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Aliases for ENSG00000252919 Gene

Subcategory (RNA class) for ENSG00000252919 Gene

Y RNA

Quality Score for this RNA gene is

3

Aliases for ENSG00000252919 Gene

  • Y RNA 5
  • Y_RNA 5

External Ids for ENSG00000252919 Gene

ORGUL Members for ENSG00000252919 Gene

Previous GeneCards Identifiers for ENSG00000252919 Gene

  • GC14M050058

Summaries for ENSG00000252919 Gene

GeneCards Summary for ENSG00000252919 Gene

ENSG00000252919 is an RNA Gene, and is affiliated with the Y RNA class.

fRNAdb sequence ontologies for ENSG00000252919 Gene

  • Y RNA: Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs -- hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin. This family includes a significant number of annotated pseudogenes and the model is expected to discriminate poorly between real and Y RNA related pseudogenes.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000252919 Gene

Genomics for ENSG00000252919 Gene

Regulatory Elements for ENSG00000252919 Gene

Enhancers for ENSG00000252919 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G049594 1.4 Ensembl ENCODE 0.4 -5.2 -5184 7.8 MLX CREB3L1 AGO1 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF263 RPL36AL LRR1 MGAT2 KLHDC2 POLE2 VCPKMT RHOQP1 ENSG00000252919
GH14G049593 0.6 ENCODE 0.7 -0.9 -861 0.2 ZFHX2 GATA2 ZNF398 FOS PRDM10 ZIC2 MAFK ZBTB17 LRR1 MGAT2 RPL36AL RHOQP1 ENSG00000252919
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000252919 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000252919 Gene

Chromosome:
14
Start:
49,592,236 bp from pter
End:
49,592,337 bp from pter
Size:
102 bases
Orientation:
Minus strand

Genomic View for ENSG00000252919 Gene

Genes around ENSG00000252919 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000252919 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000252919 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000252919 Gene

ORGUL Member Location for ENSG00000252919 gene

No data available for RefSeq DNA sequence for ENSG00000252919 Gene

Proteins for ENSG00000252919 Gene

Post-translational modifications for ENSG00000252919 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000252919 Gene

Domains & Families for ENSG00000252919 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000252919 Gene

Function for ENSG00000252919 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000252919 Gene

Localization for ENSG00000252919 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000252919 Gene

Pathways & Interactions for ENSG00000252919 Gene

SuperPathways for ENSG00000252919 Gene

No Data Available

Interacting Proteins for ENSG00000252919 Gene

Gene Ontology (GO) - Biological Process for ENSG00000252919 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000252919 Gene

Drugs & Compounds for ENSG00000252919 Gene

No Compound Related Data Available

Transcripts for ENSG00000252919 Gene

mRNA/cDNA for ENSG00000252919 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000252919 Gene

No ASD Table

Relevant External Links for ENSG00000252919 Gene

GeneLoc Exon Structure for
ENSG00000252919

Expression for ENSG00000252919 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000252919 Gene

genes like me logo Genes that share expression patterns with ENSG00000252919: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000252919 Gene

Orthologs for ENSG00000252919 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ENSG00000252919 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 35
  • 99 (a)
OneToOne
Species where no ortholog for ENSG00000252919 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000252919 Gene

ENSEMBL:
Gene Tree for ENSG00000252919 (if available)
TreeFam:
Gene Tree for ENSG00000252919 (if available)

Paralogs for ENSG00000252919 Gene

No data available for Paralogs for ENSG00000252919 Gene

Variants for ENSG00000252919 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000252919 Gene

Disorders for ENSG00000252919 Gene

No disorders were found for ENSG00000252919 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000252919 Gene

Publications for ENSG00000252919 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for ENSG00000252919 Gene

Sources for ENSG00000252919 Gene

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