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Aliases for ENSG00000228809 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000228809 Gene

  • RP4-705D16.3 5

External Ids for ENSG00000228809 Gene

Summaries for ENSG00000228809 Gene

GeneCards Summary for ENSG00000228809 Gene

ENSG00000228809 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228809 Gene

Genomics for ENSG00000228809 Gene

Regulatory Elements for ENSG00000228809 Gene

Enhancers for ENSG00000228809 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G016526 1.2 Ensembl ENCODE 9.7 +201.7 201672 4.7 ELF3 FOXA2 CREB3L1 ARID4B KLF17 SIN3A DMAP1 RAD21 RARA FOS KIF16B ENSG00000228809 SNRPB2 GC20P016478
GH20G016578 1 Ensembl ENCODE 10.1 +150.7 150725 2.6 PKNOX1 FOXA2 NFIB INSM2 FEZF1 ZIC2 POLR2A ZSCAN5C KLF8 MAFK KIF16B SNRPB2 ENSG00000228809 ENSG00000275728 ENSG00000273998
GH20G016541 0.5 ENCODE 10.4 +189.5 189518 0.2 JUND HNF4A NR2F2 GABPA YY1 KIF16B ENSG00000228809 SNRPB2 GC20P016478
GH20G016532 0.4 ENCODE 9.7 +197.6 197559 1.4 PBX2 HLF KIF16B SNRPB2 ENSG00000228809 GC20P016478
GH20G016760 0.2 ENCODE 11.3 -28.4 -28363 0.2 SNRPB2 ENSG00000228809 OTOR ENSG00000236985
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000228809 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000228809 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000135093 747 1600 HDGF PKNOX1 CREB3L1 ARNT ZFP64 WRNIP1 ARID4B SIN3A DMAP1 ZNF2

Genomic Location for ENSG00000228809 Gene

Chromosome:
20
Start:
16,714,844 bp from pter
End:
16,730,948 bp from pter
Size:
16,105 bases
Orientation:
Minus strand

Genomic View for ENSG00000228809 Gene

Genes around ENSG00000228809 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228809 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228809 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228809 Gene

Proteins for ENSG00000228809 Gene

Post-translational modifications for ENSG00000228809 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228809 Gene

Domains & Families for ENSG00000228809 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228809 Gene

Function for ENSG00000228809 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228809 Gene

Localization for ENSG00000228809 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000228809 Gene

Pathways & Interactions for ENSG00000228809 Gene

SuperPathways for ENSG00000228809 Gene

No Data Available

Interacting Proteins for ENSG00000228809 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228809 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228809 Gene

Drugs & Compounds for ENSG00000228809 Gene

No Compound Related Data Available

Transcripts for ENSG00000228809 Gene

mRNA/cDNA for ENSG00000228809 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228809 Gene

No ASD Table

Relevant External Links for ENSG00000228809 Gene

GeneLoc Exon Structure for
ENSG00000228809

Expression for ENSG00000228809 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228809 Gene

genes like me logo Genes that share expression patterns with ENSG00000228809: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228809 Gene

Orthologs for ENSG00000228809 Gene

Evolution for ENSG00000228809 Gene

ENSEMBL:
Gene Tree for ENSG00000228809 (if available)
TreeFam:
Gene Tree for ENSG00000228809 (if available)

No data available for Orthologs for ENSG00000228809 Gene

Paralogs for ENSG00000228809 Gene

No data available for Paralogs for ENSG00000228809 Gene

Variants for ENSG00000228809 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000228809 Gene

Disorders for ENSG00000228809 Gene

No disorders were found for ENSG00000228809 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228809 Gene

Publications for ENSG00000228809 Gene

No publications were found for ENSG00000228809 Gene.

Products for ENSG00000228809 Gene

Sources for ENSG00000228809 Gene

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