta cln3 35
  • 36 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea cln-3.2 35
  • 36 (a)
ManyToMany
cln-3.1 35
  • 35 (a)
ManyToMany
cln-3.3 35
  • 35 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes YHC3 35
  • 33 (a)
OneToMany
Species where no ortholog for ENSG00000261832 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ENSG00000261832 Gene

ENSEMBL:
Gene Tree for ENSG00000261832 (if available)
TreeFam:
Gene Tree for ENSG00000261832 (if available)

Paralogs for ENSG00000261832 Gene

Paralogs for ENSG00000261832 Gene

genes like me logo Genes that share paralogs with ENSG00000261832: view

Variants for ENSG00000261832 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000261832 Gene

Disorders for ENSG00000261832 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000261832 Gene - From: DISEASES

Disorder Aliases PubMed IDs
ceroid lipofuscinosis, neuronal, 11
  • neuronal ceroid lipofuscinosis 11
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000261832: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261832 Gene

Publications for ENSG00000261832 Gene

No publications were found for ENSG00000261832 Gene.

Products for ENSG00000261832 Gene

Sources for ENSG00000261832 Gene

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