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Aliases for ENSG00000238628 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000238628 Gene

  • Small Nucleolar RNA U13 5
  • SnoU13 5

External Ids for ENSG00000238628 Gene

Previous GeneCards Identifiers for ENSG00000238628 Gene

  • GC06P088431

Summaries for ENSG00000238628 Gene

GeneCards Summary for ENSG00000238628 Gene

ENSG00000238628 is an RNA Gene.

Additional gene information for ENSG00000238628 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000238628 Gene

Genomics for ENSG00000238628 Gene

Regulatory Elements for ENSG00000238628 Gene

Enhancers for ENSG00000238628 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H087755 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12.5 +35.9 35902 2 FEZF1 YY1 TCF12 GATA2 ZNF143 FOS ATF7 RUNX3 JUNB REST AKIRIN2 RARS2 ENSG00000238628 ORC3 GC06P087742 LOC101928911
GH06H087788 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.4 +69.3 69252 3 ELF3 ARID4B RARA YY1 ZNF366 SCRT2 FOS CREM SP5 CEBPB AKIRIN2 ENSG00000238628 PIR51509 LOC101928911 GC06M087798
GH06H087690 1.1 Ensembl ENCODE dbSUPER 11.8 -29.5 -29515 1 OSR2 ZNF362 ZNF687 POLR2A ZSCAN5C MYNN ZNF2 PRDM1 SPI1 SLC35A1 ENSG00000238628 RARS2 SMIM8 GC06M087700 GC06P087659
GH06H087830 1.1 Ensembl ENCODE 11.3 +110.9 110923 2 PKNOX1 FOXA2 RB1 FEZF1 RAD21 YY1 ZNF366 ZNF143 ATF7 RUNX3 AKIRIN2 ENSG00000238628 GC06M087829 RN7SL183P
GH06H087754 0.9 ENCODE dbSUPER 12.5 +34.1 34143 0 SMARCA5 BATF ZNF217 BCL11A EED IKZF2 CREM RUNX3 SPI1 ENSG00000238628 AKIRIN2 GC06P087742 LOC101928911
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000238628 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000238628 Gene

Chromosome:
6
Start:
87,720,915 bp from pter
End:
87,721,018 bp from pter
Size:
104 bases
Orientation:
Plus strand

Genomic View for ENSG00000238628 Gene

Genes around ENSG00000238628 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000238628 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000238628 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000238628 Gene

Proteins for ENSG00000238628 Gene

Post-translational modifications for ENSG00000238628 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000238628 Gene

Domains & Families for ENSG00000238628 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000238628 Gene

Function for ENSG00000238628 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000238628 Gene

Localization for ENSG00000238628 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000238628 Gene

Pathways & Interactions for ENSG00000238628 Gene

SuperPathways for ENSG00000238628 Gene

No Data Available

Interacting Proteins for ENSG00000238628 Gene

Gene Ontology (GO) - Biological Process for ENSG00000238628 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000238628 Gene

Drugs & Compounds for ENSG00000238628 Gene

No Compound Related Data Available

Transcripts for ENSG00000238628 Gene

mRNA/cDNA for ENSG00000238628 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000238628 Gene

No ASD Table

Relevant External Links for ENSG00000238628 Gene

GeneLoc Exon Structure for
ENSG00000238628

Expression for ENSG00000238628 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000238628 Gene

genes like me logo Genes that share expression patterns with ENSG00000238628: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000238628 Gene

Orthologs for ENSG00000238628 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ENSG00000238628 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia snoU13 34
  • 100 (a)
OneToOne
Species where no ortholog for ENSG00000238628 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000238628 Gene

ENSEMBL:
Gene Tree for ENSG00000238628 (if available)
TreeFam:
Gene Tree for ENSG00000238628 (if available)

Paralogs for ENSG00000238628 Gene

No data available for Paralogs for ENSG00000238628 Gene

Variants for ENSG00000238628 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000238628 Gene

Disorders for ENSG00000238628 Gene

No disorders were found for ENSG00000238628 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000238628 Gene

Publications for ENSG00000238628 Gene

No publications were found for ENSG00000238628 Gene.

Products for ENSG00000238628 Gene

Sources for ENSG00000238628 Gene

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