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Aliases for ENSG00000254553 Gene

Aliases for ENSG00000254553 Gene

  • RP1-27O5.3 5

External Ids for ENSG00000254553 Gene

Previous GeneCards Identifiers for ENSG00000254553 Gene

  • GC01P032932
  • GC01P032934

Summaries for ENSG00000254553 Gene

GeneCards Summary for ENSG00000254553 Gene

ENSG00000254553 is a Protein Coding gene. An important paralog of this gene is ZBTB8B.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000254553 Gene

Genomics for ENSG00000254553 Gene

Regulatory Elements for ENSG00000254553 Gene

Enhancers for ENSG00000254553 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G032520 1.2 Ensembl ENCODE 11.8 +55.7 55736 0.8 ATF1 PKNOX1 ARNT ZNF2 ZNF121 ZNF143 DEK SP3 REST KAT8 ENSG00000254553 ZBTB8B SYNC FNDC5 GC01P032505 GC01M032519
GH01G032496 1 Ensembl ENCODE 12.3 +31.2 31227 0.6 HDGF PKNOX1 ETV1 BMI1 CEBPG ZBTB40 IRF9 ZNF766 PRDM10 ZNF362 ZBTB8B ENSG00000254553 ZBTB8A ENSG00000224409 RBBP4 ZBTB8OS LOC105378629 FNDC5 GC01P032498
GH01G032414 1 ENCODE 11.7 -50.9 -50943 0.2 HDGF PKNOX1 ATF1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 ENSG00000254553 ZBTB8B MARCKSL1 HDAC1 SYNC ENSG00000270850 GAPDHP20
GH01G032493 0.8 ENCODE 12.3 +27.6 27565 0.1 HINFP ZNF175 FOSL1 TCF12 EGR1 NCOR1 NR2F6 TRIM24 HES1 SMARCE1 ENSG00000254553 ZBTB8B ZBTB8A RBBP4 ZBTB8OS LOC105378629 FNDC5 GC01P032498
GH01G032494 0.8 ENCODE 12.3 +29.3 29320 1.7 SOX13 PKNOX1 ATF1 TAL1 CEBPG TCF12 ZFHX2 NCOR1 TRIM24 PRDM10 ENSG00000254553 ZBTB8B ZBTB8A RBBP4 ZBTB8OS LOC105378629 FNDC5 TSSK3 GC01P032498
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000254553 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000254553 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000004366 43 201 PKNOX1 ZSCAN4 SIN3A ZNF76 ZNF2 ZNF48 ZEB1 ETS1 ZNF121 GLIS2
ENSR00000251088 -357 201 MXI1 PKNOX1 SUZ12 ZNF76 ZNF2 ZNF48 ZEB1 ETS1 HIC1 ZNF121

Genomic Location for ENSG00000254553 Gene

Chromosome:
1
Start:
32,465,057 bp from pter
End:
32,600,792 bp from pter
Size:
135,736 bases
Orientation:
Plus strand

Genomic View for ENSG00000254553 Gene

Genes around ENSG00000254553 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000254553 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254553 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000254553 Gene

Proteins for ENSG00000254553 Gene

Post-translational modifications for ENSG00000254553 Gene

No Post-translational modifications

Other Protein References for ENSG00000254553 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000254553 Gene

Domains & Families for ENSG00000254553 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000254553 Gene

Function for ENSG00000254553 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254553 Gene

Localization for ENSG00000254553 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000254553 Gene

Pathways & Interactions for ENSG00000254553 Gene

SuperPathways for ENSG00000254553 Gene

No Data Available

Interacting Proteins for ENSG00000254553 Gene

Gene Ontology (GO) - Biological Process for ENSG00000254553 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000254553 Gene

Drugs & Compounds for ENSG00000254553 Gene

No Compound Related Data Available

Transcripts for ENSG00000254553 Gene

mRNA/cDNA for ENSG00000254553 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254553 Gene

No ASD Table

Relevant External Links for ENSG00000254553 Gene

GeneLoc Exon Structure for
ENSG00000254553

Expression for ENSG00000254553 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000254553 Gene

genes like me logo Genes that share expression patterns with ENSG00000254553: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254553 Gene

Orthologs for ENSG00000254553 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000254553 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 95 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 86 (a)
OneToMany
cow
(Bos Taurus)
Mammalia -- 35
  • 82 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Zbtb8b 35
  • 81 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 74 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 72 (a)
OneToMany
chicken
(Gallus gallus)
Aves ZBTB8B 35
  • 73 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii zbtb8b 35
  • 47 (a)
OneToMany
Species where no ortholog for ENSG00000254553 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000254553 Gene

ENSEMBL:
Gene Tree for ENSG00000254553 (if available)
TreeFam:
Gene Tree for ENSG00000254553 (if available)

Paralogs for ENSG00000254553 Gene

Paralogs for ENSG00000254553 Gene

genes like me logo Genes that share paralogs with ENSG00000254553: view

Variants for ENSG00000254553 Gene

Variation tolerance for ENSG00000254553 Gene

Gene Damage Index Score: 0.09; 2.01% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for ENSG00000254553 Gene

Disorders for ENSG00000254553 Gene

No disorders were found for ENSG00000254553 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000254553 Gene

Publications for ENSG00000254553 Gene

No publications were found for ENSG00000254553 Gene.

Products for ENSG00000254553 Gene

Sources for ENSG00000254553 Gene

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