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Aliases for ENSG00000248993 Gene

Aliases for ENSG00000248993 Gene

  • XXbac-BPG181M17.5 5

External Ids for ENSG00000248993 Gene

Summaries for ENSG00000248993 Gene

GeneCards Summary for ENSG00000248993 Gene

ENSG00000248993 is a Protein Coding gene. An important paralog of this gene is HLA-DMB.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000248993 Gene

Genomics for ENSG00000248993 Gene

Regulatory Elements for ENSG00000248993 Gene

Enhancers for ENSG00000248993 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F032951 1 ENCODE 0.8 -0.7 -724 3.9 HDGF PKNOX1 ATF1 WRNIP1 ZNF133 ARID4B SIN3A GATA2 ZNF143 FOS DXO HCG25 BRD2 RXRB LEMD2 VPS52 HLA-DOB HLA-DPA1 LYPLA2P1 HLA-DMA
GH06F032940 1.4 FANTOM5 ENCODE 0.4 +8.9 8926 8.8 HDGF ATF1 WRNIP1 SIN3A ARID4B BRCA1 ZNF2 YY1 ZNF143 ZNF207 HLA-DMA BRD2 PSMB9 TAP1 TAP2 HLA-DMB BRD2-IT1 HLA-DPA1 ENSG00000250264 MIR6873
GH06F032950 0.5 ENCODE 0.8 +3.0 2964 0.2 SCRT1 SCRT2 SPI1 TAP1 PSMB9 TAP2 ENSG00000250264 HLA-DRB1 ENSG00000248993 HLA-DMB
GH06F032963 0.7 Ensembl 0.4 -11.2 -11179 1.4 KLF1 MCM3 PLRG1 MNT OSR2 CTBP1 GATA3 ZNF366 HDAC2 POLR2A HLA-DMB EGFL8 TAP1 PSMB9 PSMB8 PSMB8-AS1 PPT2 RING1 HLA-DRB6 GC06M032966
GH06F032962 0.5 Ensembl 0.4 -9.6 -9579 0.6 ZNF366 NFE2 EMSY HLA-DMB TAP1 PSMB9 HLA-DPA1 HLA-DOB GC06M032966 ENSG00000248993
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000248993 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000248993 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001879887 322 1201 HDGF ELF3 TBP PKNOX1 ATF1 WRNIP1 ARID4B SIN3A RAD21 RFX5

Genomic Location for ENSG00000248993 Gene

Chromosome:
6
Start:
32,937,364 bp from pter
End:
32,953,122 bp from pter
Size:
15,759 bases
Orientation:
Minus strand

Genomic View for ENSG00000248993 Gene

Genes around ENSG00000248993 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000248993 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000248993 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000248993 Gene

Proteins for ENSG00000248993 Gene

  • Protein details for ENSG00000248993 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    F6UB75
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    F6UB75

    Protein attributes for ENSG00000248993 Gene

    Size:
    175 amino acids
    Molecular mass:
    19438 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000248993 Gene

Post-translational modifications for ENSG00000248993 Gene

No Post-translational modifications

Other Protein References for ENSG00000248993 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000248993 Gene

Domains & Families for ENSG00000248993 Gene

Protein Domains for ENSG00000248993 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000248993: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000248993 Gene

Function for ENSG00000248993 Gene

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000248993 Gene

Localization for ENSG00000248993 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000248993 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IEA --
GO:0042613 MHC class II protein complex IEA --
genes like me logo Genes that share ontologies with ENSG00000248993: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ENSG00000248993 Gene

Pathways & Interactions for ENSG00000248993 Gene

SuperPathways for ENSG00000248993 Gene

No Data Available

Interacting Proteins for ENSG00000248993 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000412457%0d%0a9606.ENSP00000363976%0d%0a
Selected Interacting proteins: ENSP00000412457 for ENSG00000248993 Gene via STRING

Symbol External ID(s) Details
HLA-DMA

Gene Ontology (GO) - Biological Process for ENSG00000248993 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019882 antigen processing and presentation IEA --
genes like me logo Genes that share ontologies with ENSG00000248993: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000248993 Gene

Transcripts for ENSG00000248993 Gene

mRNA/cDNA for ENSG00000248993 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000248993 Gene

No ASD Table

Relevant External Links for ENSG00000248993 Gene

GeneLoc Exon Structure for
ENSG00000248993

Expression for ENSG00000248993 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000248993 Gene

mRNA expression in normal human tissues for ENSG00000248993 Gene
genes like me logo Genes that share expression patterns with ENSG00000248993: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ENSG00000248993 Gene

Orthologs for ENSG00000248993 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000248993 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia PATR-DMB 35
  • 53 (a)
OneToMany
cow
(Bos Taurus)
Mammalia HLA-DMB 35
  • 43 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 43 (a)
OneToMany
mouse
(Mus musculus)
Mammalia H2-DMb2 35
  • 40 (a)
ManyToMany
H2-DMb1 35
  • 39 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 33 (a)
OneToMany
chicken
(Gallus gallus)
Aves DMB2 35
  • 16 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 6 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii mhc2dbb 35
  • 12 (a)
ManyToMany
si:busm1-104n07.3 35
  • 10 (a)
ManyToMany
wu:fd58b11 35
  • 10 (a)
ManyToMany
mhc2dab 35
  • 9 (a)
ManyToMany
si:busm1-194e12.12 35
  • 9 (a)
ManyToMany
si:busm1-228j01.4 35
  • 9 (a)
ManyToMany
si:dkey-33b17.3 35 35
  • 9 (a)
ManyToMany
si:busm1-228j01.6 35
  • 8 (a)
ManyToMany
si:zfos-2070c2.3 35
  • 5 (a)
ManyToMany
Species where no ortholog for ENSG00000248993 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000248993 Gene

ENSEMBL:
Gene Tree for ENSG00000248993 (if available)
TreeFam:
Gene Tree for ENSG00000248993 (if available)

Paralogs for ENSG00000248993 Gene

genes like me logo Genes that share paralogs with ENSG00000248993: view

Variants for ENSG00000248993 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000248993 Gene

Disorders for ENSG00000248993 Gene

No disorders were found for ENSG00000248993 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000248993 Gene

Publications for ENSG00000248993 Gene

No publications were found for ENSG00000248993 Gene.

Products for ENSG00000248993 Gene

Sources for ENSG00000248993 Gene

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