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Aliases for ENSG00000252443 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000252443 Gene

  • Small Nucleolar RNA SNORA62/SNORA6 Family 5
  • SNORA62 5

External Ids for ENSG00000252443 Gene

Summaries for ENSG00000252443 Gene

GeneCards Summary for ENSG00000252443 Gene

ENSG00000252443 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000252443 Gene

Genomics for ENSG00000252443 Gene

Regulatory Elements for ENSG00000252443 Gene

Enhancers for ENSG00000252443 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G069829 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -45.9 -45895 5.4 HNRNPUL1 FOXA2 PKNOX1 ZFP64 ARID4B SLC30A9 ZNF766 ZNF302 CBX5 FOS PDPR LOC400541 SF3B3 LOC100506083 NQO1 NONOP1 ENSG00000252443 WWP2 PDXDC2P PDXDC2P-NPIPB14P
GH16G069402 2 FANTOM5 Ensembl ENCODE dbSUPER 9.5 +377.9 377936 11.5 PKNOX1 FOXA2 MLX ZFP64 ARID4B FEZF1 DMAP1 YY1 SLC30A9 ZNF302 PDPR LOC400541 NONOP1 TMED6 LOC100506083 UTP4 TERF2 MIR1538 NFAT5 NIP7
GH16G069721 1.7 FANTOM5 ENCODE dbSUPER 11 +60.9 60862 7.2 CREB3L1 MLX DMAP1 SLC30A9 ZNF143 ZNF263 SP3 NFYC SSRP1 RCOR2 SF3B3 NONOP1 CHTF8 PDPR NPIPB14P PDXDC2P-NPIPB14P NIP7 PDXDC2P EXOSC6 NOB1
GH16G069820 1.5 Ensembl ENCODE dbSUPER 11.4 -35.7 -35710 2.3 FOXA2 MLX SIN3A ARID4B DMAP1 ZNF48 ZNF143 FOS SP5 MIER2 NPIPB14P MIR140 CLEC18A ENSG00000252443 WWP2 PDXDC2P PDXDC2P-NPIPB14P NQO1 LOC100506083 GC16P069921
GH16G069857 1.5 Ensembl ENCODE dbSUPER 11.3 -74.2 -74164 5.6 FOXA2 MLX ARID4B ZNF48 TCF12 ZNF121 SP5 ZHX2 MXD4 MIER2 NPIPB14P ENSG00000252443 WWP2 AARS DDX19B PDXDC2P-NPIPB14P NQO1 LOC100506083 CLEC18A PDXDC2P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000252443 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000252443 Gene

Chromosome:
16
Start:
69,785,994 bp from pter
End:
69,786,113 bp from pter
Size:
120 bases
Orientation:
Minus strand

Genomic View for ENSG00000252443 Gene

Genes around ENSG00000252443 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000252443 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000252443 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000252443 Gene

Proteins for ENSG00000252443 Gene

Post-translational modifications for ENSG00000252443 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000252443 Gene

Domains & Families for ENSG00000252443 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000252443 Gene

Function for ENSG00000252443 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000252443 Gene

Localization for ENSG00000252443 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000252443 Gene

Pathways & Interactions for ENSG00000252443 Gene

SuperPathways for ENSG00000252443 Gene

No Data Available

Interacting Proteins for ENSG00000252443 Gene

Gene Ontology (GO) - Biological Process for ENSG00000252443 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000252443 Gene

Drugs & Compounds for ENSG00000252443 Gene

No Compound Related Data Available

Transcripts for ENSG00000252443 Gene

mRNA/cDNA for ENSG00000252443 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000252443 Gene

No ASD Table

Relevant External Links for ENSG00000252443 Gene

GeneLoc Exon Structure for
ENSG00000252443

Expression for ENSG00000252443 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000252443 Gene

genes like me logo Genes that share expression patterns with ENSG00000252443: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000252443 Gene

Orthologs for ENSG00000252443 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000252443 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA62 35
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA62 35 35 35 35 35 35
  • 64 (a)
OneToMany
cow
(Bos Taurus)
Mammalia SNORA62 35
  • 55 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA62 35
  • 49 (a)
OneToMany
mouse
(Mus musculus)
Mammalia SNORA62 35
  • 43 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA62 35
  • 40 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA62 35
  • 40 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA62 35
  • 45 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA62 35
  • 43 (a)
ManyToMany
Species where no ortholog for ENSG00000252443 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000252443 Gene

ENSEMBL:
Gene Tree for ENSG00000252443 (if available)
TreeFam:
Gene Tree for ENSG00000252443 (if available)

Paralogs for ENSG00000252443 Gene

No data available for Paralogs for ENSG00000252443 Gene

Variants for ENSG00000252443 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000252443 Gene

Disorders for ENSG00000252443 Gene

No disorders were found for ENSG00000252443 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000252443 Gene

Publications for ENSG00000252443 Gene

No publications were found for ENSG00000252443 Gene.

Products for ENSG00000252443 Gene

Sources for ENSG00000252443 Gene

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