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Aliases for ENSG00000228478 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000228478 Gene

  • AL138885.2 5

External Ids for ENSG00000228478 Gene

Previous GeneCards Identifiers for ENSG00000228478 Gene

  • GC06M010424

Summaries for ENSG00000228478 Gene

GeneCards Summary for ENSG00000228478 Gene

ENSG00000228478 is an RNA Gene.

Additional gene information for ENSG00000228478 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228478 Gene

Genomics for ENSG00000228478 Gene

Regulatory Elements for ENSG00000228478 Gene

Enhancers for ENSG00000228478 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H010382 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +42.7 42727 2.7 TBP SUZ12 MAX ZKSCAN1 E2F1 GATA3 POLR2A E2F6 MAFK EZH2 TFAP2A TFAP2A-AS1 ENSG00000228478 LOC442161
GH06H010886 1.1 ENCODE 14.6 -460.9 -460924 1.9 PKNOX1 ARNT SIN3A FEZF1 ZNF2 ZNF766 CBX5 ZNF548 SP3 ZC3H11A SYCP2L LOC100422564 LINC02522 MIR5689HG ENSG00000228478 MRPL48P1 ENSG00000242753 ENSG00000233656 RNA5SP203 GC06M010903
GH06H010422 1 dbSUPER 15.3 +2.9 2940 1.8 ZNF133 SIN3A FEZF1 ZNF2 GLIS2 ZNF302 KLF7 TSHZ1 ZNF488 ZSCAN16 ENSG00000228478 MIR5689HG MRPL48P1 LINC02522 LOC100422564 ENSG00000233656 RNA5SP203 TFAP2A
GH06H010449 1.1 Ensembl ENCODE 11.5 -25.7 -25651 4.2 TBP ATF1 RAD21 RFX5 RCOR1 FOS ATF7 CREM EGR2 SMARCC1 ENSG00000228478 TFAP2A TFAP2A-AS1 GCNT2 MRPL48P1 MIR5689
GH06H010375 0.2 dbSUPER 12.4 +50.4 50361 1 TFAP2A-AS1 TFAP2A ENSG00000228478 LOC442161
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000228478 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000228478 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000192995 -324 601 GTF2F1 CTCF TFAP4 SUZ12 ZFP64 YY1 E2F1 POLR2A RCOR1 IKZF2

Genomic Locations for ENSG00000228478 Gene

Genomic Locations for ENSG00000228478 Gene
chr6:10,423,140-10,426,176
(GRCh38/hg38)
Size:
3,037 bases
Orientation:
Minus strand
chr6:10,423,373-10,426,409
(GRCh37/hg19)

Genomic View for ENSG00000228478 Gene

Genes around ENSG00000228478 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228478 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228478 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228478 Gene

Proteins for ENSG00000228478 Gene

Post-translational modifications for ENSG00000228478 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228478 Gene

Domains & Families for ENSG00000228478 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228478 Gene

Function for ENSG00000228478 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228478 Gene

Localization for ENSG00000228478 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228478 Gene

Pathways & Interactions for ENSG00000228478 Gene

SuperPathways for ENSG00000228478 Gene

No Data Available

Interacting Proteins for ENSG00000228478 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228478 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228478 Gene

Drugs & Compounds for ENSG00000228478 Gene

No Compound Related Data Available

Transcripts for ENSG00000228478 Gene

mRNA/cDNA for ENSG00000228478 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228478 Gene

No ASD Table

Relevant External Links for ENSG00000228478 Gene

GeneLoc Exon Structure for
ENSG00000228478

Expression for ENSG00000228478 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228478 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228478 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with ENSG00000228478: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228478 Gene

Orthologs for ENSG00000228478 Gene

Evolution for ENSG00000228478 Gene

ENSEMBL:
Gene Tree for ENSG00000228478 (if available)
TreeFam:
Gene Tree for ENSG00000228478 (if available)

No data available for Orthologs for ENSG00000228478 Gene

Paralogs for ENSG00000228478 Gene

No data available for Paralogs for ENSG00000228478 Gene

Variants for ENSG00000228478 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000228478 Gene

Disorders for ENSG00000228478 Gene

No disorders were found for ENSG00000228478 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228478 Gene

Publications for ENSG00000228478 Gene

No publications were found for ENSG00000228478 Gene.

Products for ENSG00000228478 Gene

Sources for ENSG00000228478 Gene

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