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Aliases for ENSG00000230393 Gene

Subcategory (RNA class) for ENSG00000230393 Gene

antisense

Aliases for ENSG00000230393 Gene

  • AC092667.1 5

External Ids for ENSG00000230393 Gene

ORGUL Members for ENSG00000230393 Gene

Previous GeneCards Identifiers for ENSG00000230393 Gene

  • GC02P100721

Summaries for ENSG00000230393 Gene

GeneCards Summary for ENSG00000230393 Gene

ENSG00000230393 is an Uncategorized gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for ENSG00000230393 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for ENSG00000230393

Additional gene information for ENSG00000230393 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000230393 Gene

Genomics for ENSG00000230393 Gene

Regulatory Elements for ENSG00000230393 Gene

Enhancers for ENSG00000230393 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H100008 1.7 FANTOM5 Ensembl ENCODE dbSUPER 5.7 -92.9 -92878 6 RAD21 ZNF766 SCRT2 FOS ATF7 CEBPB ZEB2 ZNF398 ZNF589 IKZF1 ENSG00000230393 AFF3 GC02P099881
GH02H100105 1 ENCODE dbSUPER 0.7 +1.2 1222 1 SUZ12 ZSCAN4 ZIC2 ZFHX2 ZNF600 ZBTB20 EZH2 SMARCE1 L3MBTL2 ZBTB8A AFF3 ENSG00000230393
GH02H100140 1.3 Ensembl ENCODE dbSUPER 0.3 +36.9 36936 2 PKNOX1 TBL1XR1 BACH1 BATF RELA POLR2A EED ETV6 RUNX3 IKZF2 AFF3 ENSG00000230393
GH02H100067 1.3 FANTOM5 ENCODE 0.3 -36.6 -36616 1 FOXA2 ATF1 MLX ARID4B MIER2 PPARG KAT8 NFIL3 MIER3 ATF4 AFF3 ENSG00000230393 GC02P099881
GH02H100113 0.9 Ensembl ENCODE dbSUPER 0.4 +9.4 9449 2 SPI1 AFF3 ENSG00000230393
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000230393 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000230393 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000120645 -119 1201 SMARCE1 L3MBTL2 SUZ12 ZBTB8A ZNF398 ZFP69B ZNF692 ZBTB26 ZFX EZH2

Genomic Location for ENSG00000230393 Gene

Chromosome:
2
Start:
100,104,919 bp from pter
End:
100,107,504 bp from pter
Size:
2,586 bases
Orientation:
Plus strand

Genomic View for ENSG00000230393 Gene

Genes around ENSG00000230393 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000230393 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000230393 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000230393 Gene

ORGUL Member Location for ENSG00000230393 gene

No data available for RefSeq DNA sequence for ENSG00000230393 Gene

Proteins for ENSG00000230393 Gene

Post-translational modifications for ENSG00000230393 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000230393 Gene

Domains & Families for ENSG00000230393 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000230393 Gene

Function for ENSG00000230393 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000230393 Gene

Localization for ENSG00000230393 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000230393 Gene

Pathways & Interactions for ENSG00000230393 Gene

SuperPathways for ENSG00000230393 Gene

No Data Available

Interacting Proteins for ENSG00000230393 Gene

Gene Ontology (GO) - Biological Process for ENSG00000230393 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000230393 Gene

Drugs & Compounds for ENSG00000230393 Gene

No Compound Related Data Available

Transcripts for ENSG00000230393 Gene

fRNAdb Secondary structures for ENSG00000230393 Gene

  • FR392455

mRNA/cDNA for ENSG00000230393 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000230393 Gene

No ASD Table

Relevant External Links for ENSG00000230393 Gene

GeneLoc Exon Structure for
ENSG00000230393

Expression for ENSG00000230393 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000230393 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000230393 Gene

This gene is overexpressed in Prostate (x5.1).
genes like me logo Genes that share expression patterns with ENSG00000230393: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000230393 Gene

Orthologs for ENSG00000230393 Gene

Evolution for ENSG00000230393 Gene

ENSEMBL:
Gene Tree for ENSG00000230393 (if available)
TreeFam:
Gene Tree for ENSG00000230393 (if available)

No data available for Orthologs for ENSG00000230393 Gene

Paralogs for ENSG00000230393 Gene

No data available for Paralogs for ENSG00000230393 Gene

Variants for ENSG00000230393 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000230393 Gene

Disorders for ENSG00000230393 Gene

No disorders were found for ENSG00000230393 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000230393 Gene

Publications for ENSG00000230393 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for ENSG00000230393 Gene

Sources for ENSG00000230393 Gene

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