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Aliases for ENSG00000253939 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000253939 Gene

  • RP11-44K6.3 5

External Ids for ENSG00000253939 Gene

Previous GeneCards Identifiers for ENSG00000253939 Gene

  • GC08M039761

Summaries for ENSG00000253939 Gene

GeneCards Summary for ENSG00000253939 Gene

ENSG00000253939 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000253939 Gene

Genomics for ENSG00000253939 Gene

Regulatory Elements for ENSG00000253939 Gene

Enhancers for ENSG00000253939 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G039947 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.5 +44.9 44850 4.8 HDAC1 PKNOX1 ATF1 NFRKB YY1 TCF12 GATA2 RELB ETV6 IKZF2 IDO1 ENSG00000253939 LOC100420944 ENSG00000254287 PIR34651 LOC100420480
GH08G040170 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.7 -178.9 -178941 7.1 HNRNPUL1 PKNOX1 FOXA2 MLX SIN3A ARID4B YY1 SLC30A9 FOS DEK C8orf4 LOC100420944 ENSG00000253939 IDO1 ENSG00000254143 LOC105379387
GH08G039946 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +51.1 51132 1.0 PKNOX1 DDX20 RBBP5 PYGO2 IRF9 ZNF740 CAVIN1 NR4A1 CEBPB TEAD2 IDO1 ENSG00000254287 ENSG00000253939 LOC100420944 LOC100420480 PIR34651
GH08G039945 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +49.5 49543 1.0 HDAC1 KLF1 JUN PYGO2 FOSL1 ZNF316 NCOR1 TRIM24 NFE2 SMARCE1 ENSG00000254287 IDO1 ENSG00000253939 LOC100420944 LOC100420480 PIR34651
GH08G039939 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +55.3 55348 1.4 NFIC MTA2 IKZF1 RELB IRF1 IKZF2 ZNF83 IDO1 LOC100420944 ENSG00000253939 LOC100420480 PIR34651
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000253939 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000253939 Gene

Chromosome:
8
Start:
39,903,775 bp from pter
End:
39,995,248 bp from pter
Size:
91,474 bases
Orientation:
Minus strand

Genomic View for ENSG00000253939 Gene

Genes around ENSG00000253939 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000253939 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000253939 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000253939 Gene

Proteins for ENSG00000253939 Gene

Post-translational modifications for ENSG00000253939 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000253939 Gene

Domains & Families for ENSG00000253939 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000253939 Gene

Function for ENSG00000253939 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253939 Gene

Localization for ENSG00000253939 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000253939 Gene

Pathways & Interactions for ENSG00000253939 Gene

SuperPathways for ENSG00000253939 Gene

No Data Available

Interacting Proteins for ENSG00000253939 Gene

Gene Ontology (GO) - Biological Process for ENSG00000253939 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000253939 Gene

Drugs & Compounds for ENSG00000253939 Gene

No Compound Related Data Available

Transcripts for ENSG00000253939 Gene

mRNA/cDNA for ENSG00000253939 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000253939 Gene

No ASD Table

Relevant External Links for ENSG00000253939 Gene

GeneLoc Exon Structure for
ENSG00000253939

Expression for ENSG00000253939 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000253939 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000253939 Gene

This gene is overexpressed in Liver (x26.5), Testis (x10.9), and Thyroid (x10.1).
genes like me logo Genes that share expression patterns with ENSG00000253939: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253939 Gene

Orthologs for ENSG00000253939 Gene

Evolution for ENSG00000253939 Gene

ENSEMBL:
Gene Tree for ENSG00000253939 (if available)
TreeFam:
Gene Tree for ENSG00000253939 (if available)

No data available for Orthologs for ENSG00000253939 Gene

Paralogs for ENSG00000253939 Gene

No data available for Paralogs for ENSG00000253939 Gene

Variants for ENSG00000253939 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000253939 Gene

Disorders for ENSG00000253939 Gene

No disorders were found for ENSG00000253939 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253939 Gene

Publications for ENSG00000253939 Gene

No publications were found for ENSG00000253939 Gene.

Products for ENSG00000253939 Gene

Sources for ENSG00000253939 Gene

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