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Aliases for ENSG00000252699 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000252699 Gene

  • Small Nucleolar RNA SNORA21 5
  • SNORA21 5

External Ids for ENSG00000252699 Gene

Previous GeneCards Identifiers for ENSG00000252699 Gene

  • GC17M037007

Summaries for ENSG00000252699 Gene

GeneCards Summary for ENSG00000252699 Gene

ENSG00000252699 is an RNA Gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000252699 Gene

Genomics for ENSG00000252699 Gene

Regulatory Elements for ENSG00000252699 Gene

Enhancers for ENSG00000252699 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F038876 0.9 Ensembl ENCODE 13 -30.5 -30490 11.1 PKNOX1 ZFP64 SIN3A ARID4B FEZF1 GLI4 ETS1 ZNF121 GLIS2 SP5 RPL23 RPS20P35 SNORA21 ENSG00000252699 C17orf98 CWC25 PSMB3 LASP1 PCGF2 PPP1R1B
GH17F038867 1.2 FANTOM5 ENCODE 12.8 -20.0 -20045 9.2 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 CDK12 ENSG00000266469 MED1 ENSG00000275665 SNORA21 ENSG00000275532 CWC25 LINC02079 PSMB3 ENSG00000252699
GH17F038895 1.1 Ensembl ENCODE 12.5 -47.8 -47758 7.7 HDGF ATF1 ARNT ZFP64 ARID4B SIN3A YY1 ZNF121 GATA2 FOS SNORA21 MED1 ENSG00000266469 LASP1 ENSG00000275532 RPS20P35 ENSG00000252699 RPL23 ENSG00000275665 CWC25
GH17F038889 1 Ensembl ENCODE 12.2 -40.6 -40639 5.0 PKNOX1 ZFP64 ZNF2 YY1 ZNF766 GATA2 ZNF143 DEK ZNF263 REST LASP1 RPL23 RPS20P35 SNORA21 ENSG00000252699 CWC25 PIP4K2B PSMB3 GC17M038893
GH17F039090 1.4 FANTOM5 Ensembl ENCODE 5.4 -243.8 -243769 10.5 ZFP64 ZBTB40 RAD21 RARA SCRT2 EGR2 CEBPB REST ZNF518A ZNF623 PLXDC1 ENSG00000275532 LRRC37A11P ENSG00000275665 ENSG00000266469 SNORA21 LOC100287808 MED1 PNMT ENSG00000252699
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ENSG00000252699 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000252699 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001535662 -1541 2801 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1

Genomic Location for ENSG00000252699 Gene

Chromosome:
17
Start:
38,851,524 bp from pter
End:
38,851,659 bp from pter
Size:
136 bases
Orientation:
Minus strand

Genomic View for ENSG00000252699 Gene

Genes around ENSG00000252699 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000252699 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000252699 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000252699 Gene

Proteins for ENSG00000252699 Gene

Post-translational modifications for ENSG00000252699 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000252699 Gene

Domains & Families for ENSG00000252699 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000252699 Gene

Function for ENSG00000252699 Gene

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000252699 Gene

Localization for ENSG00000252699 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000252699 Gene

Pathways & Interactions for ENSG00000252699 Gene

SuperPathways for ENSG00000252699 Gene

No Data Available

Interacting Proteins for ENSG00000252699 Gene

Gene Ontology (GO) - Biological Process for ENSG00000252699 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000252699 Gene

Transcripts for ENSG00000252699 Gene

mRNA/cDNA for ENSG00000252699 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000252699 Gene

No ASD Table

Relevant External Links for ENSG00000252699 Gene

GeneLoc Exon Structure for
ENSG00000252699

Expression for ENSG00000252699 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000252699 Gene

genes like me logo Genes that share expression patterns with ENSG00000252699: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ENSG00000252699 Gene

Orthologs for ENSG00000252699 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000252699 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA21 35
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA21 35
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia SNORA21 35
  • 72 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA21 35
  • 71 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA21 35
  • 68 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA21 35
  • 62 (a)
ManyToMany
Species where no ortholog for ENSG00000252699 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000252699 Gene

ENSEMBL:
Gene Tree for ENSG00000252699 (if available)
TreeFam:
Gene Tree for ENSG00000252699 (if available)

Paralogs for ENSG00000252699 Gene

No data available for Paralogs for ENSG00000252699 Gene

Variants for ENSG00000252699 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000252699 Gene

Disorders for ENSG00000252699 Gene

No disorders were found for ENSG00000252699 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000252699 Gene

Publications for ENSG00000252699 Gene

No publications were found for ENSG00000252699 Gene.

Products for ENSG00000252699 Gene

Sources for ENSG00000252699 Gene

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