Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000253390 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000253390 Gene

  • AC104561.1 5

External Ids for ENSG00000253390 Gene

Previous GeneCards Identifiers for ENSG00000253390 Gene

  • GC08P023316

Summaries for ENSG00000253390 Gene

GeneCards Summary for ENSG00000253390 Gene

ENSG00000253390 is an RNA Gene.

Additional gene information for ENSG00000253390 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000253390 Gene

Genomics for ENSG00000253390 Gene

Regulatory Elements for ENSG00000253390 Gene

Enhancers for ENSG00000253390 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H023426 1.2 Ensembl ENCODE 21.1 -31.1 -31077 2 ELF3 FOXA2 MLX ARID4B DNMT3B THRB RARA YY1 CREM MIXL1 ENTPD4 ENSG00000253390 R3HCC1 CHMP7 LOXL2 GC08P023434 PIR51990
GH08H023409 1.4 Ensembl ENCODE dbSUPER 16.5 -47.8 -47757 3 HDAC1 PKNOX1 RB1 ZSCAN4 ARID4B SIN3A ZNF2 RAD21 RARA EGR1 ENTPD4 ENSG00000253390 R3HCC1 CHMP7 LOXL2 SLC25A37 RHOBTB2 PIR45078
GH08H023538 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.8 +82.3 82318 5 SIN3A FEZF1 ZNF766 ZNF143 FOS DEK SREBF1 NFIL3 ATF4 SMARCA4 ENTPD4 ENSG00000253390 SLC25A37 STC1 TNFRSF10B TNFRSF10C GC08M023551
GH08H023550 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +94.5 94452 5 TBP FOXA2 ATF1 BRCA1 RAD21 RARA RFX5 YY1 SCRT2 RCOR1 SLC25A37 ENTPD4 ENSG00000253390 EGR3 ENSG00000253200 TNFRSF10B GC08M023551
GH08H023557 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +101.5 101492 4 ELF3 FOXA2 ZSCAN9 RAD21 RARA YY1 RCOR1 FOS ETV6 IKZF2 SLC25A37 ENTPD4 ENSG00000253390 NKX3-1 RNU4-71P ENSG00000253200 EGR3 TNFRSF10C TNFRSF10B GC08M023551
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000253390 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000253390 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000222227 -1001 1601 PKNOX1 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF766 GLIS2 ZNF143

Genomic Location for ENSG00000253390 Gene

Chromosome:
8
Start:
23,458,601 bp from pter
End:
23,484,971 bp from pter
Size:
26,371 bases
Orientation:
Plus strand

Genomic View for ENSG00000253390 Gene

Genes around ENSG00000253390 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000253390 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000253390 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000253390 Gene

Proteins for ENSG00000253390 Gene

Post-translational modifications for ENSG00000253390 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000253390 Gene

Domains & Families for ENSG00000253390 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000253390 Gene

Function for ENSG00000253390 Gene

Phenotypes From GWAS Catalog for ENSG00000253390 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253390 Gene

Localization for ENSG00000253390 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000253390 Gene

Pathways & Interactions for ENSG00000253390 Gene

SuperPathways for ENSG00000253390 Gene

No Data Available

Interacting Proteins for ENSG00000253390 Gene

Gene Ontology (GO) - Biological Process for ENSG00000253390 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000253390 Gene

Drugs & Compounds for ENSG00000253390 Gene

No Compound Related Data Available

Transcripts for ENSG00000253390 Gene

mRNA/cDNA for ENSG00000253390 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000253390 Gene

No ASD Table

Relevant External Links for ENSG00000253390 Gene

GeneLoc Exon Structure for
ENSG00000253390

Expression for ENSG00000253390 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000253390 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000253390 Gene

This gene is overexpressed in Pancreas (x6.8).
genes like me logo Genes that share expression patterns with ENSG00000253390: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253390 Gene

Orthologs for ENSG00000253390 Gene

Evolution for ENSG00000253390 Gene

ENSEMBL:
Gene Tree for ENSG00000253390 (if available)
TreeFam:
Gene Tree for ENSG00000253390 (if available)

No data available for Orthologs for ENSG00000253390 Gene

Paralogs for ENSG00000253390 Gene

No data available for Paralogs for ENSG00000253390 Gene

Variants for ENSG00000253390 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000253390 Gene

Disorders for ENSG00000253390 Gene

No disorders were found for ENSG00000253390 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253390 Gene

Publications for ENSG00000253390 Gene

No publications were found for ENSG00000253390 Gene.

Products for ENSG00000253390 Gene

Sources for ENSG00000253390 Gene

Content
Loading form....