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Aliases for ENSG00000228616 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000228616 Gene

  • AF274858.2 5

External Ids for ENSG00000228616 Gene

Previous GeneCards Identifiers for ENSG00000228616 Gene

  • GC0XP152876

Summaries for ENSG00000228616 Gene

GeneCards Summary for ENSG00000228616 Gene

ENSG00000228616 is an RNA Gene.

Additional gene information for ENSG00000228616 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228616 Gene

Genomics for ENSG00000228616 Gene

Regulatory Elements for ENSG00000228616 Gene

Enhancers for ENSG00000228616 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH153610 0.9 ENCODE 0.7 +0.1 62 1 MLX ZSCAN4 ARID4B SIN3A BMI1 ZNF2 ZSCAN9 RAD21 RARA YY1 HCFC1 ENSG00000228616 DUSP9
GH0XH153609 0.9 ENCODE 0.7 -0.7 -674 0 RB1 MLX ZSCAN4 ARID4B SIN3A ZNF2 ZSCAN9 RAD21 RARA GLIS2 HCFC1 DUSP9 LOC105373384 ENSG00000228616
GH0XH153621 1.5 FANTOM5 ENCODE dbSUPER 0.4 +14.6 14632 7 FOXA2 MLX ZFP64 ARID4B DMAP1 YY1 PAF1 SP5 ZHX2 MXD4 DUSP9 ZNF185 ABCD1 PDZD4 ATP2B3 ENSG00000228616
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000228616 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000228616 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000249567 -394 601 ELF3 RB1 MLX ZSCAN4 ARID4B SIN3A BMI1 ZNF2 ZSCAN9 RAD21

Genomic Location for ENSG00000228616 Gene

Chromosome:
X
Start:
153,610,694 bp from pter
End:
153,612,925 bp from pter
Size:
2,232 bases
Orientation:
Plus strand

Genomic View for ENSG00000228616 Gene

Genes around ENSG00000228616 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228616 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228616 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228616 Gene

Proteins for ENSG00000228616 Gene

Post-translational modifications for ENSG00000228616 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228616 Gene

Domains & Families for ENSG00000228616 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228616 Gene

Function for ENSG00000228616 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228616 Gene

Localization for ENSG00000228616 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228616 Gene

Pathways & Interactions for ENSG00000228616 Gene

SuperPathways for ENSG00000228616 Gene

No Data Available

Interacting Proteins for ENSG00000228616 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228616 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228616 Gene

Drugs & Compounds for ENSG00000228616 Gene

No Compound Related Data Available

Transcripts for ENSG00000228616 Gene

mRNA/cDNA for ENSG00000228616 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228616 Gene

No ASD Table

Relevant External Links for ENSG00000228616 Gene

GeneLoc Exon Structure for
ENSG00000228616

Expression for ENSG00000228616 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228616 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228616 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x7.1), Brain - Amygdala (x5.4), Brain - Anterior cingulate cortex (BA24) (x5.4), Brain - Substantia nigra (x5.1), Brain - Putamen (basal ganglia) (x4.5), and Brain - Hippocampus (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000228616: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228616 Gene

Orthologs for ENSG00000228616 Gene

Evolution for ENSG00000228616 Gene

ENSEMBL:
Gene Tree for ENSG00000228616 (if available)
TreeFam:
Gene Tree for ENSG00000228616 (if available)

No data available for Orthologs for ENSG00000228616 Gene

Paralogs for ENSG00000228616 Gene

No data available for Paralogs for ENSG00000228616 Gene

Variants for ENSG00000228616 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000228616 Gene

Disorders for ENSG00000228616 Gene

No disorders were found for ENSG00000228616 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228616 Gene

Publications for ENSG00000228616 Gene

No publications were found for ENSG00000228616 Gene.

Products for ENSG00000228616 Gene

Sources for ENSG00000228616 Gene

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