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Aliases for ENSG00000259877 Gene

Subcategory (RNA class) for ENSG00000259877 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000259877 Gene

  • RP11-46C24.7 5

External Ids for ENSG00000259877 Gene

ORGUL Members for ENSG00000259877 Gene

Previous GeneCards Identifiers for ENSG00000259877 Gene

  • GC16M089281

Summaries for ENSG00000259877 Gene

GeneCards Summary for ENSG00000259877 Gene

ENSG00000259877 is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000259877 Gene

Genomics for ENSG00000259877 Gene

Regulatory Elements for ENSG00000259877 Gene

Enhancers for ENSG00000259877 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G089993 1.6 Ensembl ENCODE dbSUPER 95.8 -777.6 -777595 3.5 HDGF PKNOX1 FOXA2 CREB3L1 ARNT ZFP64 ARID4B SIN3A ZNF2 ZBTB7B ENSG00000259877 AFG3L1P MC1R LINC00304 SPG7 DBNDD1 LOC101927863 GAS8 SNORD68 URAHP
GH16G088329 2 FANTOM5 Ensembl ENCODE dbSUPER 42.2 +884.8 884797 6.0 HDGF PKNOX1 ARNT SIN3A YBX1 ZBTB7B ZNF766 ZNF207 FOS KLF13 ENSG00000259877 ENSG00000268218 LOC100289580 LOC339059 ENSG00000260279 LOC100129215 CTU2 LINC00304 ENSG00000260121 ZCCHC14
GH16G089558 1.7 Ensembl ENCODE dbSUPER 45.3 -345.0 -344973 7.9 CREB3L1 MLX AGO1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ENSG00000259877 RPL13 AFG3L1P MC1R SPG7 LINC00304 CTU2 LOC101927863 CDK10 SNORD68
GH16G088809 1.4 ENCODE dbSUPER 44.1 +406.4 406376 4.4 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF548 SP3 ENSG00000259877 GALNS SNORD68 ENSG00000260121 CTU2 LOC101927863 APRT RPL13 SPG7 TRAPPC2L
GH16G088743 1.7 Ensembl ENCODE dbSUPER 31.2 +471.9 471898 4.9 MLX AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 ENSG00000259877 SNORD68 CTU2 ENSG00000260121 ENSG00000268218 ZNF778 PIEZO1 SPG7 RPL13 TRAPPC2L
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000259877 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000259877 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000089654 53 2001 PKNOX1 MLX CREB3L1 ARNT AGO1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1

Genomic Location for ENSG00000259877 Gene

Chromosome:
16
Start:
89,215,211 bp from pter
End:
89,217,653 bp from pter
Size:
2,443 bases
Orientation:
Minus strand

Genomic View for ENSG00000259877 Gene

Genes around ENSG00000259877 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259877 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259877 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259877 Gene

Proteins for ENSG00000259877 Gene

Post-translational modifications for ENSG00000259877 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259877 Gene

Domains & Families for ENSG00000259877 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000259877 Gene

Function for ENSG00000259877 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259877 Gene

Localization for ENSG00000259877 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000259877 Gene

Pathways & Interactions for ENSG00000259877 Gene

SuperPathways for ENSG00000259877 Gene

No Data Available

Interacting Proteins for ENSG00000259877 Gene

Gene Ontology (GO) - Biological Process for ENSG00000259877 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000259877 Gene

Drugs & Compounds for ENSG00000259877 Gene

No Compound Related Data Available

Transcripts for ENSG00000259877 Gene

mRNA/cDNA for ENSG00000259877 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259877 Gene

No ASD Table

Relevant External Links for ENSG00000259877 Gene

GeneLoc Exon Structure for
ENSG00000259877

Expression for ENSG00000259877 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000259877 Gene

genes like me logo Genes that share expression patterns with ENSG00000259877: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259877 Gene

Orthologs for ENSG00000259877 Gene

Evolution for ENSG00000259877 Gene

ENSEMBL:
Gene Tree for ENSG00000259877 (if available)
TreeFam:
Gene Tree for ENSG00000259877 (if available)

No data available for Orthologs for ENSG00000259877 Gene

Paralogs for ENSG00000259877 Gene

No data available for Paralogs for ENSG00000259877 Gene

Variants for ENSG00000259877 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000259877 Gene

Disorders for ENSG00000259877 Gene

No disorders were found for ENSG00000259877 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259877 Gene

Publications for ENSG00000259877 Gene

No publications were found for ENSG00000259877 Gene.

Products for ENSG00000259877 Gene

Sources for ENSG00000259877 Gene

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