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Aliases for ENSG00000259943 Gene

Subcategory (RNA class) for ENSG00000259943 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000259943 Gene

  • RP1-39G22.7 5

External Ids for ENSG00000259943 Gene

ORGUL Members for ENSG00000259943 Gene

Previous GeneCards Identifiers for ENSG00000259943 Gene

  • GC01M040722

Summaries for ENSG00000259943 Gene

GeneCards Summary for ENSG00000259943 Gene

ENSG00000259943 is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000259943 Gene

Genomics for ENSG00000259943 Gene

Regulatory Elements for ENSG00000259943 Gene

Enhancers for ENSG00000259943 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G040849 1.4 Ensembl ENCODE dbSUPER 30.9 -592.3 -592274 0.9 HDGF ATF1 ARNT ZSCAN4 WRNIP1 RAD21 RFX5 ZNF143 ZNF548 CREM ENSG00000259943 EXO5 NFYC-AS1 KCNQ4 MIR30C1 MIR30E NFYC RLF RIMS3 COL9A2
GH01G040372 1.8 FANTOM5 ENCODE dbSUPER 22.6 -117.9 -117886 5.9 CREB3L1 AGO1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 SMAP2 PPIEL EXO5 ENSG00000259943 NFYC-AS1 ENSG00000182109 ZFP69 PABPC4 ENSG00000231296 ZMPSTE24
GH01G040690 1.4 ENCODE dbSUPER 23.8 -434.7 -434735 4.4 CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF263 SP3 NFYC TBX21 MEF2D RIMS3 ENSG00000259943 LOC105378674 ZFP69 NFYC-AS1 MIR30E MIR30C1 KCNQ4 GC01P040752
GH01G039391 2 FANTOM5 Ensembl ENCODE dbSUPER 13.3 +861.7 861729 10.2 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A YY1 ZNF766 FOS DEK PABPC4 ENSG00000259943 LOC101929516 PPIEL SNORA55 OXCT2P1 MYCBP KIAA0754 MACF1 BMP8A
GH01G039520 0.9 dbSUPER 26.5 +737.1 737139 0.3 ZNF493 ZFP64 ZEB1 ZNF354C ZNF680 ZNF654 ZBTB11 ZNF426 OVOL3 REST PPIEL ENSG00000259943 EXO5 RLF ENSG00000182109 GC01P039520 PIR37850
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000259943 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000259943 Gene

Chromosome:
1
Start:
40,256,427 bp from pter
End:
40,257,967 bp from pter
Size:
1,541 bases
Orientation:
Minus strand

Genomic View for ENSG00000259943 Gene

Genes around ENSG00000259943 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259943 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259943 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259943 Gene

Proteins for ENSG00000259943 Gene

Post-translational modifications for ENSG00000259943 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259943 Gene

Domains & Families for ENSG00000259943 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000259943 Gene

Function for ENSG00000259943 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259943 Gene

Localization for ENSG00000259943 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000259943 Gene

Pathways & Interactions for ENSG00000259943 Gene

SuperPathways for ENSG00000259943 Gene

No Data Available

Interacting Proteins for ENSG00000259943 Gene

Gene Ontology (GO) - Biological Process for ENSG00000259943 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000259943 Gene

Drugs & Compounds for ENSG00000259943 Gene

No Compound Related Data Available

Transcripts for ENSG00000259943 Gene

mRNA/cDNA for ENSG00000259943 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259943 Gene

No ASD Table

Relevant External Links for ENSG00000259943 Gene

GeneLoc Exon Structure for
ENSG00000259943

Expression for ENSG00000259943 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000259943 Gene

genes like me logo Genes that share expression patterns with ENSG00000259943: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259943 Gene

Orthologs for ENSG00000259943 Gene

Evolution for ENSG00000259943 Gene

ENSEMBL:
Gene Tree for ENSG00000259943 (if available)
TreeFam:
Gene Tree for ENSG00000259943 (if available)

No data available for Orthologs for ENSG00000259943 Gene

Paralogs for ENSG00000259943 Gene

No data available for Paralogs for ENSG00000259943 Gene

Variants for ENSG00000259943 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000259943 Gene

Disorders for ENSG00000259943 Gene

No disorders were found for ENSG00000259943 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259943 Gene

Publications for ENSG00000259943 Gene

No publications were found for ENSG00000259943 Gene.

Products for ENSG00000259943 Gene

Sources for ENSG00000259943 Gene

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