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Aliases for ENSG00000233340 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000233340 Gene

  • RP11-25C19.3 5

External Ids for ENSG00000233340 Gene

Previous GeneCards Identifiers for ENSG00000233340 Gene

  • GC10M114431

Summaries for ENSG00000233340 Gene

GeneCards Summary for ENSG00000233340 Gene

ENSG00000233340 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000233340 Gene

Genomics for ENSG00000233340 Gene

Regulatory Elements for ENSG00000233340 Gene

Enhancers for ENSG00000233340 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G113125 2.7 FANTOM5 Ensembl ENCODE dbSUPER 10.4 -452.1 -452134 9.0 TBP SIN3A BMI1 RAD21 YY1 SCRT2 EGR2 NFYC CEBPB REST ENSG00000233340 RNU7-165P ACSL5 TCF7L2 LOC105378489 RPS15AP30
GH10G112530 2.7 FANTOM5 Ensembl ENCODE dbSUPER 10 +144.0 144019 6.4 FOXA2 TBL1XR1 BMI1 GATA2 CBX5 RELB ETV6 CREM CBFB USF2 ENSG00000233340 ZDHHC6 VTI1A GC10P112522 ENSG00000234017
GH10G112643 2.2 VISTA ENCODE 10.4 +33.5 33453 0.9 FOXA2 ATF1 SLC30A9 GLIS2 SP5 ZHX2 MIER2 PPARG KAT8 SSRP1 ENSG00000233340 MIR4295
GH10G112947 1.7 FANTOM5 ENCODE dbSUPER 9.5 -277.4 -277420 15.2 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 FEZF1 ZNF2 ZBTB7B YY1 FOS LOC105378488 ENSG00000233340 TCF7L2 GC10P112956
GH10G112741 1.2 Ensembl ENCODE 11 -65.8 -65770 4.6 PKNOX1 FOXA2 ATF1 MLX ARID4B FEZF1 ZNF48 GATA2 FOS SP5 ENSG00000233340 TCF7L2 LOC105378488 GC10P112772 GC10P112696
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000233340 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000233340 Gene

Chromosome:
10
Start:
112,671,812 bp from pter
End:
112,677,819 bp from pter
Size:
6,008 bases
Orientation:
Minus strand

Genomic View for ENSG00000233340 Gene

Genes around ENSG00000233340 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000233340 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000233340 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000233340 Gene

Proteins for ENSG00000233340 Gene

Post-translational modifications for ENSG00000233340 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000233340 Gene

Domains & Families for ENSG00000233340 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000233340 Gene

Function for ENSG00000233340 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000233340 Gene

Localization for ENSG00000233340 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000233340 Gene

Pathways & Interactions for ENSG00000233340 Gene

SuperPathways for ENSG00000233340 Gene

No Data Available

Interacting Proteins for ENSG00000233340 Gene

Gene Ontology (GO) - Biological Process for ENSG00000233340 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000233340 Gene

Drugs & Compounds for ENSG00000233340 Gene

No Compound Related Data Available

Transcripts for ENSG00000233340 Gene

mRNA/cDNA for ENSG00000233340 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000233340 Gene

No ASD Table

Relevant External Links for ENSG00000233340 Gene

GeneLoc Exon Structure for
ENSG00000233340

Expression for ENSG00000233340 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000233340 Gene

genes like me logo Genes that share expression patterns with ENSG00000233340: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000233340 Gene

Orthologs for ENSG00000233340 Gene

Evolution for ENSG00000233340 Gene

ENSEMBL:
Gene Tree for ENSG00000233340 (if available)
TreeFam:
Gene Tree for ENSG00000233340 (if available)

No data available for Orthologs for ENSG00000233340 Gene

Paralogs for ENSG00000233340 Gene

No data available for Paralogs for ENSG00000233340 Gene

Variants for ENSG00000233340 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000233340 Gene

Disorders for ENSG00000233340 Gene

No disorders were found for ENSG00000233340 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000233340 Gene

Publications for ENSG00000233340 Gene

No publications were found for ENSG00000233340 Gene.

Products for ENSG00000233340 Gene

Sources for ENSG00000233340 Gene

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